CuGenDBv2

Gene ID	PI0017509
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein E6
Genome location	chr04:1973887..1975259
RNA-Seq Expression	PI0017509
Synteny	PI0017509
Gene Ontology terms	NA
InterPro domains	IPR040290 - Protein E6-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052668.1 protein E6 [Cucumis melo var. makuwa]

2.6e-139

88.85

Show/hide

Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNV---DNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPN
        MASSPKLFTSILIL+ LFIQIHARESKYFFSKIPNNNV   +NNFDAKETQIPNDE VDPLTNPEKTTTSPQDQQPNFIPQTQDN YGLYGHESGQ PPN
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNV---DNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPN

Query:  SDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
        SDSKFFS    ENGRSFTTT +Y++N+NKFRNDVVSNYK ESEEYYNY+D  NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
Subjt:  SDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP

Query:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEEP
        LYDQGKYDNFYNSNNG G    DNNNNGNN+VRQGMSDTRFMENGKYYYDL+REPHHYSRSRGYFG    NNNN NSYEYGNSMGRYQNQNDEAEFQEEP
Subjt:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEEP

Query:  DEFVP
        DEFVP
Subjt:  DEFVP

KAE8647698.1 hypothetical protein Csa_002947 [Cucumis sativus]

2.9e-130

85.2

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Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQ-DQQPNFIPQTQDNSYGLYGHESGQFPPNSD
        MASSP LFTSILIL+  F+QIHARESKYFFSKIPNNNVDNNFDAKETQI NDEKVDPLTNPEKTTTS Q +QQPNFIPQTQDN YGLYGHESGQ PPNS+
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQ-DQQPNFIPQTQDNSYGLYGHESGQFPPNSD

Query:  SKFFS----ENGRSFTTTASY--EDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
        SKFFS    ENGRSFTTT +Y  +D+NNKF+NDVVSNYK ESEEYYNYD+  NNNNFQTFENS SKPY+NSFYYNKDLYDNGRQSF N RLSRDDYTTTP
Subjt:  SKFFS----ENGRSFTTTASY--EDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP

Query:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR-SRGYFG--NNNNGNSYEYGNSMGRYQNQNDEAEFQEEPD
        LYDQGKYDNFY++N  R   D++NN+NGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR SRGYFG  NNNNGNSY+YGNSMGRYQNQNDEAEFQEEPD
Subjt:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR-SRGYFG--NNNNGNSYEYGNSMGRYQNQNDEAEFQEEPD

Query:  EFVP
        EFVP
Subjt:  EFVP

XP_004134947.1 protein E6 [Cucumis sativus]

2.9e-130

85.2

Show/hide

Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQ-DQQPNFIPQTQDNSYGLYGHESGQFPPNSD
        MASSP LFTSILIL+  F+QIHARESKYFFSKIPNNNVDNNFDAKETQI NDEKVDPLTNPEKTTTS Q +QQPNFIPQTQDN YGLYGHESGQ PPNS+
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQ-DQQPNFIPQTQDNSYGLYGHESGQFPPNSD

Query:  SKFFS----ENGRSFTTTASY--EDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
        SKFFS    ENGRSFTTT +Y  +D+NNKF+NDVVSNYK ESEEYYNYD+  NNNNFQTFENS SKPY+NSFYYNKDLYDNGRQSF N RLSRDDYTTTP
Subjt:  SKFFS----ENGRSFTTTASY--EDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP

Query:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR-SRGYFG--NNNNGNSYEYGNSMGRYQNQNDEAEFQEEPD
        LYDQGKYDNFY++N  R   D++NN+NGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR SRGYFG  NNNNGNSY+YGNSMGRYQNQNDEAEFQEEPD
Subjt:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR-SRGYFG--NNNNGNSYEYGNSMGRYQNQNDEAEFQEEPD

Query:  EFVP
        EFVP
Subjt:  EFVP

XP_008441080.1 PREDICTED: protein E6 [Cucumis melo]

8.8e-140

88.89

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Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVD----NNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPP
        MASSPKLFTSILIL+ LFIQIHARESKYFFSKIPNNNVD    NNFDAKETQIPNDE VDPLTNPEKTTTSPQDQQPNFIPQTQDN YGLYGHESGQ PP
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVD----NNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPP

Query:  NSDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTT
        NSDSKFFS    ENGRSFTTT +Y++N+NKFRNDVVSNYK ESEEYYNY+D  NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTT
Subjt:  NSDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTT

Query:  PLYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEE
        PLYDQGKYDNFYNSNNG G    DNNNNGNN+VRQGMSDTRFMENGKYYYDL+REPHHYSRSRGYFG    NNNN NSYEYGNSMGRYQNQNDEAEFQEE
Subjt:  PLYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEE

Query:  PDEFVP
        PDEFVP
Subjt:  PDEFVP

XP_038883950.1 protein E6-like [Benincasa hispida]

6.4e-122

82.65

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Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDS
        MASSPKL TSIL+LS L IQIHARESKYFFSK+PNNNVD NFDAKETQ+PN+ K+DPLTNPEKTTT+PQDQ+PNFIPQTQDNSYGLYGHESGQ PPNSD+
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDS

Query:  KFFSENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKYDN
        K FS  GR FTTT +  DNNN +RND V N KPESEEYYNY++N+ N + FENS SKPYENSFYYNKDLYDNG+QSFQNTRLS+DDY TTPLYDQGKYDN
Subjt:  KFFSENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKYDN

Query:  FYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNNNNG--NSYEYGNSMGRYQNQNDEAEFQEEPDEFVP
        FY++NNGR  G  +NN+NGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNNNN   N+YEYGNSMGRYQNQNDEAEFQEEP+EFVP
Subjt:  FYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNNNNG--NSYEYGNSMGRYQNQNDEAEFQEEPDEFVP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLJ0 Uncharacterized protein

1.4e-130

85.2

Show/hide

Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQ-DQQPNFIPQTQDNSYGLYGHESGQFPPNSD
        MASSP LFTSILIL+  F+QIHARESKYFFSKIPNNNVDNNFDAKETQI NDEKVDPLTNPEKTTTS Q +QQPNFIPQTQDN YGLYGHESGQ PPNS+
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQ-DQQPNFIPQTQDNSYGLYGHESGQFPPNSD

Query:  SKFFS----ENGRSFTTTASY--EDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
        SKFFS    ENGRSFTTT +Y  +D+NNKF+NDVVSNYK ESEEYYNYD+  NNNNFQTFENS SKPY+NSFYYNKDLYDNGRQSF N RLSRDDYTTTP
Subjt:  SKFFS----ENGRSFTTTASY--EDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP

Query:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR-SRGYFG--NNNNGNSYEYGNSMGRYQNQNDEAEFQEEPD
        LYDQGKYDNFY++N  R   D++NN+NGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR SRGYFG  NNNNGNSY+YGNSMGRYQNQNDEAEFQEEPD
Subjt:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSR-SRGYFG--NNNNGNSYEYGNSMGRYQNQNDEAEFQEEPD

Query:  EFVP
        EFVP
Subjt:  EFVP

A0A1S3B2M6 protein E6

4.3e-140

88.89

Show/hide

Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVD----NNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPP
        MASSPKLFTSILIL+ LFIQIHARESKYFFSKIPNNNVD    NNFDAKETQIPNDE VDPLTNPEKTTTSPQDQQPNFIPQTQDN YGLYGHESGQ PP
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVD----NNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPP

Query:  NSDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTT
        NSDSKFFS    ENGRSFTTT +Y++N+NKFRNDVVSNYK ESEEYYNY+D  NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTT
Subjt:  NSDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTT

Query:  PLYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEE
        PLYDQGKYDNFYNSNNG G    DNNNNGNN+VRQGMSDTRFMENGKYYYDL+REPHHYSRSRGYFG    NNNN NSYEYGNSMGRYQNQNDEAEFQEE
Subjt:  PLYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEE

Query:  PDEFVP
        PDEFVP
Subjt:  PDEFVP

A0A5D3CMI3 Protein E6

1.2e-139

88.85

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Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNV---DNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPN
        MASSPKLFTSILIL+ LFIQIHARESKYFFSKIPNNNV   +NNFDAKETQIPNDE VDPLTNPEKTTTSPQDQQPNFIPQTQDN YGLYGHESGQ PPN
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNV---DNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPN

Query:  SDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
        SDSKFFS    ENGRSFTTT +Y++N+NKFRNDVVSNYK ESEEYYNY+D  NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP
Subjt:  SDSKFFS----ENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDD--NNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTP

Query:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEEP
        LYDQGKYDNFYNSNNG G    DNNNNGNN+VRQGMSDTRFMENGKYYYDL+REPHHYSRSRGYFG    NNNN NSYEYGNSMGRYQNQNDEAEFQEEP
Subjt:  LYDQGKYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFG----NNNNGNSYEYGNSMGRYQNQNDEAEFQEEP

Query:  DEFVP
        DEFVP
Subjt:  DEFVP

A0A6J1EH17 protein E6-like

2.3e-85

67.72

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Query:  SILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSP--QDQQPNFIPQTQDNSYGLYGHESGQFPPNSDSKFFSENG
        S L+L+ LF Q+HARES +FFSK+PNN     F  KETQIPN  + DPLT+P+KT+ +P  QDQ PNF+PQTQDN+YGLYGHESGQ PPNSD  F  +  
Subjt:  SILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSP--QDQQPNFIPQTQDNSYGLYGHESGQFPPNSDSKFFSENG

Query:  RSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNG
                  D+N   RND V  YK ESEE   YDDN+N    F+NSN+KPYENSFYYNKDLYDNGRQSF+NTR SR+DYTTTPLY+Q KY N  + ++ 
Subjt:  RSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNG

Query:  RGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNNNNGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP
              +NNNN NNVVRQGMSDTRFMENGKYYYDL+REPHHYSRSRGYF NNNNGN+YEYGNSMGRYQNQNDEAEFQEE D+FVP
Subjt:  RGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNNNNGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP

A0A6J1IU58 protein E6-like

1.4e-90

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Query:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPN-DEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSD
        MASS KL  S L+L+ LFIQ+HARES +FFSK+PNN     F  KETQIPN +E+ DPLTNP+KT+ +PQD  PNF+PQTQDN+YGLYGHESGQ PPNSD
Subjt:  MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPN-DEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSD

Query:  SKFFSENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKY-
          F  +            D+N   RND VS YK ESEE+Y   DN+N    F+N N+KPYENSFYYNKDLYDNGRQSF+NTRLSR+DYTTTPLY+Q KY 
Subjt:  SKFFSENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKY-

Query:  ----DNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYF--GNNNNGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP
            +NFY ++N        NNNN NNVVRQGMSDTRFMENGKYYYDL+REPHHYSRSRGYF   NNNNGN+Y+YGNSMGRYQNQNDEAEFQEE DEFVP
Subjt:  ----DNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYF--GNNNNGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP

SwissProt top hits

e value

%identity

Alignment

Q01197 Protein E6

1.4e-23

38.46

Show/hide

Query:  MASSPKLFT-SILILSFLF-IQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNS
        MASSPKLF+ SIL L  LF +QIHARE   +FSK P  N++     KET    ++K +  T   +TT  P++Q+P FIP+TQ N YGLYGHESG   P  
Subjt:  MASSPKLFT-SILILSFLF-IQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNS

Query:  DSKFFSENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKY
                  SFTT  +YE      R      + P+ E Y +  +++NN            ++++YYNK+ Y++ +Q      +  +   +T    + + 
Subjt:  DSKFFSENGRSFTTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKY

Query:  DNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNRE----PHHYSRSRGYFGNNN-NGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP
        +N+YN NNG   G+           +QGMSDTR++ENGKYYYD+  E    P+ +  SRG    N  N N Y   N+MGRY +QN E EF+E  +EF P
Subjt:  DNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNRE----PHHYSRSRGYFGNNN-NGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP

Arabidopsis top hits

e value

%identity

Alignment

AT1G28400.1 unknown protein

2.3e-13

29.79

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Query:  FTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTT-------SPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDS
        FT++++LS    QIHAR+S YFF K         F  +  +  N     PL   EKTT          Q+Q P F+P++  N YGLYGHE+     N + 
Subjt:  FTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTT-------SPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDS

Query:  KFFSENGRS-------FTTTASYEDNNNKFRNDVVSNYKPESEEY----YNYDDNNNNFQTFENSNSKPYENSFY---YNKDLYDNGRQSFQNTRLSRDD
        + F+ N ++         +T S  +    F N+   NY  ++E Y    YN ++ NNN   ++ +  + + N+ Y   Y K+ ++N   +  N     D+
Subjt:  KFFSENGRS-------FTTTASYEDNNNKFRNDVVSNYKPESEEY----YNYDDNNNNFQTFENSNSKPYENSFY---YNKDLYDNGRQSFQNTRLSRDD

Query:  YTTTPLYDQGKYDNFYNSNNGRGGGDDDNNNN-----GNNVVRQGMSDTRFMENGKYYYDL---NREPHHYSRSR-----GYFGN-----NNNGNSYEYG
              + +   DN  N  N    G +           +N+ RQGMSDTRFME G YYYDL       H+Y +S      GY+ +     N    SY YG
Subjt:  YTTTPLYDQGKYDNFYNSNNGRGGGDDDNNNN-----GNNVVRQGMSDTRFMENGKYYYDL---NREPHHYSRSR-----GYFGN-----NNNGNSYEYG

Query:  NS------MGRYQNQNDEAEFQEEPDEFV
        N+         Y ++ ++    E+P+EFV
Subjt:  NS------MGRYQNQNDEAEFQEEPDEFV

AT2G33850.1 unknown protein

4.5e-09

30.54

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Query:  ASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDSK
        ++S  LF  +L L     QI AR S Y F K         F  ++ +  N   + P+   EK    P DQ P FIPQ+ +N YGLYGHE+          
Subjt:  ASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDSK

Query:  FFSENGRSFTTTASYEDNNN---KFRNDVVSNYKPESEEYYNYDDNNNNFQTF--ENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQG
          ++N         YEDN N    F    +S      E Y NY ++          N ++  YENS  Y  D  DN            D Y      D  
Subjt:  FFSENGRSFTTTASYEDNNN---KFRNDVVSNYKPESEEYYNYDDNNNNFQTF--ENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQG

Query:  KYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHH-YSRSRGYFGNNNNGNSYEYGNSMGRY-QNQNDEAEFQEEPDEFVP
         Y+N       +   +       NNV RQGMSDTR+M NGKYYYDL+ + +H       Y+     G + +  N    Y  NQ  E   +E+ D+  P
Subjt:  KYDNFYNSNNGRGGGDDDNNNNGNNVVRQGMSDTRFMENGKYYYDLNREPHH-YSRSRGYFGNNNNGNSYEYGNSMGRY-QNQNDEAEFQEEPDEFVP

Sequences

Show/hide sequences

CDS sequence

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ATGGCTTCCTCACCCAAATTATTCACTTCTATTCTCATTCTCAGTTTTTTATTCATTCAAATCCATGCAAGGGAAAGCAAGTACTTCTTCAGCAAAATACCCAACAACAA
TGTTGACAACAACTTTGATGCCAAAGAAACCCAAATCCCCAACGATGAGAAAGTTGATCCTTTAACAAATCCAGAAAAAACCACCACTTCCCCACAAGATCAACAGCCCA
ATTTCATCCCTCAAACCCAAGACAACAGCTACGGTCTATACGGTCACGAATCCGGTCAGTTCCCCCCTAATTCCGACAGCAAATTCTTCTCCGAAAACGGCCGCTCTTTT
ACCACTACCGCCTCCTACGAGGACAACAACAACAAATTCAGAAATGATGTCGTTTCTAATTACAAACCTGAGTCAGAGGAGTACTACAACTACGACGACAACAACAACAA
TTTCCAAACTTTTGAAAATAGCAACTCAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAACGGACGACAAAGCTTCCAAAACACCCGCCTTTCCC
GAGATGATTACACTACAACTCCTCTGTACGACCAGGGAAAATACGACAACTTCTACAATAGCAACAACGGCCGCGGCGGCGGCGACGACGACAACAATAACAATGGGAAT
AATGTGGTGCGACAAGGAATGAGCGACACGAGATTCATGGAGAATGGAAAGTACTATTATGACCTCAACAGGGAGCCACACCATTACAGCAGATCCAGGGGCTATTTTGG
AAACAACAACAACGGGAATTCATACGAGTACGGCAATTCCATGGGAAGGTATCAGAATCAAAATGATGAAGCAGAATTTCAGGAGGAACCCGATGAGTTCGTGCCATAA

mRNA sequence

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CTATCCCAACTCTCCTTCACTATACACACAACACAACGCAACACACACAGTTGAAACAACACTCACACAATACCTTTAATCCCTCTCATACCTTGTCCCTAGCTTCTTGT
TTCAAGCCAAGCCATTCATGGCTTCCTCACCCAAATTATTCACTTCTATTCTCATTCTCAGTTTTTTATTCATTCAAATCCATGCAAGGGAAAGCAAGTACTTCTTCAGC
AAAATACCCAACAACAATGTTGACAACAACTTTGATGCCAAAGAAACCCAAATCCCCAACGATGAGAAAGTTGATCCTTTAACAAATCCAGAAAAAACCACCACTTCCCC
ACAAGATCAACAGCCCAATTTCATCCCTCAAACCCAAGACAACAGCTACGGTCTATACGGTCACGAATCCGGTCAGTTCCCCCCTAATTCCGACAGCAAATTCTTCTCCG
AAAACGGCCGCTCTTTTACCACTACCGCCTCCTACGAGGACAACAACAACAAATTCAGAAATGATGTCGTTTCTAATTACAAACCTGAGTCAGAGGAGTACTACAACTAC
GACGACAACAACAACAATTTCCAAACTTTTGAAAATAGCAACTCAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATCTTTACGACAACGGACGACAAAGCTTCCA
AAACACCCGCCTTTCCCGAGATGATTACACTACAACTCCTCTGTACGACCAGGGAAAATACGACAACTTCTACAATAGCAACAACGGCCGCGGCGGCGGCGACGACGACA
ACAATAACAATGGGAATAATGTGGTGCGACAAGGAATGAGCGACACGAGATTCATGGAGAATGGAAAGTACTATTATGACCTCAACAGGGAGCCACACCATTACAGCAGA
TCCAGGGGCTATTTTGGAAACAACAACAACGGGAATTCATACGAGTACGGCAATTCCATGGGAAGGTATCAGAATCAAAATGATGAAGCAGAATTTCAGGAGGAACCCGA
TGAGTTCGTGCCATAAATTTTCGTTCCACTTCTAAATTAAGAAAAAAAAATCATATATTTAATTTAGTTGTGCATGCGAACTATATATCTCCTCCTCTCCTAGTTTTACG
TTTGCTTAATTCACATCATATTTAATTGTGCTTTTTCTTCACAAAACCAAAAATCTCAGTCCACCAAAGATTAAATTATATATTTTAGTGTCTGCTTTTTTACTTTTATA
TATATATTTGTGGGTTAAGTGGTAACTTGTTTATCTTTTATGTTTTTGGGGTCTGGAACAATATGACATATAAAATGATATACGAATGTTTTTGGCTTTTTCCATTATAT
CAATGGGTTATTGCAATAAAATAAATGTACATTGTTCTAGTATTATAGCTTTA

Protein sequence

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MASSPKLFTSILILSFLFIQIHARESKYFFSKIPNNNVDNNFDAKETQIPNDEKVDPLTNPEKTTTSPQDQQPNFIPQTQDNSYGLYGHESGQFPPNSDSKFFSENGRSF
TTTASYEDNNNKFRNDVVSNYKPESEEYYNYDDNNNNFQTFENSNSKPYENSFYYNKDLYDNGRQSFQNTRLSRDDYTTTPLYDQGKYDNFYNSNNGRGGGDDDNNNNGN
NVVRQGMSDTRFMENGKYYYDLNREPHHYSRSRGYFGNNNNGNSYEYGNSMGRYQNQNDEAEFQEEPDEFVP

PI0017509 (gene) of Melon (PI 482460) v1 genome