; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017510 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017510
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:12918502..12919044
RNA-Seq ExpressionPI0017510
SyntenyPI0017510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]2.2e-4058.05Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        MT  V +QLMGF NV+D+W+ATQD FGV SRAE+DFL QM Q TRK + KMEEYL  MK++ D+L QV S VP R+L+SQVLLGLDE+YN V  +IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLEHQNSQ---RSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQN
        +ISWLDMQSKLLIF+K L+HQN+Q   +  G+I  S   N+AQ       R+ SN+ +   NR  F+GQRG+ N
Subjt:  NISWLDMQSKLLIFDKRLEHQNSQ---RSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQN

KGN65684.1 hypothetical protein Csa_019689 [Cucumis sativus]5.8e-4961.33Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        +T +VVVQL+GF N KDMWEAT D FGV SRAE+DFL Q FQ TRK +  ME+YL  MK++AD+L Q ES +P R+L+SQVLLGLDE+YNPV  +IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQH-YQNNNRTSFNGQRGSQNFNGGRGRGRG
         ISWLDMQSKLLIF+KRL+HQNSQ++ G+I  + T N+AQSR   + R S  H +  NNR +F G RG  N + G GRGRG
Subjt:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQH-YQNNNRTSFNGQRGSQNFNGGRGRGRG

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.9e-4458.19Show/hide
Query:  VVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNISW
        + +QLMGF N KD+WEATQDLFGV SRAE+DFL QMFQ TRK     E+YL  MK+++D L Q  S VP R+ +SQ LLGLDE+YNPV A+IQGK  ISW
Subjt:  VVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNISW

Query:  LDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQNFNGGRGRGRG
        +DMQS+LL F+KRLEHQ++Q++T +I  +V  N+AQ+R   D R  SN  +  NNR +  GQRG  N   GRG+GRG
Subjt:  LDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQNFNGGRGRGRG

XP_031739914.1 uncharacterized protein LOC116403326 isoform X1 [Cucumis sativus]5.2e-4258.89Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        MT +V  +LMGF N K  WEAT  LFGV SRAE+DFL Q FQ TRK S KME+YL  MK++ D+LSQ  SLVP  +L+SQVLLGLDE+YN V  +IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNN-RTSFNGQRGSQNFNGGRGRGR
        NISWLDMQS+LLIF+K LEH N+QR+TG+I  +V  N+A+     + RS+N H  + N R +F+GQRG      GRGRGR
Subjt:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNN-RTSFNGQRGSQNFNGGRGRGR

XP_031739915.1 uncharacterized protein LOC116403326 isoform X2 [Cucumis sativus]5.2e-4258.89Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        MT +V  +LMGF N K  WEAT  LFGV SRAE+DFL Q FQ TRK S KME+YL  MK++ D+LSQ  SLVP  +L+SQVLLGLDE+YN V  +IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNN-RTSFNGQRGSQNFNGGRGRGR
        NISWLDMQS+LLIF+K LEH N+QR+TG+I  +V  N+A+     + RS+N H  + N R +F+GQRG      GRGRGR
Subjt:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNN-RTSFNGQRGSQNFNGGRGRGR

TrEMBL top hitse value%identityAlignment
A0A0A0LXB7 Uncharacterized protein2.8e-4961.33Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        +T +VVVQL+GF N KDMWEAT D FGV SRAE+DFL Q FQ TRK +  ME+YL  MK++AD+L Q ES +P R+L+SQVLLGLDE+YNPV  +IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQH-YQNNNRTSFNGQRGSQNFNGGRGRGRG
         ISWLDMQSKLLIF+KRL+HQNSQ++ G+I  + T N+AQSR   + R S  H +  NNR +F G RG  N + G GRGRG
Subjt:  NISWLDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQH-YQNNNRTSFNGQRGSQNFNGGRGRGRG

A0A5A7SIT7 Uncharacterized protein1.1e-4058.05Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        MT  V +QLMGF NV+D+W+ATQD FGV SRAE+DFL QM Q TRK + KMEEYL  MK++ D+L QV S VP R+L+SQVLLGLDE+YN V  +IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLEHQNSQ---RSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQN
        +ISWLDMQSKLLIF+K L+HQN+Q   +  G+I  S   N+AQ       R+ SN+ +   NR  F+GQRG+ N
Subjt:  NISWLDMQSKLLIFDKRLEHQNSQ---RSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQN

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-949.3e-4558.19Show/hide
Query:  VVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNISW
        + +QLMGF N KD+WEATQDLFGV SRAE+DFL QMFQ TRK     E+YL  MK+++D L Q  S VP R+ +SQ LLGLDE+YNPV A+IQGK  ISW
Subjt:  VVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNISW

Query:  LDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQNFNGGRGRGRG
        +DMQS+LL F+KRLEHQ++Q++T +I  +V  N+AQ+R   D R  SN  +  NNR +  GQRG  N   GRG+GRG
Subjt:  LDMQSKLLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRS-SNQHYQNNNRTSFNGQRGSQNFNGGRGRGRG

A0A5D3E3L7 Uncharacterized protein5.9e-3161.34Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        M   V +QLMGF   KD+WEA Q+LFG+ SRAE+ FL   FQ TR+ + KME+YL  MK +AD+L Q  S VP R L+SQVLLGLDE+YNPV+A+IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKLLIFDKRLE
        +ISWLDMQS+LLIF+  +E
Subjt:  NISWLDMQSKLLIFDKRLE

A0A6J1D5J0 uncharacterized protein LOC1110175019.4e-2957.14Show/hide
Query:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS
        MT +V  Q+MG++N  D+W A Q+LFGV S+AE+D+L Q+FQ TRK S+KM ++L  MKSHAD+L Q  S VPTRSL+SQVLLGLDE YNPV A IQGK 
Subjt:  MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKS

Query:  NISWLDMQSKL--LIFDKRLEHQNSQ
         ISW +MQ++   +    + ++QNSQ
Subjt:  NISWLDMQSKL--LIFDKRLEHQNSQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)5.5e-0529.09Show/hide
Query:  KDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNI-SWLDMQSKLLIF
        +D+W + ++LF     A         + T    + + EY   +KS +D L+ V+S +  R LV  +L GL E Y+ +  +I+ KS   S+ + +S LL+ 
Subjt:  KDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNI-SWLDMQSKLLIF

Query:  DKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNNRTSFNGQRGSQNFNGGRGRGR
        + RL ++ S+ S         SNV  +  P       Q Y NNN     G+   +N  GG   GR
Subjt:  DKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNNRTSFNGQRGSQNFNGGRGRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCAAAAAGTGGTTGTCCAGCTGATGGGTTTCCAAAATGTAAAGGATATGTGGGAAGCAACACAAGACCTTTTTGGAGTTCTATCGAGGGCTGAAAAAGATTTTCT
TCATCAAATGTTTCAAATAACAAGGAAAAGAAGCATGAAAATGGAGGAGTACCTGGGGACAATGAAGTCCCATGCTGACAGTCTCAGTCAAGTTGAGAGTCTTGTACCCA
CACGATCCTTAGTCTCACAAGTTCTCTTGGGTCTTGATGAGATTTACAATCCGGTTAGTGCAATCATTCAAGGTAAGTCAAACATCTCCTGGCTTGATATGCAGTCTAAA
CTCCTTATCTTTGACAAACGTCTTGAACATCAAAACTCCCAGCGAAGTACTGGAGATATTGGAGCAAGTGTAACTTCCAATGTTGCACAGAGTCGAGGACCACCAGACTT
GCGATCATCCAATCAACATTATCAGAACAACAATCGCACTTCATTCAATGGACAACGCGGTAGTCAGAATTTTAATGGTGGTAGAGGTCGTGGACGTGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCAAAAAGTGGTTGTCCAGCTGATGGGTTTCCAAAATGTAAAGGATATGTGGGAAGCAACACAAGACCTTTTTGGAGTTCTATCGAGGGCTGAAAAAGATTTTCT
TCATCAAATGTTTCAAATAACAAGGAAAAGAAGCATGAAAATGGAGGAGTACCTGGGGACAATGAAGTCCCATGCTGACAGTCTCAGTCAAGTTGAGAGTCTTGTACCCA
CACGATCCTTAGTCTCACAAGTTCTCTTGGGTCTTGATGAGATTTACAATCCGGTTAGTGCAATCATTCAAGGTAAGTCAAACATCTCCTGGCTTGATATGCAGTCTAAA
CTCCTTATCTTTGACAAACGTCTTGAACATCAAAACTCCCAGCGAAGTACTGGAGATATTGGAGCAAGTGTAACTTCCAATGTTGCACAGAGTCGAGGACCACCAGACTT
GCGATCATCCAATCAACATTATCAGAACAACAATCGCACTTCATTCAATGGACAACGCGGTAGTCAGAATTTTAATGGTGGTAGAGGTCGTGGACGTGGATGA
Protein sequenceShow/hide protein sequence
MTQKVVVQLMGFQNVKDMWEATQDLFGVLSRAEKDFLHQMFQITRKRSMKMEEYLGTMKSHADSLSQVESLVPTRSLVSQVLLGLDEIYNPVSAIIQGKSNISWLDMQSK
LLIFDKRLEHQNSQRSTGDIGASVTSNVAQSRGPPDLRSSNQHYQNNNRTSFNGQRGSQNFNGGRGRGRG