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PI0017513 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017513
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDUF667 domain-containing protein
Genome locationchr01:2424578..2428127
RNA-Seq ExpressionPI0017513
SyntenyPI0017513
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0048583 - regulation of response to stimulus (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN68165.1 hypothetical protein VITISV_008538 [Vitis vinifera]4.8e-0851.56Show/hide
Query:  MLKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        M KI+SWN RGL  + KRR+VK+ LR E PD V++ ETK++E  RR + S W     EW VL A
Subjt:  MLKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

RVW46854.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.1e-0841.05Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCVEGVDW----SPISPKEDEEFLSSVRD
        +KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A        + W     PI+P   ++F   ++D
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCVEGVDW----SPISPKEDEEFLSSVRD

RVW64408.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]3.7e-0852.38Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        +KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

RVW72662.1 hypothetical protein CK203_056563 [Vitis vinifera]2.1e-0852.38Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        +KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

RVX11537.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]6.3e-0853.23Show/hide
Query:  KIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A
Subjt:  KIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

TrEMBL top hitse value%identityAlignment
A0A0A0KTS7 DUF667 domain-containing protein1.9e-1055.07Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCV
        L++  W  RGLEG+ KRRLVKEVL QE  D V L+E+KRS+F  +RI+S WKR RV+WE    +++ CV
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCV

A0A0A0LY03 Uncharacterized protein1.0e-1178.43Show/hide
Query:  GQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        GQ+KRRLVKEVLRQE+PD VI +ETKRSEF   RI+S WKR RVEWEVLEA
Subjt:  GQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

A0A438EGK9 Transposon TX1 uncharacterized 149 kDa protein1.0e-0841.05Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCVEGVDW----SPISPKEDEEFLSSVRD
        +KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A        + W     PI+P   ++F   ++D
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCVEGVDW----SPISPKEDEEFLSSVRD

A0A438FWU5 LINE-1 retrotransposable element ORF2 protein1.8e-0852.38Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        +KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

A0A438GKF3 Reverse transcriptase domain-containing protein1.0e-0852.38Show/hide
Query:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA
        +KI+SWN RGL  + KRR+V+  L  ++PD V+L ETKR  + RR +SS WK  RVEW  L A
Subjt:  LKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAAAAATTGTGTCGTGGAACGTTAGGGGTTTGGAGGGTCAGTCTAAAAGAAGACTTGTGAAGGAGGTGCTTAGACAAGAAGATCCGGATACAGTTATTTTATTGGA
AACCAAGAGAAGTGAGTTTTATAGAAGAAGGATTTCTAGTAGTTGGAAGCGTTGGAGGGTGGAGTGGGAGGTTCTTGAGGCTGATGCTAAGCCTTGTGTGGAGGGCGTTG
ATTGGAGTCCTATCTCGCCGAAGGAGGATGAGGAGTTCTTATCCTCCGTGAGGGATTCGAGGCAAACTAGGCTTCAAGCAATTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAAAAATTGTGTCGTGGAACGTTAGGGGTTTGGAGGGTCAGTCTAAAAGAAGACTTGTGAAGGAGGTGCTTAGACAAGAAGATCCGGATACAGTTATTTTATTGGA
AACCAAGAGAAGTGAGTTTTATAGAAGAAGGATTTCTAGTAGTTGGAAGCGTTGGAGGGTGGAGTGGGAGGTTCTTGAGGCTGATGCTAAGCCTTGTGTGGAGGGCGTTG
ATTGGAGTCCTATCTCGCCGAAGGAGGATGAGGAGTTCTTATCCTCCGTGAGGGATTCGAGGCAAACTAGGCTTCAAGCAATTCAATGA
Protein sequenceShow/hide protein sequence
MLKIVSWNVRGLEGQSKRRLVKEVLRQEDPDTVILLETKRSEFYRRRISSSWKRWRVEWEVLEADAKPCVEGVDWSPISPKEDEEFLSSVRDSRQTRLQAIQ