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PI0017608 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017608
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr03:13431890..13433489
RNA-Seq ExpressionPI0017608
SyntenyPI0017608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]2.0e-1541.1Show/hide
Query:  EATEFFEEV--EVDNLNKEVVLNFLNDRVRKRK-EAYMKRTKE----VCRRKDEHFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISG
        E  E  EE+  EV+ +++E++    + R R RK  + MKR +E    +   KD +   A  +AFGW+KFFKG +K+++ VV KFYA+  N  E+   +  
Subjt:  EATEFFEEV--EVDNLNKEVVLNFLNDRVRKRK-EAYMKRTKE----VCRRKDEHFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISG

Query:  KTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLY
        K+  F+ EAIN LY  P D E P    + +  K+ A EALE IA  GA + ITPTGK   LLY
Subjt:  KTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLY

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]4.4e-1835.88Show/hide
Query:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP-----------TGKS-----
        K+++ VV KFY  KFN  +  + I  +   F+ E IN LY  PND E  GQE V   TK +A+EAL+V+A PG   ++ P           T K+     
Subjt:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP-----------TGKS-----

Query:  -------------------AMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL
                            ++LYCI+ KK +NL  +I  +IL W   PK A+ FPS +E LC+K +P L
Subjt:  -------------------AMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL

TYJ97633.1 hypothetical protein E5676_scaffold469G00170 [Cucumis melo var. makuwa]1.0e-1434.04Show/hide
Query:  HFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP
        +F+++ I+AFGW KFF G TK  I                                  LY++ ND   P  E +  PTK++ARE L        AW    
Subjt:  HFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP

Query:  TGKSAMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTLGDTATEGA
         G  A     I      NLG +I  +ILAW   PKGA SFPS +E L +K +P L  +    I   + NQ +LNR+IT H  KE E   KTLG       
Subjt:  TGKSAMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTLGDTATEGA

Query:  TQADRKRKAP-----AAASTPQPKVKKPKVDAAKQ
         +       P       AST     KK KVDA KQ
Subjt:  TQADRKRKAP-----AAASTPQPKVKKPKVDAAKQ

TYJ99764.1 protein MNN4-like [Cucumis melo var. makuwa]7.0e-1636.14Show/hide
Query:  FNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKK--MAREALEVIACPGAAWKITPTGKS-----AMLLYCILTKKRVNLGNLIATSI
        FNAEE   E+ GK V F  EAIN LY + N+    G ++V+    K    +EALE +  PG  W  TPTG +      MLLYCI+ +  VN+G +I   +
Subjt:  FNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKK--MAREALEVIACPGAAWKITPTGKS-----AMLLYCILTKKRVNLGNLIATSI

Query:  LAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTL--GDTATEGATQA------DRKRKAPAAASTPQPK
         AW + P G+  FP  +E LC+K    L     V     +C++ +L+R+IT+H  K   R  KT   G+  T  +  A      D K   P A+S    K
Subjt:  LAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTL--GDTATEGATQA------DRKRKAPAAASTPQPK

Query:  VK
         K
Subjt:  VK

TYK05842.1 gag/pol protein [Cucumis melo var. makuwa]9.7e-1842.34Show/hide
Query:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLYCILTKK--RVN
        K+++ VV KFY  KFN  +  + I  +   F+ E IN LY  PND E  GQE V   TK +A+EAL+V+A PG   ++ P  K    LY  LT K   +N
Subjt:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLYCILTKK--RVN

Query:  LGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL
        L  +I  +IL W   PK  + FPS +E LC+K +P L
Subjt:  LGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein9.8e-1641.1Show/hide
Query:  EATEFFEEV--EVDNLNKEVVLNFLNDRVRKRK-EAYMKRTKE----VCRRKDEHFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISG
        E  E  EE+  EV+ +++E++    + R R RK  + MKR +E    +   KD +   A  +AFGW+KFFKG +K+++ VV KFYA+  N  E+   +  
Subjt:  EATEFFEEV--EVDNLNKEVVLNFLNDRVRKRK-EAYMKRTKE----VCRRKDEHFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISG

Query:  KTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLY
        K+  F+ EAIN LY  P D E P    + +  K+ A EALE IA  GA + ITPTGK   LLY
Subjt:  KTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLY

A0A5A7V6M5 Gag/pol protein2.1e-1835.88Show/hide
Query:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP-----------TGKS-----
        K+++ VV KFY  KFN  +  + I  +   F+ E IN LY  PND E  GQE V   TK +A+EAL+V+A PG   ++ P           T K+     
Subjt:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP-----------TGKS-----

Query:  -------------------AMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL
                            ++LYCI+ KK +NL  +I  +IL W   PK A+ FPS +E LC+K +P L
Subjt:  -------------------AMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL

A0A5D3BEA4 Uncharacterized protein4.9e-1534.04Show/hide
Query:  HFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP
        +F+++ I+AFGW KFF G TK  I                                  LY++ ND   P  E +  PTK++ARE L        AW    
Subjt:  HFLYAPIQAFGWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITP

Query:  TGKSAMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTLGDTATEGA
         G  A     I      NLG +I  +ILAW   PKGA SFPS +E L +K +P L  +    I   + NQ +LNR+IT H  KE E   KTLG       
Subjt:  TGKSAMLLYCILTKKRVNLGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTLGDTATEGA

Query:  TQADRKRKAP-----AAASTPQPKVKKPKVDAAKQ
         +       P       AST     KK KVDA KQ
Subjt:  TQADRKRKAP-----AAASTPQPKVKKPKVDAAKQ

A0A5D3BL64 Protein MNN4-like3.4e-1636.14Show/hide
Query:  FNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKK--MAREALEVIACPGAAWKITPTGKS-----AMLLYCILTKKRVNLGNLIATSI
        FNAEE   E+ GK V F  EAIN LY + N+    G ++V+    K    +EALE +  PG  W  TPTG +      MLLYCI+ +  VN+G +I   +
Subjt:  FNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKK--MAREALEVIACPGAAWKITPTGKS-----AMLLYCILTKKRVNLGNLIATSI

Query:  LAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTL--GDTATEGATQA------DRKRKAPAAASTPQPK
         AW + P G+  FP  +E LC+K    L     V     +C++ +L+R+IT+H  K   R  KT   G+  T  +  A      D K   P A+S    K
Subjt:  LAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTL--GDTATEGATQA------DRKRKAPAAASTPQPK

Query:  VK
         K
Subjt:  VK

A0A5D3C3P6 Gag/pol protein4.7e-1842.34Show/hide
Query:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLYCILTKK--RVN
        K+++ VV KFY  KFN  +  + I  +   F+ E IN LY  PND E  GQE V   TK +A+EAL+V+A PG   ++ P  K    LY  LT K   +N
Subjt:  KVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLYCILTKK--RVN

Query:  LGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL
        L  +I  +IL W   PK  + FPS +E LC+K +P L
Subjt:  LGNLIATSILAWTRAPKGAISFPSTVEALCMKVVPFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGATCGTTAAGCACTCATCAAGATCGCATCAAGGTTCGCTCTGATGGTCCTGAATTAGAGCAATCTATATCGCGGAAAAGTGACGAACAAGGAACGCCACAATA
CACCCACCTGAGGCACGGCAAAGGAAAAGTATTGCTAAAACCTCCACCAGAAGCAACCGAATTTTTCGAAGAAGTGGAGGTTGATAATTTGAATAAGGAGGTCGTGCTTA
ACTTCCTCAACGATCGGGTAAGAAAAAGAAAGGAGGCATACATGAAGAGAACAAAAGAAGTTTGTCGCAGGAAGGACGAACATTTCCTCTACGCGCCTATCCAGGCATTT
GGCTGGAAGAAATTTTTCAAGGGGCACACCAAAGTACAAATAGGTGTGGTGGAGAAATTTTACGCAGCTAAATTTAATGCTGAGGAGTTTAGCGTTGAAATTAGTGGAAA
AACGGTGAGTTTCGATGCGGAGGCCATCAACAGTCTATACGAAGTGCCCAACGATGTTGAAATACCTGGACAAGAATATGTGGTAAGCCCAACGAAGAAGATGGCTCGTG
AAGCGTTGGAAGTCATCGCCTGTCCTGGGGCCGCATGGAAGATCACGCCGACGGGAAAGTCAGCGATGCTACTTTATTGCATACTGACAAAGAAGCGCGTCAATCTCGGT
AATCTGATAGCTACATCCATTCTGGCTTGGACGCGAGCTCCCAAGGGTGCCATATCCTTCCCATCTACAGTCGAAGCCCTCTGCATGAAGGTCGTGCCATTTCTAGGCAC
CATAAACACTGTCCCAATTCTAGGCAGTCTGTGCAATCAAATGTCTTTGAATCGCATGATCACCCTCCATGCCTACAAGGAAATGGAAAGGCGATCAAAGACATTGGGTG
ACACAGCAACTGAAGGCGCGACCCAGGCAGATCGCAAGAGAAAAGCCCCAGCCGCTGCATCAACCCCTCAACCAAAAGTAAAAAAACCAAAGGTTGATGCGGCAAAACAA
CCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGATCGTTAAGCACTCATCAAGATCGCATCAAGGTTCGCTCTGATGGTCCTGAATTAGAGCAATCTATATCGCGGAAAAGTGACGAACAAGGAACGCCACAATA
CACCCACCTGAGGCACGGCAAAGGAAAAGTATTGCTAAAACCTCCACCAGAAGCAACCGAATTTTTCGAAGAAGTGGAGGTTGATAATTTGAATAAGGAGGTCGTGCTTA
ACTTCCTCAACGATCGGGTAAGAAAAAGAAAGGAGGCATACATGAAGAGAACAAAAGAAGTTTGTCGCAGGAAGGACGAACATTTCCTCTACGCGCCTATCCAGGCATTT
GGCTGGAAGAAATTTTTCAAGGGGCACACCAAAGTACAAATAGGTGTGGTGGAGAAATTTTACGCAGCTAAATTTAATGCTGAGGAGTTTAGCGTTGAAATTAGTGGAAA
AACGGTGAGTTTCGATGCGGAGGCCATCAACAGTCTATACGAAGTGCCCAACGATGTTGAAATACCTGGACAAGAATATGTGGTAAGCCCAACGAAGAAGATGGCTCGTG
AAGCGTTGGAAGTCATCGCCTGTCCTGGGGCCGCATGGAAGATCACGCCGACGGGAAAGTCAGCGATGCTACTTTATTGCATACTGACAAAGAAGCGCGTCAATCTCGGT
AATCTGATAGCTACATCCATTCTGGCTTGGACGCGAGCTCCCAAGGGTGCCATATCCTTCCCATCTACAGTCGAAGCCCTCTGCATGAAGGTCGTGCCATTTCTAGGCAC
CATAAACACTGTCCCAATTCTAGGCAGTCTGTGCAATCAAATGTCTTTGAATCGCATGATCACCCTCCATGCCTACAAGGAAATGGAAAGGCGATCAAAGACATTGGGTG
ACACAGCAACTGAAGGCGCGACCCAGGCAGATCGCAAGAGAAAAGCCCCAGCCGCTGCATCAACCCCTCAACCAAAAGTAAAAAAACCAAAGGTTGATGCGGCAAAACAA
CCCTAG
Protein sequenceShow/hide protein sequence
MVGSLSTHQDRIKVRSDGPELEQSISRKSDEQGTPQYTHLRHGKGKVLLKPPPEATEFFEEVEVDNLNKEVVLNFLNDRVRKRKEAYMKRTKEVCRRKDEHFLYAPIQAF
GWKKFFKGHTKVQIGVVEKFYAAKFNAEEFSVEISGKTVSFDAEAINSLYEVPNDVEIPGQEYVVSPTKKMAREALEVIACPGAAWKITPTGKSAMLLYCILTKKRVNLG
NLIATSILAWTRAPKGAISFPSTVEALCMKVVPFLGTINTVPILGSLCNQMSLNRMITLHAYKEMERRSKTLGDTATEGATQADRKRKAPAAASTPQPKVKKPKVDAAKQ
P