; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017644 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017644
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCAP-Gly domain-containing linker protein 1
Genome locationchr06:5000039..5002528
RNA-Seq ExpressionPI0017644
SyntenyPI0017644
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134206.1 CAP-Gly domain-containing linker protein 1 [Cucumis sativus]4.6e-6898Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQV+TYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLGLQDVSVDNNETQHQHPVGS DKEDADEAKKD+LTEEKGNEAEN
Subjt:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
XP_008438878.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X1 [Cucumis melo]8.7e-6797.35Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLG-LQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLG LQDVSVD NETQHQHP GSRDKEDADEAKKD LTEEKGNEAEN
Subjt:  TSLRNLG-LQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
XP_008438879.1 PREDICTED: CAP-Gly domain-containing linker protein 1 isoform X2 [Cucumis melo]3.5e-6898Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLGLQDVSVD NETQHQHP GSRDKEDADEAKKD LTEEKGNEAEN
Subjt:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
XP_038878824.1 CAP-Gly domain-containing linker protein 1 isoform X1 [Benincasa hispida]3.1e-6494Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MAD+DSSTPS APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLGLQDVSV++NE QHQHPV S DKEDAD+AKKD LTEEKGNEAEN
Subjt:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
XP_038878834.1 CAP-Gly domain-containing linker protein 1 isoform X2 [Benincasa hispida]8.5e-6292.67Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MAD+DSSTPS APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLG  DVSV++NE QHQHPV S DKEDAD+AKKD LTEEKGNEAEN
Subjt:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
TrEMBL top hitse value%identityAlignment
A0A1S3AXE8 CAP-Gly domain-containing linker protein 1 isoform X14.2e-6797.35Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLG-LQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLG LQDVSVD NETQHQHP GSRDKEDADEAKKD LTEEKGNEAEN
Subjt:  TSLRNLG-LQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
A0A1S3AY29 CAP-Gly domain-containing linker protein 1 isoform X21.7e-6898Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLGLQDVSVD NETQHQHP GSRDKEDADEAKKD LTEEKGNEAEN
Subjt:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
A0A5D3D134 CAP-Gly domain-containing linker protein 1 isoform X21.7e-6898Show/hide
Query:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
        MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT
Subjt:  MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVT

Query:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
        TSLRNLGLQDVSVD NETQHQHP GSRDKEDADEAKKD LTEEKGNEAEN
Subjt:  TSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN
A0A6J1GVY7 CAP-Gly domain-containing linker protein 1-like4.0e-5785.81Show/hide
Query:  MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKD--SLTEEKGNEAEN
        DVTTSLRNLGLQDVSVDNNET+HQHP    +KEDA EA K+    TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKD--SLTEEKGNEAEN
A0A6J1IY17 CAP-Gly domain-containing linker protein 13.0e-5785.81Show/hide
Query:  MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
        MAD+DSS+PS   PAPLSAK ENLTPIGSKI+ELNESR+ELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE
Subjt:  MADSDSSTPS---PAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQE

Query:  DVTTSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSL--TEEKGNEAEN
        DVTTSLRNLGLQDVSVDNNET+HQHP    +KEDA EA K+    TEEKGNEA N
Subjt:  DVTTSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSL--TEEKGNEAEN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15790.1 unknown protein8.2e-3154.3Show/hide
Query:  MADSDSSTPSP-------APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQ
        MAD  S + SP       +P + KK+N  P+ SK+TELNESR+ELLNRIQ+LKQDLQ+WR KLDTQV  YR ELS LKK+LN+EVE LR EF++L+TTL 
Subjt:  MADSDSSTPSP-------APLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQ

Query:  QQQEDVTTSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEK
        QQQ+DV+ SL++LGLQD                  KE  D  K+  +TEEK
Subjt:  QQQEDVTTSLRNLGLQDVSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACTCCGACTCTTCCACTCCTTCCCCTGCTCCTCTATCAGCAAAAAAGGAGAATCTAACCCCCATTGGCTCCAAAATTACGGAATTGAACGAATCAAGGTCAGA
GCTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAGGTCAAAGCTAGACACGCAAGTTAACACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCAC
TTAATGTTGAAGTAGAGCACCTTCGCACGGAATTCCAAGAACTAAGGACTACCCTTCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTCTTCAGGAT
GTTTCTGTGGACAATAACGAGACGCAACATCAACATCCAGTGGGAAGCCGCGACAAGGAAGATGCAGACGAGGCTAAGAAGGATAGCTTAACAGAGGAGAAGGGTAATGA
AGCTGAGAATTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTCCGTACAGTTTCACCCACAAGGAAGAGAGTGAGCAAAGTGGTGAGTGAAGCGTGGCGTTGGGTTTTGTTTTGGTTCAAAATTCAAATCTTCGACAAACTCTGTCC
CCATCTTCTCTTATTTTTCTTCTTTTTTTCTCTTTCCTCAAATCTTTTGAATTTTCATTTCCATTTCGATTTCACCCATCCCCATCTCAACCCTAATTTCCAATTCTTCA
GATTCTGATTTTCCCCATTTCCATTTCCATTTCCATTTCCACCCGTTTCGATCCCTGCTTCTATGGCGGACTCCGACTCTTCCACTCCTTCCCCTGCTCCTCTATCAGCA
AAAAAGGAGAATCTAACCCCCATTGGCTCCAAAATTACGGAATTGAACGAATCAAGGTCAGAGCTGCTTAATAGAATTCAATCTCTTAAGCAGGATCTCCAGAATTGGAG
GTCAAAGCTAGACACGCAAGTTAACACCTACCGCAGTGAACTCTCCGAACTCAAGAAATCACTTAATGTTGAAGTAGAGCACCTTCGCACGGAATTCCAAGAACTAAGGA
CTACCCTTCAGCAGCAACAAGAAGATGTGACTACTAGCCTGAGGAACTTGGGTCTTCAGGATGTTTCTGTGGACAATAACGAGACGCAACATCAACATCCAGTGGGAAGC
CGCGACAAGGAAGATGCAGACGAGGCTAAGAAGGATAGCTTAACAGAGGAGAAGGGTAATGAAGCTGAGAATTAAGTGGCAGTTTTAGCATGATACGTTCTAAGCTTTTC
ATTGCATGGTAAGAGAATCTTAGCAGTTCTCTCTAGGCGATGGATTTCCACATTTTTCTATTTTGCATCATGCTCTTTTTTAATTTCAATCTTTGTAACGATAGGGTTCT
TTTCAATATTTCCCATTGAGGTGTTCTATGATATCTCCACCCTTTGGAGCTGATCTATCTCTCTGGCTATGTCTCTTTCTCTAAATAACTATGGAGTTTATGTTGGAAAA
ATTTTCAGTACTTAATAGCATTGATTCATTGAAGAA
Protein sequenceShow/hide protein sequence
MADSDSSTPSPAPLSAKKENLTPIGSKITELNESRSELLNRIQSLKQDLQNWRSKLDTQVNTYRSELSELKKSLNVEVEHLRTEFQELRTTLQQQQEDVTTSLRNLGLQD
VSVDNNETQHQHPVGSRDKEDADEAKKDSLTEEKGNEAEN