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PI0017651 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017651
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:15076282..15076847
RNA-Seq ExpressionPI0017651
SyntenyPI0017651
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036882.1 uncharacterized protein E6C27_scaffold2534G00010 [Cucumis melo var. makuwa]1.1e-0941.35Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y + K+DEFL LKQG  +                       +RCR FE GLR EIRTPVT +    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEK
         EEK
Subjt:  IEEK

KAA0037515.1 uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa]3.0e-1038.98Show/hide
Query:  NKCDEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALC
        N    + W+ F+ IF EKY+   Y + K+DEFL LKQG  +                       +RC  FE GLR EIRTPVT +    N+S+L+E AL 
Subjt:  NKCDEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALC

Query:  VEKSLIEEKEMKTSMRSV
        VE+S++EEK      R V
Subjt:  VEKSLIEEKEMKTSMRSV

KAA0042167.1 uncharacterized protein E6C27_scaffold67G006610 [Cucumis melo var. makuwa]7.8e-1145.19Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y   K+DEFL LKQG         ++TK             ERCR FE GLR EIRTPVTT+    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEK
         EEK
Subjt:  IEEK

KAA0042295.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.9e-1039.72Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y + K+DEFL LKQG         ++TK             +RCR FE GLR EIRTPVTT+    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEKEMKTSMRSVEKERKSEDRQEDTKRAKANVSQGSRWSR
         EEK      R          RQ     A  NVS GS + R
Subjt:  IEEKEMKTSMRSVEKERKSEDRQEDTKRAKANVSQGSRWSR

XP_038896366.1 uncharacterized protein LOC120084630 [Benincasa hispida]1.0e-1037.06Show/hide
Query:  DEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEK
        +EI WEEF++ F E+++ ++++D KQDEFL L QG  T                      KERCR FETGLR EIRTPVT       +S+L+E  + VE+
Subjt:  DEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEK

Query:  SLIEEKEMKTSMRSVEKERKSEDRQEDTKRAKANVSQGSRWSR
        SL+ E+     +R       S  R+E  +     V   S W R
Subjt:  SLIEEKEMKTSMRSVEKERKSEDRQEDTKRAKANVSQGSRWSR

TrEMBL top hitse value%identityAlignment
A0A5A7SX02 CCHC-type domain-containing protein5.5e-1041.35Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y + K+DEFL LKQG  +                       +RCR FE GLR EIRTPVT +    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEK
         EEK
Subjt:  IEEK

A0A5A7T0C1 Retrotrans_gag domain-containing protein5.5e-1041.35Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y + K+DEFL LKQG  +                       +RCR FE GLR EIRTPVT +    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEK
         EEK
Subjt:  IEEK

A0A5A7TK96 CCHC-type domain-containing protein3.8e-1145.19Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y   K+DEFL LKQG         ++TK             ERCR FE GLR EIRTPVTT+    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEK
         EEK
Subjt:  IEEK

A0A5A7TLH7 Reverse transcriptase1.9e-1039.72Show/hide
Query:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL
        + W+ F+ IF +KY+   Y + K+DEFL LKQG         ++TK             +RCR FE GLR EIRTPVTT+    N+S+L+E AL VE+S+
Subjt:  IGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQG---------EFTK-------------ERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSL

Query:  IEEKEMKTSMRSVEKERKSEDRQEDTKRAKANVSQGSRWSR
         EEK      R          RQ     A  NVS GS + R
Subjt:  IEEKEMKTSMRSVEKERKSEDRQEDTKRAKANVSQGSRWSR

A0A5D3BSA6 Retrotrans_gag domain-containing protein1.4e-1038.98Show/hide
Query:  NKCDEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALC
        N    + W+ F+ IF EKY+   Y + K+DEFL LKQG  +                       +RC  FE GLR EIRTPVT +    N+S+L+E AL 
Subjt:  NKCDEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFT----------------------KERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALC

Query:  VEKSLIEEKEMKTSMRSV
        VE+S++EEK      R V
Subjt:  VEKSLIEEKEMKTSMRSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAGGAGAATAAATGCGATGAGATTGGTTGGGAAGAGTTTAAGGAAATCTTTCATGAGAAGTATTTCTCACAGGCTTATAAGGATGAGAAACAAGATGAATTTTT
ACACCTGAAGCAAGGAGAATTCACGAAGGAAAGGTGTAGACATTTTGAGACAGGATTAAGAAGCGAGATAAGGACACCAGTTACAACACTTGTCACACGATGTAATTACT
CTAAATTACTTGAAGCAGCATTATGTGTAGAGAAGAGTTTGATAGAAGAAAAAGAAATGAAGACATCCATGCGTAGTGTTGAAAAGGAAAGGAAGAGTGAGGATAGGCAA
GAGGACACCAAGCGAGCTAAGGCAAATGTTAGCCAAGGATCGCGTTGGAGTAGGGACCAAAATCTTTTTGTGGGGAATGTGGTCGGAAGCATGCATGAATGTGTAGGTGA
AACACCACAGTGTGTTTCAAATGTGGGAATGAGGGACCTAACCAGAGAGAGTTCGAAAAGAAAACTAAATCGAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAGGAGAATAAATGCGATGAGATTGGTTGGGAAGAGTTTAAGGAAATCTTTCATGAGAAGTATTTCTCACAGGCTTATAAGGATGAGAAACAAGATGAATTTTT
ACACCTGAAGCAAGGAGAATTCACGAAGGAAAGGTGTAGACATTTTGAGACAGGATTAAGAAGCGAGATAAGGACACCAGTTACAACACTTGTCACACGATGTAATTACT
CTAAATTACTTGAAGCAGCATTATGTGTAGAGAAGAGTTTGATAGAAGAAAAAGAAATGAAGACATCCATGCGTAGTGTTGAAAAGGAAAGGAAGAGTGAGGATAGGCAA
GAGGACACCAAGCGAGCTAAGGCAAATGTTAGCCAAGGATCGCGTTGGAGTAGGGACCAAAATCTTTTTGTGGGGAATGTGGTCGGAAGCATGCATGAATGTGTAGGTGA
AACACCACAGTGTGTTTCAAATGTGGGAATGAGGGACCTAACCAGAGAGAGTTCGAAAAGAAAACTAAATCGAATATAA
Protein sequenceShow/hide protein sequence
MLEENKCDEIGWEEFKEIFHEKYFSQAYKDEKQDEFLHLKQGEFTKERCRHFETGLRSEIRTPVTTLVTRCNYSKLLEAALCVEKSLIEEKEMKTSMRSVEKERKSEDRQ
EDTKRAKANVSQGSRWSRDQNLFVGNVVGSMHECVGETPQCVSNVGMRDLTRESSKRKLNRI