; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017668 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017668
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:10631409..10638669
RNA-Seq ExpressionPI0017668
SyntenyPI0017668
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34114.1 retrotransposon protein [Cucumis melo subsp. melo]7.9e-10738.71Show/hide
Query:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF
        MD + +AS++N F+ SQRQLLL L+LL ND KRI H+PY+TRH IRQLAYFRM++                         T AGL STE++DVEEMVAMF
Subjt:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF

Query:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------
        LH+LAHDVK RVI+ EF+R GE +SRHFN+VLLAV+R     + K   V N CTD                                             
Subjt:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------

Query:  ----------ADGGGSS-----------------------------------------------------------------------------------
                  A   GS+                                                                                   
Subjt:  ----------ADGGGSS-----------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------MTTSSRAPKHHWTKEEDVTLV
                                                                                       MT+SSR PKH WTKEE+  LV
Subjt:  -------------------------------------------------------------------------------MTTSSRAPKHHWTKEEDVTLV

Query:  ECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLL
        ECLVEL                      +M+A ++PG NI AS ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAAKGLL
Subjt:  ECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLL

Query:  NKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIR
        NKSF HYD+L YVFG+D ATGGRAE+FAD+GSN P GYD   A    D +FP MYS  L+MSPD +M TR  R+SE R  SSGSK+KR G A ++ +I+R
Subjt:  NKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIR

Query:  TAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN
        TAIEY N+QL  IA+WP  QRQDA+ TR E+V+ L+ IP+L+   R   MRI+M NVDDMKAFL++ + +K  YC++ILQ+N
Subjt:  TAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-12643.88Show/hide
Query:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF
        MD + +AS++N F+ SQRQLLL L+LL ND KRI H+PY+TRH IRQLAYFRM++ +DL+C QSTRMDRRCFAILCHLL+T AGL STE++DVEEMVAMF
Subjt:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF

Query:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------
        LH+LAHDVK+RVIQ EF+R GE +SRHFN+VLLAV+R     + K   V N CTD                                             
Subjt:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------

Query:  -------------------------------------------------ADG------------------------------------------------
                                                         A+G                                                
Subjt:  -------------------------------------------------ADG------------------------------------------------

Query:  -------GGS-----------------------------------SMTTSSRAPKHHWTKEEDVTLVECLVE------------------LKMIAERMPG
               G S                                   SMT+SSR PKH WTKEE+  LVE +                     +M+A ++PG
Subjt:  -------GGS-----------------------------------SMTTSSRAPKHHWTKEEDVTLVECLVE------------------LKMIAERMPG

Query:  HNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAG
         NI AS ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAAKGLLNKSF HYD+L YVFG+D ATGGRAE+FAD+GSN P G
Subjt:  HNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAG

Query:  YDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQG
        YD F A    D +F  MYS  L+MSPD +M TR  R+SE R  SSGSK+KR G A ++ +I+RTAIEY N+QL  IA+WP  QRQDA+ TR E+V+QL+ 
Subjt:  YDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQG

Query:  IPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN
        IP+L+   R   MRI+M NVDDMKAFL++ + +K  YC++ILQ+N
Subjt:  IPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN

KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-8958.09Show/hide
Query:  MTTSSRAPKHHWTKEEDVTLVECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI
        MT+SSR PKH WTKEE+  LVECLVEL                      +M+A ++PG NI AS ID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  MTTSSRAPKHHWTKEEDVTLVECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI

Query:  IAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRA
        +AEK+++D+W  SHPAAKGLLNKSF HYD+L YVFG+D ATGGRAE+FAD+GSN P GYD   A    D +FP MYS  L+MSPD +M TR  R+SE R 
Subjt:  IAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRA

Query:  GSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVIL
         SSGSK+KR G A ++ +I+RTAIEY N+QL  IA+WP  QRQDA+ TR E+V+ L+ IP+L+   R   MRI+M NVDDMKAFL++ + +K  YC++IL
Subjt:  GSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVIL

Query:  QDN
        Q+N
Subjt:  QDN

KAA0045638.1 retrotransposon protein [Cucumis melo var. makuwa]7.5e-9744.51Show/hide
Query:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH
        MN+NKR+PH P DTRH IR+LAYFRM++E+DL+C QSTRMDRR FAILCHLL    GL STEI+DVEEMVAMFLHVLAHDVK+ VIQ EF   G +   +
Subjt:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH

Query:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE
          + + A  R       G+  T   G  D  G       G       SR  ++++                                         TK  
Subjt:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE

Query:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL
            ++EC               L +L +M+AE++PG  + A ++IDCRIKT+KR FQAI+EM+GP CSG GWNDE KCII +K+L+DNWV+SHPAAKGL
Subjt:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL

Query:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI
        LNKSF +YD+L YVFGR+      AETFADVGSN P  GYD F   DGN+ +F  +YSQ +D+S D +  +RP+R SEGR GSSGSK+KR  Q     E 
Subjt:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI

Query:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD
        I  A++ TN+QL+ IA+WP     + +  R E  + L+ +P+L+   R    R ++  +DD++ F+ + E+ +  +C V+L+D
Subjt:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD

TYK02619.1 retrotransposon protein [Cucumis melo var. makuwa]5.7e-9744.51Show/hide
Query:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH
        MN+NKR+PH P DTRH IR+LAYF M++E+DL+C QSTRMDRR FAILCHLL+  AGL STEI+DVEEMVAMFLHVLAHDVK+ VIQ EF   G +   +
Subjt:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH

Query:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE
          + + A  R       G+  T   G  D  G       G       SR  ++++                                         TK  
Subjt:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE

Query:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL
            ++EC               L +L +M+AE++PG  + A ++IDCRIKT+KR FQAI+EM+GP CSG GWNDE KCII +K+L+DNWV+SHPAAKGL
Subjt:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL

Query:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI
        LNKSF +YD+L YVFGR+      AETFADVGSN P  GYD F   DGN+ +F  +YSQ +D+S D +  +RP+R SEGR GSSGSK+KR  Q     E 
Subjt:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI

Query:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD
        I  A++ TN+QL+ IA+WP     + +  R E  + L+ +P+L+   R    R ++  +DD++ F+ + E+ +  +C V+L+D
Subjt:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD

TrEMBL top hitse value%identityAlignment
A0A5A7SWD8 Retrotransposon protein9.7e-12743.88Show/hide
Query:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF
        MD + +AS++N F+ SQRQLLL L+LL ND KRI H+PY+TRH IRQLAYFRM++ +DL+C QSTRMDRRCFAILCHLL+T AGL STE++DVEEMVAMF
Subjt:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF

Query:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------
        LH+LAHDVK+RVIQ EF+R GE +SRHFN+VLLAV+R     + K   V N CTD                                             
Subjt:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------

Query:  -------------------------------------------------ADG------------------------------------------------
                                                         A+G                                                
Subjt:  -------------------------------------------------ADG------------------------------------------------

Query:  -------GGS-----------------------------------SMTTSSRAPKHHWTKEEDVTLVECLVE------------------LKMIAERMPG
               G S                                   SMT+SSR PKH WTKEE+  LVE +                     +M+A ++PG
Subjt:  -------GGS-----------------------------------SMTTSSRAPKHHWTKEEDVTLVECLVE------------------LKMIAERMPG

Query:  HNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAG
         NI AS ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAAKGLLNKSF HYD+L YVFG+D ATGGRAE+FAD+GSN P G
Subjt:  HNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAG

Query:  YDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQG
        YD F A    D +F  MYS  L+MSPD +M TR  R+SE R  SSGSK+KR G A ++ +I+RTAIEY N+QL  IA+WP  QRQDA+ TR E+V+QL+ 
Subjt:  YDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQG

Query:  IPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN
        IP+L+   R   MRI+M NVDDMKAFL++ + +K  YC++ILQ+N
Subjt:  IPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN

A0A5A7TS15 Retrotransposon protein3.6e-9744.51Show/hide
Query:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH
        MN+NKR+PH P DTRH IR+LAYFRM++E+DL+C QSTRMDRR FAILCHLL    GL STEI+DVEEMVAMFLHVLAHDVK+ VIQ EF   G +   +
Subjt:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH

Query:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE
          + + A  R       G+  T   G  D  G       G       SR  ++++                                         TK  
Subjt:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE

Query:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL
            ++EC               L +L +M+AE++PG  + A ++IDCRIKT+KR FQAI+EM+GP CSG GWNDE KCII +K+L+DNWV+SHPAAKGL
Subjt:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL

Query:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI
        LNKSF +YD+L YVFGR+      AETFADVGSN P  GYD F   DGN+ +F  +YSQ +D+S D +  +RP+R SEGR GSSGSK+KR  Q     E 
Subjt:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI

Query:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD
        I  A++ TN+QL+ IA+WP     + +  R E  + L+ +P+L+   R    R ++  +DD++ F+ + E+ +  +C V+L+D
Subjt:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD

A0A5D3BWV2 Retrotransposon protein2.8e-9744.51Show/hide
Query:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH
        MN+NKR+PH P DTRH IR+LAYF M++E+DL+C QSTRMDRR FAILCHLL+  AGL STEI+DVEEMVAMFLHVLAHDVK+ VIQ EF   G +   +
Subjt:  MNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRH

Query:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE
          + + A  R       G+  T   G  D  G       G       SR  ++++                                         TK  
Subjt:  FNLVLLAVLRAI-----GKTITVANGCTDADG-------GGSSMTTSSRAPKHHW-----------------------------------------TKEE

Query:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL
            ++EC               L +L +M+AE++PG  + A ++IDCRIKT+KR FQAI+EM+GP CSG GWNDE KCII +K+L+DNWV+SHPAAKGL
Subjt:  DV-TLVEC---------------LVEL-KMIAERMPGHNIMA-SIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGL

Query:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI
        LNKSF +YD+L YVFGR+      AETFADVGSN P  GYD F   DGN+ +F  +YSQ +D+S D +  +RP+R SEGR GSSGSK+KR  Q     E 
Subjt:  LNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVP-AGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEI

Query:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD
        I  A++ TN+QL+ IA+WP     + +  R E  + L+ +P+L+   R    R ++  +DD++ F+ + E+ +  +C V+L+D
Subjt:  IRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQD

A0A5D3DPR5 Retrotransposon protein3.6e-8958.09Show/hide
Query:  MTTSSRAPKHHWTKEEDVTLVECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI
        MT+SSR PKH WTKEE+  LVECLVEL                      +M+A ++PG NI AS ID RIK MKR F A++EMRGP CSGFGWNDE KCI
Subjt:  MTTSSRAPKHHWTKEEDVTLVECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCI

Query:  IAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRA
        +AEK+++D+W  SHPAAKGLLNKSF HYD+L YVFG+D ATGGRAE+FAD+GSN P GYD   A    D +FP MYS  L+MSPD +M TR  R+SE R 
Subjt:  IAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRA

Query:  GSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVIL
         SSGSK+KR G A ++ +I+RTAIEY N+QL  IA+WP  QRQDA+ TR E+V+ L+ IP+L+   R   MRI+M NVDDMKAFL++ + +K  YC++IL
Subjt:  GSSGSKKKRRGQAFEATEIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVIL

Query:  QDN
        Q+N
Subjt:  QDN

E5GCB5 Retrotransposon protein3.8e-10738.71Show/hide
Query:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF
        MD + +AS++N F+ SQRQLLL L+LL ND KRI H+PY+TRH IRQLAYFRM++                         T AGL STE++DVEEMVAMF
Subjt:  MDSNNIASLLNVFMTSQRQLLLTLDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMF

Query:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------
        LH+LAHDVK RVI+ EF+R GE +SRHFN+VLLAV+R     + K   V N CTD                                             
Subjt:  LHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLR----AIGKTITVANGCTD---------------------------------------------

Query:  ----------ADGGGSS-----------------------------------------------------------------------------------
                  A   GS+                                                                                   
Subjt:  ----------ADGGGSS-----------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------MTTSSRAPKHHWTKEEDVTLV
                                                                                       MT+SSR PKH WTKEE+  LV
Subjt:  -------------------------------------------------------------------------------MTTSSRAPKHHWTKEEDVTLV

Query:  ECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLL
        ECLVEL                      +M+A ++PG NI AS ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK+++D+W  SHPAAKGLL
Subjt:  ECLVEL----------------------KMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLL

Query:  NKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIR
        NKSF HYD+L YVFG+D ATGGRAE+FAD+GSN P GYD   A    D +FP MYS  L+MSPD +M TR  R+SE R  SSGSK+KR G A ++ +I+R
Subjt:  NKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEATEIIR

Query:  TAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN
        TAIEY N+QL  IA+WP  QRQDA+ TR E+V+ L+ IP+L+   R   MRI+M NVDDMKAFL++ + +K  YC++ILQ+N
Subjt:  TAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLS---RVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.3e-0927.14Show/hide
Query:  RAPKHHWTKEEDVTLVECL---------------VELKMI--AERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNW
        + P + WT +E   L+E +               VE K++    +  G N        R+K +K  +Q+  +++    SGFGW+ E K   A  +++ ++
Subjt:  RAPKHHWTKEEDVTLVECL---------------VELKMI--AERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNW

Query:  VKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFAD
        +K+HP  K +  +S  H++DL  +FG   ATG  A   +D
Subjt:  VKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFAD

AT1G43722.1 unknown protein5.3e-0840.48Show/hide
Query:  FRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLA
        +R + ++   C Q  RM   CF  LC++LQT   LQ T  I +EE VAMFL +  H+  +R +   F R  E V R F  VL A
Subjt:  FRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLA

AT2G24960.2 unknown protein1.1e-0822.64Show/hide
Query:  GCTDADGGGSSMTTSSRAPKHH--------WTKEEDVTLVECLVELKMIAERMPGHNIMAS--------------------IIDCRIKTMKRAFQAISEM
        G    D G ++ T+ ++A +          WT   D  L++ LVE      R+ G   + S                    ++  R K ++R +  I  +
Subjt:  GCTDADGGGSSMTTSSRAPKHH--------WTKEEDVTLVECLVELKMIAERMPGHNIMAS--------------------IIDCRIKTMKRAFQAISEM

Query:  RGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATG
             +GF W+     +IA+ D+++ ++++HP A+    K+ P Y +LC++FG++ + G
Subjt:  RGPMCSGFGWNDELKCIIAEKDLYDNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATG

AT4G02210.1 unknown protein9.0e-0824.59Show/hide
Query:  WTKEEDVTLVECLVELKMIAERMPGHNIM--------------------ASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKS
        WT E D   +E +VE      R   H                         ++  R KT++  F++++ +   +  GF W+D  + ++A+  ++D ++K 
Subjt:  WTKEEDVTLVECLVELKMIAERMPGHNIM--------------------ASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLYDNWVKS

Query:  HPAAKGLLNKSFPHYDDLCYVF
        HP ++    KS P Y DLC V+
Subjt:  HPAAKGLLNKSFPHYDDLCYVF

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.9e-1041.76Show/hide
Query:  CHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLRAIGKTITVANGCTD
        C ++ RMD+  F  LC LLQT   L+ T  I +E  +A+FL ++ H+++ R +Q  F   GE +SRHFN VL AV+ AI K     N  +D
Subjt:  CHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLLAVLRAIGKTITVANGCTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGTCCTTTGCATGGCTTTTCTGTAACGTGAGCCCATCCGACGAACCCTTGCCGCTCCGACAACCTCTTCGCGAACTTGTGTTTGGATCGAAACGGGCCTTCAA
TGGACAGATGCTACACATGATCTCAAAGCGAAGGGGTGGAACAGGGCACGACAAGGTGGCCGGTTCTTTAAACGGTTTGTTTAAATCCGAAGCCGATGAATTTGCACGTG
AAAAATCATCGTCCGGTGAGGGTGTCAATAGTGAGCTTCCAATGGACTCGAACAACATTGCGTCTTTACTTAACGTGTTCATGACATCCCAACGTCAGTTGCTACTGACG
TTGGACTTGTTAATGAACGACAACAAGAGGATACCACATGTACCTTACGACACGAGGCATACGATTAGACAGTTGGCCTATTTTCGCATGGTCTATGAAAATGACCTCAT
CTGTCACCAAAGTACGCGAATGGACAGACGATGTTTCGCCATTTTATGTCATCTACTGCAGACTACCGCTGGATTACAGTCTACCGAAATTATCGATGTCGAAGAAATGG
TAGCCATGTTCCTTCACGTACTTGCGCATGACGTGAAACATCGTGTCATTCAACATGAGTTCCTACGGTTTGGTGAGATGGTTTCACGACATTTCAACCTGGTACTGCTG
GCTGTTTTACGAGCTATTGGCAAAACCATAACGGTGGCGAACGGGTGCACAGATGCCGATGGAGGTGGTTCAAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTG
GACGAAAGAGGAGGATGTCACCCTCGTTGAATGTCTTGTGGAATTGAAAATGATAGCCGAGAGGATGCCGGGACATAACATAATGGCTTCGATCATAGATTGTCGAATAA
AGACTATGAAAAGAGCATTCCAAGCCATATCTGAAATGAGGGGCCCGATGTGCAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATTATTGCCGAGAAAGACTTGTAC
GACAATTGGGTGAAGAGCCATCCAGCCGCGAAGGGCCTCCTAAACAAATCCTTTCCCCATTACGACGACCTCTGCTACGTCTTTGGAAGAGATCCTGCAACAGGAGGTCG
CGCTGAAACCTTTGCCGATGTTGGGTCGAACGTACCTGCAGGGTACGATGGATTTCCCGCTTATGACGGGAATGATATGGAGTTCCCCACGATGTACAGTCAGAGACTGG
ACATGTCACCTGACGGCATAATGGGCACACGACCCAATCGGTTGTCTGAGGGTAGGGCGGGTTCGAGCGGTTCAAAGAAGAAACGGAGAGGGCAGGCATTCGAGGCGACA
GAAATTATTCGTACTGCCATAGAATATACGAACGACCAGCTGAAGGCCATTGCAAAATGGCCCAAAGAACAACGCCAAGATGCAAGCGTGACACGTGCAGAAGTAGTTAA
ACAACTACAGGGAATCCCGAAGCTGAGTAGAGTTTGTTGTATGCGTATAATGATGCACAATGTGGATGACATGAAAGCATTTCTAGACATCGTAGAGGAGCTTAAATTGG
ATTACTGCACGGTCATTCTCCAAGATAACGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGTCCTTTGCATGGCTTTTCTGTAACGTGAGCCCATCCGACGAACCCTTGCCGCTCCGACAACCTCTTCGCGAACTTGTGTTTGGATCGAAACGGGCCTTCAA
TGGACAGATGCTACACATGATCTCAAAGCGAAGGGGTGGAACAGGGCACGACAAGGTGGCCGGTTCTTTAAACGGTTTGTTTAAATCCGAAGCCGATGAATTTGCACGTG
AAAAATCATCGTCCGGTGAGGGTGTCAATAGTGAGCTTCCAATGGACTCGAACAACATTGCGTCTTTACTTAACGTGTTCATGACATCCCAACGTCAGTTGCTACTGACG
TTGGACTTGTTAATGAACGACAACAAGAGGATACCACATGTACCTTACGACACGAGGCATACGATTAGACAGTTGGCCTATTTTCGCATGGTCTATGAAAATGACCTCAT
CTGTCACCAAAGTACGCGAATGGACAGACGATGTTTCGCCATTTTATGTCATCTACTGCAGACTACCGCTGGATTACAGTCTACCGAAATTATCGATGTCGAAGAAATGG
TAGCCATGTTCCTTCACGTACTTGCGCATGACGTGAAACATCGTGTCATTCAACATGAGTTCCTACGGTTTGGTGAGATGGTTTCACGACATTTCAACCTGGTACTGCTG
GCTGTTTTACGAGCTATTGGCAAAACCATAACGGTGGCGAACGGGTGCACAGATGCCGATGGAGGTGGTTCAAGTATGACAACTTCTTCAAGGGCCCCAAAGCACCACTG
GACGAAAGAGGAGGATGTCACCCTCGTTGAATGTCTTGTGGAATTGAAAATGATAGCCGAGAGGATGCCGGGACATAACATAATGGCTTCGATCATAGATTGTCGAATAA
AGACTATGAAAAGAGCATTCCAAGCCATATCTGAAATGAGGGGCCCGATGTGCAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATTATTGCCGAGAAAGACTTGTAC
GACAATTGGGTGAAGAGCCATCCAGCCGCGAAGGGCCTCCTAAACAAATCCTTTCCCCATTACGACGACCTCTGCTACGTCTTTGGAAGAGATCCTGCAACAGGAGGTCG
CGCTGAAACCTTTGCCGATGTTGGGTCGAACGTACCTGCAGGGTACGATGGATTTCCCGCTTATGACGGGAATGATATGGAGTTCCCCACGATGTACAGTCAGAGACTGG
ACATGTCACCTGACGGCATAATGGGCACACGACCCAATCGGTTGTCTGAGGGTAGGGCGGGTTCGAGCGGTTCAAAGAAGAAACGGAGAGGGCAGGCATTCGAGGCGACA
GAAATTATTCGTACTGCCATAGAATATACGAACGACCAGCTGAAGGCCATTGCAAAATGGCCCAAAGAACAACGCCAAGATGCAAGCGTGACACGTGCAGAAGTAGTTAA
ACAACTACAGGGAATCCCGAAGCTGAGTAGAGTTTGTTGTATGCGTATAATGATGCACAATGTGGATGACATGAAAGCATTTCTAGACATCGTAGAGGAGCTTAAATTGG
ATTACTGCACGGTCATTCTCCAAGATAACGGTTGA
Protein sequenceShow/hide protein sequence
MMMSFAWLFCNVSPSDEPLPLRQPLRELVFGSKRAFNGQMLHMISKRRGGTGHDKVAGSLNGLFKSEADEFAREKSSSGEGVNSELPMDSNNIASLLNVFMTSQRQLLLT
LDLLMNDNKRIPHVPYDTRHTIRQLAYFRMVYENDLICHQSTRMDRRCFAILCHLLQTTAGLQSTEIIDVEEMVAMFLHVLAHDVKHRVIQHEFLRFGEMVSRHFNLVLL
AVLRAIGKTITVANGCTDADGGGSSMTTSSRAPKHHWTKEEDVTLVECLVELKMIAERMPGHNIMASIIDCRIKTMKRAFQAISEMRGPMCSGFGWNDELKCIIAEKDLY
DNWVKSHPAAKGLLNKSFPHYDDLCYVFGRDPATGGRAETFADVGSNVPAGYDGFPAYDGNDMEFPTMYSQRLDMSPDGIMGTRPNRLSEGRAGSSGSKKKRRGQAFEAT
EIIRTAIEYTNDQLKAIAKWPKEQRQDASVTRAEVVKQLQGIPKLSRVCCMRIMMHNVDDMKAFLDIVEELKLDYCTVILQDNG