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PI0017675 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017675
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr02:11128721..11130054
RNA-Seq ExpressionPI0017675
SyntenyPI0017675
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043142.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]1.9e-3137.36Show/hide
Query:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------
        +R E LG  + +GSLSV EYE KY ELSRYA +I+  ESDRC+RFERG+R +I TPVT IAKW NFSQ+VE AL+V+                       
Subjt:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------

Query:  GRDNAK-------------------------------------------------------------------------------------SAYQRQAED
        GR+  +                                                                                     +  Q++AED
Subjt:  GRDNAK-------------------------------------------------------------------------------------SAYQRQAED

Query:  EPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
         P VIT T L+CN PA VL DP ATH FVSS+++TKLNR LEPL E L IY+P+ D LLV+EVLR
Subjt:  EPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

KAA0044257.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]7.3e-3137.4Show/hide
Query:  KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK-----
        +GSLSV EYE KY ELSRYA +IV  ES+RC+RFERG+R +I TPVT IAKW NFSQ+VE AL+V+                       GR+  +     
Subjt:  KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK-----

Query:  --------------------------------------------------------------------------------SAYQRQAEDEPIVITNTFLV
                                                                                        +  Q++AED P VIT T L+
Subjt:  --------------------------------------------------------------------------------SAYQRQAEDEPIVITNTFLV

Query:  CNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
        CN PA VL DP ATH FVSS+++TKLNR LEPL E   IY+P+GD LLV+EVLR
Subjt:  CNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

KAA0047501.1 hypothetical protein E6C27_scaffold498G001280 [Cucumis melo var. makuwa]7.6e-3643.67Show/hide
Query:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------
        +R E LG  + +GSLSV EYE KY ELSRYA +IV  ESDRC+RFERG+  +I TPVT IAKW NFSQ+VE AL+V+                       
Subjt:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------

Query:  GRDNAK-------------------------------------------------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITK
        GR++ +                                                 +  Q++AED P VIT T L+CN PA VL DP ATH FVSS+++TK
Subjt:  GRDNAK-------------------------------------------------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITK

Query:  LNRTLEPLPEELIIYSPIGDALLVSEVLR
        LNR LEPL E L IY+P+GD LLV+EVLR
Subjt:  LNRTLEPLPEELIIYSPIGDALLVSEVLR

KAA0067839.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]2.7e-3337.54Show/hide
Query:  PCDLEKKFGIERL----------EVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD---
        P DLEK + IERL          E LG  + +GSLSV EYE KY ELSRYA +IV  ESDRC+RFERG+R +I TPVTTIA W NFSQ++E AL+V+   
Subjt:  PCDLEKKFGIERL----------EVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD---

Query:  --------------------GRDNAK--------------------------------------------------------------------------
                            GR+  +                                                                          
Subjt:  --------------------GRDNAK--------------------------------------------------------------------------

Query:  -----------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
                   +  Q++AED P VIT T L+CN PA VL D  ATH FVSS+++TKLNR LEPL E L IY+P+GD LLV+EVLR
Subjt:  -----------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.1e-3033.73Show/hide
Query:  PCDLEKKFGIERLEVLGAIVF-------------------------------------KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKI
        P + EK  GIERL+ LGA VF                                     +GSL V EYE KY ELSRYA++IV  ESDRC+RFERG+R ++
Subjt:  PCDLEKKFGIERLEVLGAIVF-------------------------------------KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKI

Query:  CTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK----------------------------SAYQRQ-------------
         TPVT IAKW NFSQ+VE AL+V+                       GR+  +                            +AYQRQ             
Subjt:  CTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK----------------------------SAYQRQ-------------

Query:  -------------------------------------------------------------------AEDEPIVITNTFLVCNTPAHVLLDPSATHFFVS
                                                                           AED   VIT T L+CN PA VLLD  ATH FVS
Subjt:  -------------------------------------------------------------------AEDEPIVITNTFLVCNTPAHVLLDPSATHFFVS

Query:  SMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
        SM++TKLNR LEPL EEL+I +P+GD LLVSEVLR
Subjt:  SMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

TrEMBL top hitse value%identityAlignment
A0A5A7TIK0 Gag protease polyprotein-like protein9.4e-3237.36Show/hide
Query:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------
        +R E LG  + +GSLSV EYE KY ELSRYA +I+  ESDRC+RFERG+R +I TPVT IAKW NFSQ+VE AL+V+                       
Subjt:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------

Query:  GRDNAK-------------------------------------------------------------------------------------SAYQRQAED
        GR+  +                                                                                     +  Q++AED
Subjt:  GRDNAK-------------------------------------------------------------------------------------SAYQRQAED

Query:  EPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
         P VIT T L+CN PA VL DP ATH FVSS+++TKLNR LEPL E L IY+P+ D LLV+EVLR
Subjt:  EPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

A0A5A7TQW1 Gag protease polyprotein-like protein3.6e-3137.4Show/hide
Query:  KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK-----
        +GSLSV EYE KY ELSRYA +IV  ES+RC+RFERG+R +I TPVT IAKW NFSQ+VE AL+V+                       GR+  +     
Subjt:  KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK-----

Query:  --------------------------------------------------------------------------------SAYQRQAEDEPIVITNTFLV
                                                                                        +  Q++AED P VIT T L+
Subjt:  --------------------------------------------------------------------------------SAYQRQAEDEPIVITNTFLV

Query:  CNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
        CN PA VL DP ATH FVSS+++TKLNR LEPL E   IY+P+GD LLV+EVLR
Subjt:  CNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

A0A5A7U1N9 Integrase catalytic domain-containing protein3.7e-3643.67Show/hide
Query:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------
        +R E LG  + +GSLSV EYE KY ELSRYA +IV  ESDRC+RFERG+  +I TPVT IAKW NFSQ+VE AL+V+                       
Subjt:  ERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD-----------------------

Query:  GRDNAK-------------------------------------------------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITK
        GR++ +                                                 +  Q++AED P VIT T L+CN PA VL DP ATH FVSS+++TK
Subjt:  GRDNAK-------------------------------------------------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITK

Query:  LNRTLEPLPEELIIYSPIGDALLVSEVLR
        LNR LEPL E L IY+P+GD LLV+EVLR
Subjt:  LNRTLEPLPEELIIYSPIGDALLVSEVLR

A0A5A7UJV1 DNA/RNA polymerases superfamily protein1.0e-3033.73Show/hide
Query:  PCDLEKKFGIERLEVLGAIVF-------------------------------------KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKI
        P + EK  GIERL+ LGA VF                                     +GSL V EYE KY ELSRYA++IV  ESDRC+RFERG+R ++
Subjt:  PCDLEKKFGIERLEVLGAIVF-------------------------------------KGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKI

Query:  CTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK----------------------------SAYQRQ-------------
         TPVT IAKW NFSQ+VE AL+V+                       GR+  +                            +AYQRQ             
Subjt:  CTPVTTIAKWANFSQVVEPALQVD-----------------------GRDNAK----------------------------SAYQRQ-------------

Query:  -------------------------------------------------------------------AEDEPIVITNTFLVCNTPAHVLLDPSATHFFVS
                                                                           AED   VIT T L+CN PA VLLD  ATH FVS
Subjt:  -------------------------------------------------------------------AEDEPIVITNTFLVCNTPAHVLLDPSATHFFVS

Query:  SMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
        SM++TKLNR LEPL EEL+I +P+GD LLVSEVLR
Subjt:  SMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

A0A5A7VRQ5 Gag protease polyprotein-like protein1.3e-3337.54Show/hide
Query:  PCDLEKKFGIERL----------EVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD---
        P DLEK + IERL          E LG  + +GSLSV EYE KY ELSRYA +IV  ESDRC+RFERG+R +I TPVTTIA W NFSQ++E AL+V+   
Subjt:  PCDLEKKFGIERL----------EVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVD---

Query:  --------------------GRDNAK--------------------------------------------------------------------------
                            GR+  +                                                                          
Subjt:  --------------------GRDNAK--------------------------------------------------------------------------

Query:  -----------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR
                   +  Q++AED P VIT T L+CN PA VL D  ATH FVSS+++TKLNR LEPL E L IY+P+GD LLV+EVLR
Subjt:  -----------SAYQRQAEDEPIVITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAGTGCCTTGTGATCTTGAGAAGAAATTTGGCATAGAGCGACTTGAGGTTCTAGGTGCTATAGTATTCAAAGGGTCACTTTCAGTGGATGAGTATGAAGGGAA
GTATATCGAGCTTTCACGATATGCTAAGATAATAGTTACATTTGAGAGTGATAGATGCAAGAGATTTGAGAGGGGTATACGAAAGAAGATTTGTACGCCAGTTACGACCA
TAGCTAAGTGGGCTAACTTTTCCCAGGTTGTTGAGCCTGCTTTGCAAGTAGACGGGAGAGATAATGCAAAGAGTGCTTACCAGAGGCAAGCCGAGGATGAGCCAATCGTT
ATTACTAATACATTTCTTGTTTGTAATACTCCTGCGCATGTCTTACTAGACCCAAGTGCTACACATTTCTTTGTATCTAGCATGTATATAACTAAGTTAAATAGGACGTT
AGAACCTTTACCTGAGGAATTGATTATTTATTCTCCTATTGGTGACGCTTTGCTAGTCAGTGAAGTGTTGCGAGGTGTCAGTCGAAGGTGCTCGTATGACAATGGATTTG
TTACCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCAGTGCCTTGTGATCTTGAGAAGAAATTTGGCATAGAGCGACTTGAGGTTCTAGGTGCTATAGTATTCAAAGGGTCACTTTCAGTGGATGAGTATGAAGGGAA
GTATATCGAGCTTTCACGATATGCTAAGATAATAGTTACATTTGAGAGTGATAGATGCAAGAGATTTGAGAGGGGTATACGAAAGAAGATTTGTACGCCAGTTACGACCA
TAGCTAAGTGGGCTAACTTTTCCCAGGTTGTTGAGCCTGCTTTGCAAGTAGACGGGAGAGATAATGCAAAGAGTGCTTACCAGAGGCAAGCCGAGGATGAGCCAATCGTT
ATTACTAATACATTTCTTGTTTGTAATACTCCTGCGCATGTCTTACTAGACCCAAGTGCTACACATTTCTTTGTATCTAGCATGTATATAACTAAGTTAAATAGGACGTT
AGAACCTTTACCTGAGGAATTGATTATTTATTCTCCTATTGGTGACGCTTTGCTAGTCAGTGAAGTGTTGCGAGGTGTCAGTCGAAGGTGCTCGTATGACAATGGATTTG
TTACCTCTTGA
Protein sequenceShow/hide protein sequence
MGSVPCDLEKKFGIERLEVLGAIVFKGSLSVDEYEGKYIELSRYAKIIVTFESDRCKRFERGIRKKICTPVTTIAKWANFSQVVEPALQVDGRDNAKSAYQRQAEDEPIV
ITNTFLVCNTPAHVLLDPSATHFFVSSMYITKLNRTLEPLPEELIIYSPIGDALLVSEVLRGVSRRCSYDNGFVTS