; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017710 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017710
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr08:8489177..8489725
RNA-Seq ExpressionPI0017710
SyntenyPI0017710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]5.0e-1846.31Show/hide
Query:  MAISQVNAVGSSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHTRYQNNRPQHS--HHQQQPTTTASSTSPMESL
        MA+SQV+AVG+ V A  Q+D+M  VGCG                             G++RGEA   H +   +RP +S   HQQ  T T SS S M +L
Subjt:  MAISQVNAVGSSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHTRYQNNRPQHS--HHQQQPTTTASSTSPMESL

Query:  LREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPN
        LR+YMQ+ DA +QSQ +SI NLE+ LGQLA DFS R  GSLPSN E PN
Subjt:  LREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPN

KAA0049612.1 hypothetical protein E6C27_scaffold163G00690 [Cucumis melo var. makuwa]1.8e-1268.25Show/hide
Query:  MESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSV
        ME+LLREYMQ+NDALLQ+QA+SI+NL++QL QLASD S R +GSLP++T+TPN+ GD  K SV
Subjt:  MESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSV

TYK27798.1 hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa]2.8e-2158.97Show/hide
Query:  GCVGCG---------GDHRGEASGSHTRYQNNRPQHSHHQQQ--PTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLP
        GCV CG         G + G+ASG   R   +RP HS  QQQ   T T S +S ME+L+R YM++NDALLQSQA+SIRNLE+Q+GQ+A DFSER Q  LP
Subjt:  GCVGCG---------GDHRGEASGSHTRYQNNRPQHSHHQQQ--PTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLP

Query:  SNTETPNQAGDLVKRSV
        SNTE  NQAGDL KRSV
Subjt:  SNTETPNQAGDLVKRSV

XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa]1.4e-1254.02Show/hide
Query:  QNNRPQHSHHQQQPTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSVT
        Q  RPQ  H  Q      S TS +ESL+R+YM KNDA++QSQA+S+RNLEVQLGQLA+D   R QG+LPS+TE P + G    +++T
Subjt:  QNNRPQHSHHQQQPTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSVT

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.1e-1255.17Show/hide
Query:  QNNRPQHSHHQQQPTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSVT
        Q  RPQ  H  Q      S TS +ESL+R+YM KNDA++QSQA+S+RNLEVQLGQLA+D   R QG+LPS+TE P + G    ++VT
Subjt:  QNNRPQHSHHQQQPTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSVT

TrEMBL top hitse value%identityAlignment
A0A0A0KMN3 Uncharacterized protein1.8e-1850.39Show/hide
Query:  MAISQVNAVGSSVHAANQIDDMGCVGCGGDHRGEASGSHTRYQNNRPQH-----SHHQQQPTTTASSTSP-MESLLREYMQKNDALLQSQASSIRNLEVQ
        MA+ +VNA GSS+   +Q  ++G V CGG   GE SG   R  +  PQ      +HH    + ++SS+ P MESL +EYMQ+NDALLQSQA+SI+NLE+Q
Subjt:  MAISQVNAVGSSVHAANQIDDMGCVGCGGDHRGEASGSHTRYQNNRPQH-----SHHQQQPTTTASSTSP-MESLLREYMQKNDALLQSQASSIRNLEVQ

Query:  LGQLASDFSERQQGSLPSNTETPNQAG
        +GQ+A+D S + +G+LPSNTE P Q G
Subjt:  LGQLASDFSERQQGSLPSNTETPNQAG

A0A0A0KN83 Uncharacterized protein9.8e-1271.19Show/hide
Query:  TSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAG
        T  ME+L REYMQ+NDALLQSQASSI+NLE+QLGQLA+D SER +G+L  NT+TP Q G
Subjt:  TSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAG

A0A5A7U1G5 Uncharacterized protein8.9e-1368.25Show/hide
Query:  MESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSV
        ME+LLREYMQ+NDALLQ+QA+SI+NL++QL QLASD S R +GSLP++T+TPN+ GD  K SV
Subjt:  MESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPNQAGDLVKRSV

A0A5D3D2S0 Uncharacterized protein2.4e-1846.31Show/hide
Query:  MAISQVNAVGSSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHTRYQNNRPQHS--HHQQQPTTTASSTSPMESL
        MA+SQV+AVG+ V A  Q+D+M  VGCG                             G++RGEA   H +   +RP +S   HQQ  T T SS S M +L
Subjt:  MAISQVNAVGSSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHTRYQNNRPQHS--HHQQQPTTTASSTSPMESL

Query:  LREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPN
        LR+YMQ+ DA +QSQ +SI NLE+ LGQLA DFS R  GSLPSN E PN
Subjt:  LREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLPSNTETPN

A0A5D3DWD5 Uncharacterized protein1.4e-2158.97Show/hide
Query:  GCVGCG---------GDHRGEASGSHTRYQNNRPQHSHHQQQ--PTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLP
        GCV CG         G + G+ASG   R   +RP HS  QQQ   T T S +S ME+L+R YM++NDALLQSQA+SIRNLE+Q+GQ+A DFSER Q  LP
Subjt:  GCVGCG---------GDHRGEASGSHTRYQNNRPQHSHHQQQ--PTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSLP

Query:  SNTETPNQAGDLVKRSV
        SNTE  NQAGDL KRSV
Subjt:  SNTETPNQAGDLVKRSV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAAGTCAATGCCGTAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGGGATGCGTGGGATGCGGCGGTGACCATCGCGGGGAAGCATCTGG
CTCCCACACGAGGTACCAAAACAATAGACCCCAACACTCCCATCATCAACAGCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTTCTCCGCGAATACA
TGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGAAAGACAGCAAGGATCCCTC
CCAAGCAATACAGAAACGCCAAATCAGGCGGGGGATCTGGTAAAGAGAAGTGTCACGCGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAAGTCAATGCCGTAGGAAGCTCTGTGCACGCGGCTAACCAAATTGATGACATGGGATGCGTGGGATGCGGCGGTGACCATCGCGGGGAAGCATCTGG
CTCCCACACGAGGTACCAAAACAATAGACCCCAACACTCCCATCATCAACAGCAGCCCACCACCACCGCCTCATCCACCTCTCCCATGGAAAGTCTTCTCCGCGAATACA
TGCAGAAAAATGATGCTCTTCTGCAAAGCCAAGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTCGCTAGTGATTTCTCCGAAAGACAGCAAGGATCCCTC
CCAAGCAATACAGAAACGCCAAATCAGGCGGGGGATCTGGTAAAGAGAAGTGTCACGCGGTGA
Protein sequenceShow/hide protein sequence
MAISQVNAVGSSVHAANQIDDMGCVGCGGDHRGEASGSHTRYQNNRPQHSHHQQQPTTTASSTSPMESLLREYMQKNDALLQSQASSIRNLEVQLGQLASDFSERQQGSL
PSNTETPNQAGDLVKRSVTR