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PI0017719 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017719
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr05:8678794..8680500
RNA-Seq ExpressionPI0017719
SyntenyPI0017719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037491.1 hypothetical protein E6C27_scaffold277G00910 [Cucumis melo var. makuwa]6.0e-0446.15Show/hide
Query:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESGKHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        M NS HVL  D GAS+ L      +     L+  K F +  +   NVY    V+G  QHSHRLCRS ARP LTTAS +
Subjt:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESGKHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

KAA0041133.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.1e-0572.73Show/hide
Query:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        KHF R T  +TNVY    VVGPTQHSHRLCRS ARPALTTAS +
Subjt:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

KAA0054428.1 hypothetical protein E6C27_scaffold24G001800 [Cucumis melo var. makuwa]5.9e-1262.5Show/hide
Query:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFVTEYTQCQQQNLTCVHTVPYSLRLNISVM
        KHF R T S+TNVY    VVGP QHSH L RS AR AL  +  V EY Q QQ NLTCVH +PYSL LN SV+
Subjt:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFVTEYTQCQQQNLTCVHTVPYSLRLNISVM

KAA0056456.1 hypothetical protein E6C27_scaffold186G002270 [Cucumis melo var. makuwa]1.2e-0444.83Show/hide
Query:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESG---------KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        M+NSNHV+     + SKL+        ++Y   G         KHF + T ++T VY    VVG TQHSHRLCRS ARPALTT S +
Subjt:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESG---------KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

TYK02475.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.2e-0468.18Show/hide
Query:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        KHF R T ++TNVY    VVGPTQ+SHRLCRS A PALTTAS +
Subjt:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

TrEMBL top hitse value%identityAlignment
A0A5A7T7D6 Uncharacterized protein2.9e-0446.15Show/hide
Query:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESGKHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        M NS HVL  D GAS+ L      +     L+  K F +  +   NVY    V+G  QHSHRLCRS ARP LTTAS +
Subjt:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESGKHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

A0A5A7TDA8 Retrovirus-related Pol polyprotein from transposon 17.65.3e-0672.73Show/hide
Query:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        KHF R T  +TNVY    VVGPTQHSHRLCRS ARPALTTAS +
Subjt:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

A0A5A7UHH6 Uncharacterized protein2.9e-1262.5Show/hide
Query:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFVTEYTQCQQQNLTCVHTVPYSLRLNISVM
        KHF R T S+TNVY    VVGP QHSH L RS AR AL  +  V EY Q QQ NLTCVH +PYSL LN SV+
Subjt:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFVTEYTQCQQQNLTCVHTVPYSLRLNISVM

A0A5A7UQ77 Uncharacterized protein5.8e-0544.83Show/hide
Query:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESG---------KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        M+NSNHV+     + SKL+        ++Y   G         KHF + T ++T VY    VVG TQHSHRLCRS ARPALTT S +
Subjt:  MYNSNHVLANDLGASSKLRQPIRNQELDLYLESG---------KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

A0A5D3BTH0 Retrovirus-related Pol polyprotein from transposon 17.65.8e-0568.18Show/hide
Query:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV
        KHF R T ++TNVY    VVGPTQ+SHRLCRS A PALTTAS +
Subjt:  KHFERDTSSSTNVYY---VVGPTQHSHRLCRSEARPALTTASFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAACTCCAACCACGTACTGGCTAATGATCTGGGAGCTTCCAGCAAACTAAGGCAGCCTATCAGAAACCAGGAGCTCGATCTCTACCTGGAAAGTGGAAAACATTT
TGAAAGGGACACGTCCAGTTCAACCAACGTTTACTATGTAGTGGGGCCCACCCAGCACTCCCATCGTCTTTGTCGTAGTGAGGCTCGTCCAGCACTCACGACAGCATCGT
TTGTTACAGAGTACACTCAATGTCAACAACAGAATCTAACCTGTGTGCACACGGTACCATATAGCCTTAGGCTCAACATCTCAGTCATGAAAGAAAATGAGATTCCCAAC
AGATTGCTACAGAAATCACCCAACTTACTTGATATCTGGTCTCGTATCATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGACGTTGAGTTGTCTTGGAGGAT
GTTCATGATCTTATCTAGTGCTTTCCATTGCTGCTGTTTGGTTGTTTTTTTTGTGGATTGGTTTTCCTTTTGCTTTCTTGGCTCTGGTGCTTTGGCCTCGGGTTGTGAGG
TCCTCCTTGTTTTTGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTACAACTCCAACCACGTACTGGCTAATGATCTGGGAGCTTCCAGCAAACTAAGGCAGCCTATCAGAAACCAGGAGCTCGATCTCTACCTGGAAAGTGGAAAACATTT
TGAAAGGGACACGTCCAGTTCAACCAACGTTTACTATGTAGTGGGGCCCACCCAGCACTCCCATCGTCTTTGTCGTAGTGAGGCTCGTCCAGCACTCACGACAGCATCGT
TTGTTACAGAGTACACTCAATGTCAACAACAGAATCTAACCTGTGTGCACACGGTACCATATAGCCTTAGGCTCAACATCTCAGTCATGAAAGAAAATGAGATTCCCAAC
AGATTGCTACAGAAATCACCCAACTTACTTGATATCTGGTCTCGTATCATTCGGGATATGGCGTCCTCTCATAGGGTTGGGGGGTGGGACGTTGAGTTGTCTTGGAGGAT
GTTCATGATCTTATCTAGTGCTTTCCATTGCTGCTGTTTGGTTGTTTTTTTTGTGGATTGGTTTTCCTTTTGCTTTCTTGGCTCTGGTGCTTTGGCCTCGGGTTGTGAGG
TCCTCCTTGTTTTTGTATAA
Protein sequenceShow/hide protein sequence
MYNSNHVLANDLGASSKLRQPIRNQELDLYLESGKHFERDTSSSTNVYYVVGPTQHSHRLCRSEARPALTTASFVTEYTQCQQQNLTCVHTVPYSLRLNISVMKENEIPN
RLLQKSPNLLDIWSRIIRDMASSHRVGGWDVELSWRMFMILSSAFHCCCLVVFFVDWFSFCFLGSGALASGCEVLLVFV