; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017738 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017738
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:6398978..6399883
RNA-Seq ExpressionPI0017738
SyntenyPI0017738
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]3.8e-4548.19Show/hide
Query:  LDILKGEFSLTIKCWTICKKHCWITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGR
        ++ LKG +SL+I   T CKK CWITNVYGP DY ERR +W  L +++  C   W I G  N  R   E FP+ + +R MR FN  I   N+ E+PL NGR
Subjt:  LDILKGEFSLTIKCWTICKKHCWITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGR

Query:  YTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVI
         TWSREG  IS+SL+D F +  +W+E  ENSRV R+   ISDHFP+LLEAG+ +  PSPFRF ++W    +C R+ +          WAGFV+
Subjt:  YTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVI

XP_038884535.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]9.7e-4961.45Show/hide
Query:  LVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYR
        LVS  W+E FE+SRV+RQ R ISDHFP+L EAGAFE  PSPFRFC++W K+K+CCR+ E+S     QQ WAGF +YS+ R++K  +K+WLA+ EK +K R
Subjt:  LVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYR

Query:  EEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
        EE LLKEI+ +D  A+  E  S EED+RV+LKA+LL+ YQ EER+L+QKSKLNWL L DENT+FFH
Subjt:  EEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

XP_038884536.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida]9.7e-4961.45Show/hide
Query:  LVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYR
        LVS  W+E FE+SRV+RQ R ISDHFP+L EAGAFE  PSPFRFC++W K+K+CCR+ E+S     QQ WAGF +YS+ R++K  +K+WLA+ EK +K R
Subjt:  LVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYR

Query:  EEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
        EE LLKEI+ +D  A+  E  S EED+RV+LKA+LL+ YQ EER+L+QKSKLNWL L DENT+FFH
Subjt:  EEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

XP_038884537.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida]9.7e-4961.45Show/hide
Query:  LVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYR
        LVS  W+E FE+SRV+RQ R ISDHFP+L EAGAFE  PSPFRFC++W K+K+CCR+ E+S     QQ WAGF +YS+ R++K  +K+WLA+ EK +K R
Subjt:  LVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYR

Query:  EEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
        EE LLKEI+ +D  A+  E  S EED+RV+LKA+LL+ YQ EER+L+QKSKLNWL L DENT+FFH
Subjt:  EEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

XP_038904301.1 uncharacterized protein LOC120090656 [Benincasa hispida]1.9e-6853.66Show/hide
Query:  LWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGRYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLR
        +WAEL+++A+  ++PW I  +FNSIRRR ERFP+GR +RDM NFN FI  NNL+E PLSNG++TWSREG+V SKSL+D FLVS+ WE+ F+NSRV RQ R
Subjt:  LWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGRYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLR

Query:  AISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEV
         +SDHFP+ LEAGAFE  PS FRFC++W  +K+ C+L E SL       WA   + +  RK K+ +KKW  +F K+ K +EE LL E++R+D +      
Subjt:  AISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEV

Query:  PSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
            +D   +LKA+LLA YQ+EE++L+QK KL WL   DENT+FFH
Subjt:  PSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

TrEMBL top hitse value%identityAlignment
A0A2N9F2D2 Reverse transcriptase domain-containing protein6.8e-4037.77Show/hide
Query:  FSLTIKCWTICKKHCW-ITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGRYTWSRE
        FS++ K   +     W +++VYGP    ER+ +W EL  ++     PW + GDFN +R  SER      S  M  F+ FI + +L++IPL  GR+TWS+ 
Subjt:  FSLTIKCWTICKKHCW-ITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGRYTWSRE

Query:  GEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFE-CPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKK
         E  S S IDRFL S+ W++ F N    R  R +SDHFPILLE GA +    PFRF + W K        +     Y   G   F+  SK + LK DIKK
Subjt:  GEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFE-CPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTDIKK

Query:  WLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
        W  +     + R+  L K+++  D +AE   +   E D R   +AE+     MEE    QKS++ WL   D NT FFH
Subjt:  WLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

A0A2N9F2D8 Reverse transcriptase domain-containing protein2.3e-4036.49Show/hide
Query:  LDILKGEFSLTIKCWTICKKHCW-ITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNG
        +++  G FS++ K   +     W +++VYGP    ER  +W EL  ++     PW + GDFN +R  SER      S  M  F+ FI + +L++IPL  G
Subjt:  LDILKGEFSLTIKCWTICKKHCW-ITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNG

Query:  RYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFE-CPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRK
        R+TWS   E  S S IDRFL S+ W++ F N    R  R +SDHFPILLE G  +    PFRF + W K        +     Y+  G   F+  SK + 
Subjt:  RYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFE-CPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRK

Query:  LKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
        LK DIKKW  +     + R+  L K+++  D +AE   +   E D R   +A+L     M+E    QKS++ WL   D NT FFH
Subjt:  LKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

A0A2N9I500 Reverse transcriptase domain-containing protein4.7e-4137.19Show/hide
Query:  LDILKGEFSLTIKCWTICKKHCW-ITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNG
        +D   G FS++ K   +  ++ W  + VYGP   RERR +W EL+ +A   + PW + GDFN +R  SER    + +  M NF+ FI    L +I L  G
Subjt:  LDILKGEFSLTIKCWTICKKHCW-ITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNG

Query:  RYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFECPS-PFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRK
        RYTWS   E  + S IDRFL SN WE+ F      R  R +SDHFPI+LE+G F   + PFRF + W K +    L +     Y+ +G   F++  K + 
Subjt:  RYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFECPS-PFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRK

Query:  LKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
        LK+D+KKW  +      ++   L+ E+ + D   E   +   E++ R  + AEL  N  M E +  QKS++ WL   D+NT FFH
Subjt:  LKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

A0A2N9IQ74 Reverse transcriptase domain-containing protein6.8e-4037.24Show/hide
Query:  LDILKGEFSLTIKCWTICKKHCWI-TNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRD-----MRNFNIFIVENNLMEI
        +D   G FS++ K      ++ W+ + VYGP   RERR +W EL  +      PW + GDFN I     RFP+ R S D     M +F+ FI    L +I
Subjt:  LDILKGEFSLTIKCWTICKKHCWI-TNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRD-----MRNFNIFIVENNLMEI

Query:  PLSNGRYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFECPS-PFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIY
        PL  GRYTWS   E  + S IDRFL S+ WE+ F      R  R +SDHFPI+LE G F   + PFRF + W K +    L +     Y+ QG   F++ 
Subjt:  PLSNGRYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFECPS-PFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIY

Query:  SKFRKLKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH
         K + LK+D+KKW  +      ++   L+ E+ + D   E   +   E++ R  + A+L +N  MEE +  QKS+  WL   D+NT FFH
Subjt:  SKFRKLKTDIKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH

A0A5D3BHE3 Uncharacterized protein1.8e-4548.19Show/hide
Query:  LDILKGEFSLTIKCWTICKKHCWITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGR
        ++ LKG +SL+I   T CKK CWITNVYGP DY ERR +W  L +++  C   W I G  N  R   E FP+ + +R MR FN  I   N+ E+PL NGR
Subjt:  LDILKGEFSLTIKCWTICKKHCWITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLMEIPLSNGR

Query:  YTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVI
         TWSREG  IS+SL+D F +  +W+E  ENSRV R+   ISDHFP+LLEAG+ +  PSPFRF ++W    +C R+ +          WAGFV+
Subjt:  YTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFEC-PSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G40390.1 DNAse I-like superfamily protein1.6e-0925.84Show/hide
Query:  ERRRLWAELTTIADS---CNEPWSIDGDFNSIRRRSERF---PMGRGSRDMRNFNIFIVENNLMEIPLSNGRYTWS---REGEVISKSLIDRFLVSNKWE
        ERR LW ++T ++ S   CN PW + GDFN I   +E +   P     + + +    + +++L+++P     YTWS   ++  ++ K  +DR +V+  W 
Subjt:  ERRRLWAELTTIADS---CNEPWSIDGDFNSIRRRSERF---PMGRGSRDMRNFNIFIVENNLMEIPLSNGRYTWS---REGEVISKSLIDRFLVSNKWE

Query:  EAFENSRVTRQLRAISDH---FPILLEAGAFECPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLK
          F  +       + SDH     IL  +        F++ S  S   D      S LA ++++   G  ++S    LK
Subjt:  EAFENSRVTRQLRAISDH---FPILLEAGAFECPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGATCCAGAGGCATTCTTACATTGTGGGACGAAGGAAAGATTTCCTTGTCTCGACATTCTTAAGGGGGAGTTCTCACTAACGATAAAATGCTGGACAATTTGCAA
AAAACACTGCTGGATAACTAATGTTTATGGTCCTACTGATTATCGAGAAAGAAGGAGACTATGGGCGGAACTGACAACTATTGCTGATTCGTGTAATGAACCTTGGAGTA
TCGACGGAGATTTCAATAGTATTCGACGAAGAAGTGAAAGATTCCCAATGGGAAGAGGTTCAAGGGACATGAGAAACTTCAATATATTCATCGTGGAAAATAATTTGATG
GAAATTCCTCTTTCAAATGGCCGTTACACTTGGTCTAGGGAAGGGGAAGTAATCTCTAAATCTCTTATTGACAGATTTCTGGTTTCTAACAAATGGGAGGAAGCATTTGA
GAATTCAAGAGTGACAAGGCAATTGCGTGCCATATCCGATCACTTCCCTATTTTATTGGAGGCTGGAGCTTTTGAATGCCCAAGCCCATTTCGGTTCTGTAGCGCTTGGT
CAAAAGATAAGGATTGTTGTAGGCTTACTGAAAGTTCCTTAGCACCATATAGACAGCAAGGTTGGGCAGGATTTGTAATTTACTCCAAGTTCAGAAAGTTAAAAACAGAT
ATAAAAAAGTGGCTTGCTGATTTTGAAAAACAGAAGAAGTACAGGGAAGAGTTTCTGTTGAAAGAAATAGAAAGAAGAGATCAAATGGCAGAATTTGAAGAAGTTCCCTC
CTTTGAAGAAGACTTAAGGGTAGCTTTAAAAGCAGAATTGTTGGCAAACTACCAAATGGAGGAAAGGAATCTTATGCAGAAAAGTAAACTGAATTGGTTGAATTTGGCAG
ATGAAAACACTAATTTTTTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGATCCAGAGGCATTCTTACATTGTGGGACGAAGGAAAGATTTCCTTGTCTCGACATTCTTAAGGGGGAGTTCTCACTAACGATAAAATGCTGGACAATTTGCAA
AAAACACTGCTGGATAACTAATGTTTATGGTCCTACTGATTATCGAGAAAGAAGGAGACTATGGGCGGAACTGACAACTATTGCTGATTCGTGTAATGAACCTTGGAGTA
TCGACGGAGATTTCAATAGTATTCGACGAAGAAGTGAAAGATTCCCAATGGGAAGAGGTTCAAGGGACATGAGAAACTTCAATATATTCATCGTGGAAAATAATTTGATG
GAAATTCCTCTTTCAAATGGCCGTTACACTTGGTCTAGGGAAGGGGAAGTAATCTCTAAATCTCTTATTGACAGATTTCTGGTTTCTAACAAATGGGAGGAAGCATTTGA
GAATTCAAGAGTGACAAGGCAATTGCGTGCCATATCCGATCACTTCCCTATTTTATTGGAGGCTGGAGCTTTTGAATGCCCAAGCCCATTTCGGTTCTGTAGCGCTTGGT
CAAAAGATAAGGATTGTTGTAGGCTTACTGAAAGTTCCTTAGCACCATATAGACAGCAAGGTTGGGCAGGATTTGTAATTTACTCCAAGTTCAGAAAGTTAAAAACAGAT
ATAAAAAAGTGGCTTGCTGATTTTGAAAAACAGAAGAAGTACAGGGAAGAGTTTCTGTTGAAAGAAATAGAAAGAAGAGATCAAATGGCAGAATTTGAAGAAGTTCCCTC
CTTTGAAGAAGACTTAAGGGTAGCTTTAAAAGCAGAATTGTTGGCAAACTACCAAATGGAGGAAAGGAATCTTATGCAGAAAAGTAAACTGAATTGGTTGAATTTGGCAG
ATGAAAACACTAATTTTTTCCATTGA
Protein sequenceShow/hide protein sequence
MRDPEAFLHCGTKERFPCLDILKGEFSLTIKCWTICKKHCWITNVYGPTDYRERRRLWAELTTIADSCNEPWSIDGDFNSIRRRSERFPMGRGSRDMRNFNIFIVENNLM
EIPLSNGRYTWSREGEVISKSLIDRFLVSNKWEEAFENSRVTRQLRAISDHFPILLEAGAFECPSPFRFCSAWSKDKDCCRLTESSLAPYRQQGWAGFVIYSKFRKLKTD
IKKWLADFEKQKKYREEFLLKEIERRDQMAEFEEVPSFEEDLRVALKAELLANYQMEERNLMQKSKLNWLNLADENTNFFH