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PI0017778 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017778
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein SIS2
Genome locationchr09:10889313..10891368
RNA-Seq ExpressionPI0017778
SyntenyPI0017778
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050184.1 protein SIS2 [Cucumis melo var. makuwa]5.1e-5070.06Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------
        MAR LISTR FPFSSLP+APPRA FRP  FSPPVRFSAHPS SRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE        
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------

Query:  -----------------------------------LALNQAIMEEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
                                           LALNQAIMEEDEDYE+DG+EISFEEKPTLPRTRNRPKREAEV
Subjt:  -----------------------------------LALNQAIMEEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

XP_004140287.1 uncharacterized protein LOC101209610 [Cucumis sativus]2.0e-5491.79Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFS+LP+APPR  FRPSIFSPPVRF A+PS SRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        EEDEDY EDGSEISFEEKPT+PRTRNRPKREAEV
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

XP_008465810.1 PREDICTED: uncharacterized protein LOC103503402 [Cucumis melo]2.8e-5692.54Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFSSLP+APPRA FRP  FSPPVRFSAHPS SRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        EEDEDYE+DG+EISFEEKPTLPRTRNRPKREAEV
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]1.8e-4782.09Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF  LP+ P RA FRPS  SP VRFS  PSA+R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        EEDE+ ++  SEISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

XP_038875344.1 uncharacterized protein LOC120067823 [Benincasa hispida]1.6e-5188.06Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MA+LLISTR FPFSSL VAPPRA FRPS FSP V FS +PS SR LRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        EEDE+ ++DGSEISFEEKP LPRTRNRPKREAEV
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein9.7e-5591.79Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFS+LP+APPR  FRPSIFSPPVRF A+PS SRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        EEDEDY EDGSEISFEEKPT+PRTRNRPKREAEV
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

A0A1S3CQ37 uncharacterized protein LOC1035034021.3e-5692.54Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPFSSLP+APPRA FRP  FSPPVRFSAHPS SRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        EEDEDYE+DG+EISFEEKPTLPRTRNRPKREAEV
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

A0A5D3BGL2 Protein SIS22.5e-5070.06Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------
        MAR LISTR FPFSSLP+APPRA FRP  FSPPVRFSAHPS SRTLRVV TRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE        
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEE--------

Query:  -----------------------------------LALNQAIMEEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
                                           LALNQAIMEEDEDYE+DG+EISFEEKPTLPRTRNRPKREAEV
Subjt:  -----------------------------------LALNQAIMEEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447531.1e-4580.74Show/hide
Query:  MARLLISTR-LFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP S+LPVAP RA FRPS  SP VRF    SA +TLR+VTTRAGASTSSYIFAFSIP SL+L+T LTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTR-LFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV
        MEEDE+ ++DGS ISFEEKP LPRTRNRPKREAEV
Subjt:  MEEDEDYEEDGSEISFEEKPTLPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623101.3e-4681.2Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF  LP+ P RA FRPS  SP VRFS  PSA+R LRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAE
        EEDE+ ++  SEI FEEKP LPRTRNRPKREAE
Subjt:  EEDEDYEEDGSEISFEEKPTLPRTRNRPKREAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1531.5e-1545Show/hide
Query:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSA-----SRTLR--VVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEEL
        MARL +S    P     ++ P +  +P + SPP        A     +R +R   V TRAG STSSY+ AF+IP +LI  TV T++KI D LD+ FLE++
Subjt:  MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSA-----SRTLR--VVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEEL

Query:  ALNQAI--MEEDEDYEEDGSEISFEEKPTLPRTRNRPKRE
        ALNQAI   E+ E+ E D S     ++P L RTRNRPKRE
Subjt:  ALNQAI--MEEDEDYEEDGSEISFEEKPTLPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGGCTCCTTATCTCCACCCGACTCTTTCCCTTTTCCTCTCTCCCCGTTGCTCCGCCACGGGCAATCTTCAGACCCTCCATTTTTTCGCCGCCGGTCAGATTCTC
CGCCCACCCATCGGCGTCCAGAACCTTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCATCCCTTTGTCTCTTATTCTCATCA
CTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGATTACGAAGAAGATGGT
TCAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAA
mRNA sequenceShow/hide mRNA sequence
CAATTCCACACTCTTCCAATAGCTATGGCCAGGCTCCTTATCTCCACCCGACTCTTTCCCTTTTCCTCTCTCCCCGTTGCTCCGCCACGGGCAATCTTCAGACCCTCCAT
TTTTTCGCCGCCGGTCAGATTCTCCGCCCACCCATCGGCGTCCAGAACCTTACGAGTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCCA
TCCCTTTGTCTCTTATTCTCATCACTGTCCTCACCGCCCTTAAAATCGGCGATAACCTTGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAA
GATGAGGATTACGAAGAAGATGGTTCAGAAATATCTTTTGAAGAAAAACCAACTCTTCCACGAACTCGAAATCGACCTAAAAGAGAAGCTGAGGTATAAATAAACTGCTT
ACATTTTTTTGGAGGTGTTCATATGATCGGATCAGGTGGCTGAGAAATGGTTCAAGGAACTAAGAAACTTCCATGTATATTGTATGTAATTTTTCCCCCTTAATAATGAT
TAGCTAAAAAGTTAGTTGGAATGCTGAGTAACTTAGATATTTAATTACGTTATTGCATATTCTTCAAATTGAAATATCTTTCTAGTGGCCTTGATTATGCTCATCATTCG
GTAAAAATATCATTAATGGTTCAAATTCAGTTCTTAAATTTTTAATAAAATTTTAGTTCTTCGTAGTTATTCTTTTAATCTAAA
Protein sequenceShow/hide protein sequence
MARLLISTRLFPFSSLPVAPPRAIFRPSIFSPPVRFSAHPSASRTLRVVTTRAGASTSSYIFAFSIPLSLILITVLTALKIGDNLDKKFLEELALNQAIMEEDEDYEEDG
SEISFEEKPTLPRTRNRPKREAEV