; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017835 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017835
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsignal recognition particle 43 kDa protein, chloroplastic
Genome locationchr01:4830824..4832673
RNA-Seq ExpressionPI0017835
SyntenyPI0017835
Gene Ontology termsGO:0009644 - response to high light intensity (biological process)
GO:0045038 - protein import into chloroplast thylakoid membrane (biological process)
GO:0070208 - protein heterotrimerization (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0080085 - signal recognition particle, chloroplast targeting (cellular component)
GO:0030674 - protein binding, bridging (molecular function)
GO:0042802 - identical protein binding (molecular function)
GO:0097718 - disordered domain specific binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR002110 - Ankyrin repeat
IPR016197 - Chromo-like domain superfamily
IPR020683 - Ankyrin repeat-containing domain
IPR023780 - Chromo domain
IPR030300 - Signal recognition particle 43kDa protein
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645681.1 hypothetical protein Csa_020568 [Cucumis sativus]5.6e-18492.46Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        M+AVFLNQSLSRLKLPPKTPL    PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT+KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LA+AG NLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
        LVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGLEKVI AV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Subjt:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
        GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN

KAG6589032.1 Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-16480.53Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHS
        MDAVF+NQSLSRLKLPPK PLP     PSPI HL+LRR F  FTAYAV  ++P+TQQT++    PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHS
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPE
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+R LAEAGA+L+HRD SGGFTALHMAAGYVKP 
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPE

Query:  TVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA
        TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF RRLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Subjt:  TVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------------AQSSNG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q            AQSSNG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------------AQSSNG

XP_004153574.1 signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]2.0e-19496.37Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        M+AVFLNQSLSRLKLPPKTPL    PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT+KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LA+AG NLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
        LVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGLEKVI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Subjt:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
        GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN

XP_008447899.1 PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo]1.4e-19596.63Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        M+AVFLNQSLSRLKLPPK PLP+PIPFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LAEAG NLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
        LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD+EA
Subjt:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS
        GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS

XP_038888741.1 signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]2.0e-18188.24Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        MDAVF+NQSLSRLKL PK PLP P    S  PHLNLRRNF HFT YAVQSDQP+TQQT+K EDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWV
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKADESALKSLID+GD RDFDAVDEDGRTALLFV+GLGS  CVR LAEAG NL+HRDNSGGFTALH+AAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
        LVELGADPEIEDEKGRT L LAKEILKATPRVQFMRR+GLE+VIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
Subjt:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKA------------QAQSSNGSAL
        GLEYAVAEAVVGKR GDDGKMEYLVKWTDIQDATWEP DNVDPDLI EFEKA            QAQSSNGSAL
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKA------------QAQSSNGSAL

TrEMBL top hitse value%identityAlignment
A0A0A0K634 Uncharacterized protein9.8e-19596.37Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        M+AVFLNQSLSRLKLPPKTPL    PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT+KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LA+AG NLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
        LVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGLEKVI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Subjt:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
        GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN

A0A1S3BHX6 signal recognition particle 43 kDa protein, chloroplastic6.8e-19696.63Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
        M+AVFLNQSLSRLKLPPK PLP+PIPFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWV

Query:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL
        PSDFIAKDVVAEYETPWWTAAKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LAEAG NLNHRDNSGGFTALHMAAGYVKPETVEL
Subjt:  PSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVEL

Query:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
        LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD+EA
Subjt:  LVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA

Query:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS
        GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+
Subjt:  GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS

A0A6J1C248 signal recognition particle 43 kDa protein, chloroplastic1.6e-15778.36Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTR------KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDG
        MDA+FLNQS+SRLK+ PK+  P+P  +PS IP+ NL+     F+A AVQ+DQ + QQ+       K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDG
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTR------KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDG

Query:  HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVK
        H+PSWVPSDFIA+DVVAEYETPWWTAAKKADESALKSLID+ D RD DAVDEDGRTALLFV+GLGS  CVR LAE GAN++HRDNSGGFTALHMAAGYVK
Subjt:  HSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVK

Query:  PETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDL
        P  VE L++LGA PE+EDEKGRTALELA+EILKATPR+QF RR+GLE+V+GA+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DL
Subjt:  PETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDL

Query:  VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNG
        VADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQAQSSNG
Subjt:  VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNG

A0A6J1EP65 signal recognition particle 43 kDa protein, chloroplastic-like1.4e-16480.53Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHS
        MDAVF+NQSLSRLKLPPK PLP     PSPI HL+LRR F  FTAYAV  ++P+TQQT++    PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHS
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPE
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+R LAEAGA+L+HRD SGGFTALHMAAGYVKP 
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPE

Query:  TVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA
        TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF RRLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Subjt:  TVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------------AQSSNG
        DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q            AQSSNG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------------AQSSNG

A0A6J1JM92 signal recognition particle 43 kDa protein, chloroplastic3.4e-16380.27Show/hide
Query:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHS
        MDAVF+NQSLS LKLPPK PLP     PSPI HL+LRR F  FTAYAV  ++P+TQQT++    PEDDESYGEVDGIIGSR+L DATGMEYLIKWKDGHS
Subjt:  MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHS

Query:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPE
        PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  CVR LAEAGA+L+HRD SGGFTALHMAAGYVKP 
Subjt:  PSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPE

Query:  TVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA
        TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF RRLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Subjt:  TVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA

Query:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------------AQSSNG
        DFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEP  NVD DLI EFE  Q            AQSSNG
Subjt:  DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ------------AQSSNG

SwissProt top hitse value%identityAlignment
O22265 Signal recognition particle 43 kDa protein, chloroplastic4.8e-11461.88Show/hide
Query:  AVFLNQSLSRLKL-PPKTPLPIPIPF-PSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--RKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH
        A+ ++QSLSR+KL PPK+       F P  +P   +   F      AVQ +   T  +     EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGH
Subjt:  AVFLNQSLSRLKL-PPKTPLPIPIPF-PSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--RKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKP
        SPSWVPS +IA DVV+EYETPWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR LAEAGA+L+HRD  GG TALHMAAGYV+P
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKP

Query:  ETVELLVELGADPEIEDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE
        E VE LVELGAD E+EDE+G TALELA+EILK TP+   +QF RR+GLEKVI  +E  V+EYAEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Subjt:  ETVELLVELGADPEIEDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE

Query:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ
        D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++ Q
Subjt:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ

Q8LSQ2 Probable signal recognition particle 43 kDa protein, chloroplastic1.9e-9450.78Show/hide
Query:  MDAVFLNQSLSRLKLP----PKTP-LPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQ--PITQQTRKPEDDESYGEVDGIIGSRALPD-----------A
        M+AV  + SLSRLK P     +TP L I +PF   +P+  L       TA AV  DQ  P    ++  +DDE+YGEVD I+ SR + +            
Subjt:  MDAVFLNQSLSRLKLP----PKTP-LPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQ--PITQQTRKPEDDESYGEVDGIIGSRALPD-----------A

Query:  TGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLI-DSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS-
        T  EYL++WKDGH PSW+P++ IA DVVAEYETPWWTAAKKAD + + +L+ D    RD DA D  GRTA+ F +GLGS ECVR LAEAGA++   + + 
Subjt:  TGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLI-DSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS-

Query:  GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWK
        GG T LH+A GY +P  V  L+ELGA+PE  D +GRT LEL +++L  TP+     F RRL LE     +EK VYE+ EVE++++ RG+G+  EYLV+W+
Subjt:  GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWK

Query:  DGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNG
        DG D EWV+   +AEDLV DF+AGLEYAVAEAVV KR     +GK EYLVKW DI++ATWEP +NVD +L+ EFE+ Q+  + G
Subjt:  DGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNG

Q9SAR5 Ankyrin repeat domain-containing protein 2A2.2e-1035.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +   T LH AAGY + E V LL+E GA   +++   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

Q9VL06 E3 ubiquitin-protein ligase Ufd48.5e-1036.19Show/hide
Query:  KKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALEL
        +  D  AL+  I+SG   D + +D+ G+T L + S  G++E V  L E GA++N    S   ++LH AA + +P   ++L++ GA P++ DE G+T L+ 
Subjt:  KKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALEL

Query:  AKEIL
        A+E L
Subjt:  AKEIL

V6CLA2 E3 ubiquitin-protein ligase hecd-11.3e-1033.07Show/hide
Query:  SWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPET
        S V  D+ A             A ++ D +AL   I+SG + D +  D+ G++   + S  GS+E V+ L + G+++N    S   ++LH AA + +P+ 
Subjt:  SWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPET

Query:  VELLVELGADPEIEDEKGRTALELAKE
        V+LL++ GA+P++ DE G+TAL+ A+E
Subjt:  VELLVELGADPEIEDEKGRTALELAKE

Arabidopsis top hitse value%identityAlignment
AT2G47450.1 chloroplast signal recognition particle component (CAO)3.4e-11561.88Show/hide
Query:  AVFLNQSLSRLKL-PPKTPLPIPIPF-PSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--RKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH
        A+ ++QSLSR+KL PPK+       F P  +P   +   F      AVQ +   T  +     EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGH
Subjt:  AVFLNQSLSRLKL-PPKTPLPIPIPF-PSPIPHLNLRRNFTHFTAYAVQSDQPITQQT--RKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGH

Query:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKP
        SPSWVPS +IA DVV+EYETPWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR LAEAGA+L+HRD  GG TALHMAAGYV+P
Subjt:  SPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKP

Query:  ETVELLVELGADPEIEDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE
        E VE LVELGAD E+EDE+G TALELA+EILK TP+   +QF RR+GLEKVI  +E  V+EYAEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Subjt:  ETVELLVELGADPEIEDEKGRTALELAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE

Query:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ
        D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++ Q
Subjt:  DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ

AT4G35450.1 ankyrin repeat-containing protein 21.6e-1135.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +   T LH AAGY + E V LL+E GA   +++   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

AT4G35450.2 ankyrin repeat-containing protein 21.6e-1135.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +   T LH AAGY + E V LL+E GA   +++   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

AT4G35450.3 ankyrin repeat-containing protein 21.6e-1135.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +   T LH AAGY + E V LL+E GA   +++   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM

AT4G35450.4 ankyrin repeat-containing protein 21.6e-1135.83Show/hide
Query:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE
        A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +   T LH AAGY + E V LL+E GA   +++   +T ++
Subjt:  AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE

Query:  LAK-----EILKATPRVQFM
        +AK     E++K   +  F+
Subjt:  LAK-----EILKATPRVQFM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTATCCCGATCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCG
CCGCAACTTTACCCATTTCACCGCTTATGCGGTTCAAAGCGATCAACCCATCACGCAACAAACCCGCAAACCAGAAGACGATGAATCCTACGGCGAAGTCGATGGCATCA
TCGGCAGCCGTGCTTTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTA
GCCGAGTACGAAACTCCTTGGTGGACCGCCGCTAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGA
TGGGAGAACTGCTCTTCTGTTTGTTTCTGGACTTGGGTCTGTGGAATGTGTGAGAACATTGGCGGAAGCCGGTGCGAATCTTAACCACCGTGATAACAGTGGTGGGTTTA
CGGCTTTGCATATGGCGGCTGGGTATGTGAAACCAGAGACAGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGAAGATGAGAAGGGACGGACGGCGTTGGAG
TTAGCTAAGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCGGAGCGGTGGAGAAGGTGGTTTATGAGTATGCGGAGGT
GGAGGAATTGTTGGAAAAGAGAGGGAAAGGGGAGAATTTGGAGTATTTAGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGATT
TGGTGGCAGATTTTGAAGCAGGGTTGGAATATGCAGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATA
CAAGATGCCACGTGGGAGCCTTTGGATAATGTGGATCCTGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTAACAAAATTTGTAACATGATGCTAATTTAAAGGTTGAACTAAAAGTGTTAAAAATTAGTGGAAACTAAGTTTTAATGGATGTAGAACTTAATTGAATCAGTGTTG
GATACTTTCTGTCTTGTTTCCAACTTCCATTCACTTTATTTGTTGATTTTTTGGTTAAAAGAAGTGTCTAAACTAAATCCAATTCAAAGTTAAGAGCTGTGAAATAAACC
AAAAAACCAACACACTAACAAAATATTGAAAATTTCTCTAACTAAAATGACAGCCATGGATTCCATCCATTTCCTTATCCATAATTTCCTCTTATCTCAGATTTTCCATA
CCCCACCTTCTCAAAACGATACCGTTTCTCCCTCTCCAATCCCTTCTTCCACTCCCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCACAACCACATC
CGCACCTTCCTCCATGGACGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTATCCCGATCCCTTTCCCCTCTCCAATCCCCC
ATCTCAATCTCCGCCGCAACTTTACCCATTTCACCGCTTATGCGGTTCAAAGCGATCAACCCATCACGCAACAAACCCGCAAACCAGAAGACGATGAATCCTACGGCGAA
GTCGATGGCATCATCGGCAGCCGTGCTTTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCCGATTTCATCGC
TAAAGATGTTGTAGCCGAGTACGAAACTCCTTGGTGGACCGCCGCTAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATG
CGGTGGATGAAGATGGGAGAACTGCTCTTCTGTTTGTTTCTGGACTTGGGTCTGTGGAATGTGTGAGAACATTGGCGGAAGCCGGTGCGAATCTTAACCACCGTGATAAC
AGTGGTGGGTTTACGGCTTTGCATATGGCGGCTGGGTATGTGAAACCAGAGACAGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGAAGATGAGAAGGGACG
GACGGCGTTGGAGTTAGCTAAGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCGGAGCGGTGGAGAAGGTGGTTTATG
AGTATGCGGAGGTGGAGGAATTGTTGGAAAAGAGAGGGAAAGGGGAGAATTTGGAGTATTTAGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTG
ATTGCGGAGGATTTGGTGGCAGATTTTGAAGCAGGGTTGGAATATGCAGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAA
ATGGACGGATATACAAGATGCCACGTGGGAGCCTTTGGATAATGTGGATCCTGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTT
GACAAAGCCTTTTTCCCCCTCCAAGTATGTATTTAAACTAGAGATTTTTTTTTTGTAATATTGGAAAAATCTTAAAAAATAATAAAAAAAAAAAAAAAAGAGATTGATAT
ATATACTCTCTTTTGAACGTGTCCTTTTACTATTGGATTGCAGGTGGATTTGTTTGGATAATTTCGATTAAATTTTTTTTTTTTTAAAAAAAGTAAAATATTATCATTTT
GAATGAATTATTATTGAGATTTAAAGTGCAGTATCTTAACTAGTTAAAATATACTCAAATAGATGTTAAAACATTTTATTTACTAAATTA
Protein sequenceShow/hide protein sequence
MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVV
AEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE
LAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI
QDATWEPLDNVDPDLINEFEKAQAQSSNGSAL