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PI0017844 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017844
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:17084346..17084510
RNA-Seq ExpressionPI0017844
SyntenyPI0017844
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-1270.37Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF + ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.6e-1372.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF D ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]2.2e-1270.37Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF + ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-1272.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF D ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.3e-1272.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF D ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein1.1e-1270.37Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF + ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
A0A5A7UIM7 Putative nuclease HARBI13.7e-1372.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF D ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
A0A5A7VJX3 Retrotransposon protein6.3e-1372.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF D ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
A0A5D3BL48 Putative nuclease HARBI16.3e-1372.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF D ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
A0A5D3D9Z3 Retrotransposon protein1.1e-1270.37Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
        MTN DI D +DE DST+ATT  ++IHYIETSN WSQWRD+LAE MF + ELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGCTGACATACCGGACGAAGTTGATGAGGGTGACTCAACGTACGCCACTACTGGTGGGGAGGAAATTCACTACATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCAGAAAGAATGTTTTGTGATGAGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGCTGACATACCGGACGAAGTTGATGAGGGTGACTCAACGTACGCCACTACTGGTGGGGAGGAAATTCACTACATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCAGAAAGAATGTTTTGTGATGAGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNADIPDEVDEGDSTYATTGGEEIHYIETSNAWSQWRDELAERMFCDEELRNQ