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PI0017855 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017855
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr09:7363322..7364056
RNA-Seq ExpressionPI0017855
SyntenyPI0017855
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.4e-2553.57Show/hide
Query:  MNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQ-------------------------------EIERLNGVAIKFLNAL
        MNCVLATENEKLREEVK+WVQQAV+ QR LDEAKRK+ +L K+NDSL+ E IQ                               EIE+LNG+ ++F NAL
Subjt:  MNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQ-------------------------------EIERLNGVAIKFLNAL

Query:  HEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK
        HEQA SSQ+ A+ +EVLQ S+++YKSQL+E ++ NN LQK
Subjt:  HEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK

KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.9e-5462.11Show/hide
Query:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR
        +C LEDW   YES++AN KIHEAVEAW+FVKK+KSLR+C+ TT+QYDNWRA ++ I ++AMSES VP+I LKK HD  E++LKRLREMNCV+ATENEKLR
Subjt:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR

Query:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM
        EEVK+WVQQAV+ QR LDEAKRK  +L K+NDSL+ E IQ + + N   ++ +  LHE+   ++K A+E+EVLQ S+K+YKSQL+E K +
Subjt:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]1.9e-4353.57Show/hide
Query:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR
        +C LEDW   YES++AN+KIHEAVEAW+FVKK+KSLR+C+ TT+QYDNWRA ++ I ++ MSES VP+I LKK HD  E++LKRLREMNCVLATENEKLR
Subjt:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR

Query:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK
        EEVK+WVQQAV+  R LDEAKRK+                                        + A+ +EVLQ S+++YKSQL+E ++ NN LQK
Subjt:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.9e-5462.11Show/hide
Query:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR
        +C LEDW   YES++AN KIHEAVEAW+FVKK+KSLR+C+ TT+QYDNWRA ++ I ++AMSES VP+I LKK HD  E++LKRLREMNCV+ATENEKLR
Subjt:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR

Query:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM
        EEVK+WVQQAV+ QR LDEAKRK  +L K+NDSL+ E IQ + + N   ++ +  LHE+   ++K A+E+EVLQ S+K+YKSQL+E K +
Subjt:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]9.9e-3260.4Show/hide
Query:  MSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIER----LNGVA-------
        MSES VP+I LKK HD  E++LKRLREMNCVLATENEKLREEVK+WVQQAV+ QR LDEAKRK+ +L K+NDSL+ E IQ  ++    L  +A       
Subjt:  MSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIER----LNGVA-------

Query:  --IKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK
           +F NALHEQA SSQ+ A+ +EVLQ S+++YKSQL+E ++ NN LQK
Subjt:  --IKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like4.8e-3260.4Show/hide
Query:  MSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIER----LNGVA-------
        MSES VP+I LKK HD  E++LKRLREMNCVLATENEKLREEVK+WVQQAV+ QR LDEAKRK+ +L K+NDSL+ E IQ  ++    L  +A       
Subjt:  MSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIER----LNGVA-------

Query:  --IKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK
           +F NALHEQA SSQ+ A+ +EVLQ S+++YKSQL+E ++ NN LQK
Subjt:  --IKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK

A0A5A7SM49 Glial fibrillary acidic protein-like1.1e-2553.57Show/hide
Query:  MNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQ-------------------------------EIERLNGVAIKFLNAL
        MNCVLATENEKLREEVK+WVQQAV+ QR LDEAKRK+ +L K+NDSL+ E IQ                               EIE+LNG+ ++F NAL
Subjt:  MNCVLATENEKLREEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQ-------------------------------EIERLNGVAIKFLNAL

Query:  HEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK
        HEQA SSQ+ A+ +EVLQ S+++YKSQL+E ++ NN LQK
Subjt:  HEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK

A0A5A7SNY0 Glial fibrillary acidic protein-like9.0e-5562.11Show/hide
Query:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR
        +C LEDW   YES++AN KIHEAVEAW+FVKK+KSLR+C+ TT+QYDNWRA ++ I ++AMSES VP+I LKK HD  E++LKRLREMNCV+ATENEKLR
Subjt:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR

Query:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM
        EEVK+WVQQAV+ QR LDEAKRK  +L K+NDSL+ E IQ + + N   ++ +  LHE+   ++K A+E+EVLQ S+K+YKSQL+E K +
Subjt:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM

A0A5A7SUT0 Reverse transcriptase9.3e-4453.57Show/hide
Query:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR
        +C LEDW   YES++AN+KIHEAVEAW+FVKK+KSLR+C+ TT+QYDNWRA ++ I ++ MSES VP+I LKK HD  E++LKRLREMNCVLATENEKLR
Subjt:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR

Query:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK
        EEVK+WVQQAV+  R LDEAKRK+                                        + A+ +EVLQ S+++YKSQL+E ++ NN LQK
Subjt:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQK

A0A5D3D0S2 Glial fibrillary acidic protein-like9.0e-5562.11Show/hide
Query:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR
        +C LEDW   YES++AN KIHEAVEAW+FVKK+KSLR+C+ TT+QYDNWRA ++ I ++AMSES VP+I LKK HD  E++LKRLREMNCV+ATENEKLR
Subjt:  LCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLR

Query:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM
        EEVK+WVQQAV+ QR LDEAKRK  +L K+NDSL+ E IQ + + N   ++ +  LHE+   ++K A+E+EVLQ S+K+YKSQL+E K +
Subjt:  EEVKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAAATAATTCGCACCAGTTTATGTAGGCTAGAGGATTGGGGATTGCCTTATGAGTCAGACGTGGCAAATGAAAAAATTCATGAAGCTGTTGAGGCATGGCAATT
CGTAAAGAAAATAAAGAGCTTGCGAAATTGTAAGAGTACTACAAAACAGTATGATAATTGGAGAGCATTTAAAGATGTGATTAAAGTTAGTGCTATGTCAGAATCTTCAG
TTCCAAGCATAGTGTTGAAGAAAAATCATGACGATGGAGAGAGAGATTTGAAGAGGTTAAGAGAAATGAATTGTGTTTTGGCAACAGAAAACGAAAAGTTGAGAGAAGAA
GTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGATATTTGGATGAGGCAAAACGAAAGCAATCAAAGTTGGTGAAGGATAACGATTCTTTAGACATTGAGGTGAT
CCAAGAAATAGAAAGATTGAATGGGGTTGCTATAAAATTCCTAAATGCACTACATGAACAAGCCACATCATCTCAAAAGATCGCTGTAGAGGTCGAGGTTCTACAACAAT
CAGTTAAAAAATACAAGTCCCAACTTATGGAAGTGAAAAACATGAACAATTTGCTTCAAAAGAGATCACAACAGATGACTACACTCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAAAATAATTCGCACCAGTTTATGTAGGCTAGAGGATTGGGGATTGCCTTATGAGTCAGACGTGGCAAATGAAAAAATTCATGAAGCTGTTGAGGCATGGCAATT
CGTAAAGAAAATAAAGAGCTTGCGAAATTGTAAGAGTACTACAAAACAGTATGATAATTGGAGAGCATTTAAAGATGTGATTAAAGTTAGTGCTATGTCAGAATCTTCAG
TTCCAAGCATAGTGTTGAAGAAAAATCATGACGATGGAGAGAGAGATTTGAAGAGGTTAAGAGAAATGAATTGTGTTTTGGCAACAGAAAACGAAAAGTTGAGAGAAGAA
GTCAAAAGATGGGTCCAACAAGCTGTTAGTGCTCAAAGATATTTGGATGAGGCAAAACGAAAGCAATCAAAGTTGGTGAAGGATAACGATTCTTTAGACATTGAGGTGAT
CCAAGAAATAGAAAGATTGAATGGGGTTGCTATAAAATTCCTAAATGCACTACATGAACAAGCCACATCATCTCAAAAGATCGCTGTAGAGGTCGAGGTTCTACAACAAT
CAGTTAAAAAATACAAGTCCCAACTTATGGAAGTGAAAAACATGAACAATTTGCTTCAAAAGAGATCACAACAGATGACTACACTCAGTTGA
Protein sequenceShow/hide protein sequence
MVKIIRTSLCRLEDWGLPYESDVANEKIHEAVEAWQFVKKIKSLRNCKSTTKQYDNWRAFKDVIKVSAMSESSVPSIVLKKNHDDGERDLKRLREMNCVLATENEKLREE
VKRWVQQAVSAQRYLDEAKRKQSKLVKDNDSLDIEVIQEIERLNGVAIKFLNALHEQATSSQKIAVEVEVLQQSVKKYKSQLMEVKNMNNLLQKRSQQMTTLS