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PI0017898 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017898
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr08:3426964..3427364
RNA-Seq ExpressionPI0017898
SyntenyPI0017898
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]2.4e-3278.65Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MST+RS P  IVHKARTNLG++IS+QKAWRAKEH++KIL GD VESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFMAF ASI+G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

KAA0050206.1 uncharacterized protein E6C27_scaffold355G00380 [Cucumis melo var. makuwa]1.1e-3279.78Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MSTDRS PK IVHKART LGV IS+QKAWR KEHI+KIL GD VESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFMAF AS++G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

KAA0064043.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]7.1e-3278.65Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MSTD S PK IVHKARTNLGV+IS+QKAWRAKEH++KIL GD  ESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFM F ASI+G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]2.4e-3278.65Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MST+RS P  IVHKARTNLG++IS+QKAWRAKEH++KIL GD VESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFMAF ASI+G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]3.8e-3380.9Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MSTDRS PK IVHKARTNLGVSIS+QK WRAKEH++KIL GD+VESY+LI  FFDKLVE  P TCTALEMDD GHFKFCFMAF ASI G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

TrEMBL top hitse value%identityAlignment
A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 41.2e-3278.65Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MST+RS P  IVHKARTNLG++IS+QKAWRAKEH++KIL GD VESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFMAF ASI+G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

A0A5A7V7F3 Protein FAR1-RELATED SEQUENCE 43.4e-3278.65Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MSTD S PK IVHKARTNLGV+IS+QKAWRAKEH++KIL GD  ESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFM F ASI+G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

A0A5D3BGP1 MULE domain-containing protein5.3e-3379.78Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MSTDRS PK IVHKART LGV IS+QKAWR KEHI+KIL GD VESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFMAF AS++G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 41.2e-3278.65Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MST+RS P  IVHKARTNLG++IS+QKAWRAKEH++KIL GD VESY+LI  FFDKLVE  P TCTALEMDDSGHFKFCFMAF ASI+G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

A0A5D3C7L7 Uncharacterized protein1.8e-3380.9Show/hide
Query:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG
        MSTDRS PK IVHKARTNLGVSIS+QK WRAKEH++KIL GD+VESY+LI  FFDKLVE  P TCTALEMDD GHFKFCFMAF ASI G
Subjt:  MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGATCGTTCCTTTCCAAAAGCGATTGTCCATAAGGCTCGTACAAATCTTGGAGTTAGTATAAGTCATCAAAAAGCTTGGAGGGCAAAAGAACACATAATAAA
GATATTAAAAGGTGATGTCGTTGAATCGTATTCGTTGATTGCAAGCTTTTTTGATAAATTGGTTGAGTGTATCCCAGCTACATGCACTGCTTTAGAGATGGATGATAGTG
GTCATTTCAAGTTTTGCTTTATGGCTTTTGATGCATCAATTGATGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGATCGTTCCTTTCCAAAAGCGATTGTCCATAAGGCTCGTACAAATCTTGGAGTTAGTATAAGTCATCAAAAAGCTTGGAGGGCAAAAGAACACATAATAAA
GATATTAAAAGGTGATGTCGTTGAATCGTATTCGTTGATTGCAAGCTTTTTTGATAAATTGGTTGAGTGTATCCCAGCTACATGCACTGCTTTAGAGATGGATGATAGTG
GTCATTTCAAGTTTTGCTTTATGGCTTTTGATGCATCAATTGATGGGTGA
Protein sequenceShow/hide protein sequence
MSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFDASIDG