; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017900 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017900
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRNA-binding family protein
Genome locationchr02:5084622..5091793
RNA-Seq ExpressionPI0017900
SyntenyPI0017900
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139049.1 RNA-binding protein Y14 [Cucumis sativus]2.4e-10199.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_022154366.1 RNA-binding protein Y14A [Momordica charantia]4.8e-9795.94Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSL+ GPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_022961208.1 RNA-binding protein Y14-like [Cucurbita moschata]1.5e-9895.94Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSL+GGPKKTKGRGFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_022988215.1 RNA-binding protein Y14A-like [Cucurbita maxima]2.1e-9794.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAIT GASSSL+GGPKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]7.9e-10097.46Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSL+GGPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein1.2e-10199.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B1.2e-10199.49Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A6J1DNH7 RNA-binding protein Y14A2.3e-9795.94Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSL+ GPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like7.2e-9995.94Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAIT GASSSL+GGPKKTKGRGFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

A0A6J1JIZ0 RNA-binding protein Y14A-like1.0e-9794.92Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAIT GASSSL+GGPKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQIINVDWAFSHGPIRRKN RP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A1.1e-6466.83Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSG--GPKKTKGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I  G      G  G +KTKGRGFR++ + R++RLAG    SDFDSL S  GPGP RSIE
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSG--GPKKTKGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRS-
        GWI+LVTGVHEEAQEDDL N F +FG++KNLHLNLDRRTGFVKGYALIEYE+FEEA+ AI A+DG ELLTQII+VDWAFS+GP++R+N R    RRSRS 
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRS-

Query:  PRRRY
        PRRRY
Subjt:  PRRRY

F4I9J7 RNA-binding protein Y146.5e-6568.93Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI AGA+       KKTKGRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

Q28BZ1 RNA-binding protein 8A2.3e-3857.34Show/hide
Query:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +     R+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR
          ++G +L+ Q I+VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR

Q6ATR0 RNA-binding protein Y14B2.5e-4049.26Show/hide
Query:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIE
        A+ DVE VD+   E EE+D MDED           P P +           +S G  +++GR       R+T +  S+   FDSL  A  P  GPQRSIE
Subjt:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSP
        GWI+LV+GV E+A+EDDL N F +FG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI AM+G +LLT+ + VDWAFS GPI++  +     RRSR+P
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSP

Query:  RRR
         RR
Subjt:  RRR

Q6PH90 RNA-binding protein 8A-B8.1e-3957.34Show/hide
Query:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR
          ++G +L+ Q ++VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.7e-6668.93Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI AGA+       KKTKGRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGP-----IRRKNARPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

AT3G11400.1 eukaryotic translation initiation factor 3G11.2e-0829.92Show/hide
Query:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
        G SS++S  P    G G       + R AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + 
Subjt:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE

Query:  SFEEAEKAISAMDGAELLTQIINVDWA
        S E+A++AI+ ++G      I+ V+WA
Subjt:  SFEEAEKAISAMDGAELLTQIINVDWA

AT3G11400.2 eukaryotic translation initiation factor 3G11.2e-0829.92Show/hide
Query:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE
        G SS++S  P    G G       + R AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + 
Subjt:  GASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYE

Query:  SFEEAEKAISAMDGAELLTQIINVDWA
        S E+A++AI+ ++G      I+ V+WA
Subjt:  SFEEAEKAISAMDGAELLTQIINVDWA

AT5G64200.1 ortholog of human splicing factor SC351.2e-0831.62Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR

AT5G64200.2 ortholog of human splicing factor SC351.2e-0831.62Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + I V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNAR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCGCTGATGTAGAGGCTGTCGACTTTGAGCCTGAGGAAGATGACCTCATGGACGAGGATGGAGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAA
GCTCAAATCCGCCATTACCGCCGGCGCATCTTCCTCTCTTTCCGGTGGTCCTAAGAAGACTAAGGGTCGTGGATTTCGAGAGGAGTCTGATCGAAACACCCGCCTTGCTG
GGTCGGACTTCGATTCCCTCAAGTCTGCTGATGGTCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACACGAAGAGGCACAGGAGGATGAT
CTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGTCGTACTGGGTTCGTCAAGGGATATGCGTTGATTGAATACGAGAGTTTTGA
GGAAGCAGAGAAAGCAATATCTGCCATGGACGGTGCTGAACTTCTCACCCAAATTATCAATGTTGATTGGGCATTCAGCCATGGACCCATTAGAAGGAAGAACGCGAGGC
CTGCTAGAGAACGACGTTCGAGGAGCCCTAGGAGGAGATACTGA
mRNA sequenceShow/hide mRNA sequence
AGAAAAATGTAAAAAAATTGGGTTAGCGGGCAAACAAGAAACCCTTGTTTCGATCCCCAAAAACCCCACCCTTTCTCCCATCTTCTTTCTTCCTTCCTTCCATTTTCCCT
CCCCATTTTTTAAGAACCAACCAGGAGCTCTCGGCAACATTTCCTTACCCATGGCCAGCGCTGATGTAGAGGCTGTCGACTTTGAGCCTGAGGAAGATGACCTCATGGAC
GAGGATGGAGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCATTTCCTAAGCTCAAATCCGCCATTACCGCCGGCGCATCTTCCTCTCTTTCCGGTGGTCCTAAGAAGAC
TAAGGGTCGTGGATTTCGAGAGGAGTCTGATCGAAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCTGCTGATGGTCCTGGCCCCCAACGATCTATTGAAG
GATGGATCATTCTGGTAACTGGTGTACACGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTAAATCTTGATCGT
CGTACTGGGTTCGTCAAGGGATATGCGTTGATTGAATACGAGAGTTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGACGGTGCTGAACTTCTCACCCAAATTATCAA
TGTTGATTGGGCATTCAGCCATGGACCCATTAGAAGGAAGAACGCGAGGCCTGCTAGAGAACGACGTTCGAGGAGCCCTAGGAGGAGATACTGATCTTGAGATGTAGAAA
CTTGATGTGTGGTGTTTATGGATTTTAATTGGAAAGGTGTTTTCTTGTGGATTGGATTAGGAGAGATGTTTCTAATGAGCTCTTACTCAATTGTCTCAAGAATCCCCTGG
TTTCCAGCCTTTGTTTCTCGATCGTTGATGTGAATTGATGAATTGTATGTAACTTAGAGGATTTGAGGTTTATGATTTTCTTTTTTCTTTTCTTCTTTTTTTGGATTAAT
TGAGGTTTTTGCCATTTTGTGTTGAATATCTGCTATTATATATATTTTTTTGTTCT
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITAGASSSLSGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDD
LQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRKNARPARERRSRSPRRRY