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PI0017935 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017935
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr03:23235779..23235970
RNA-Seq ExpressionPI0017935
SyntenyPI0017935
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047845.1 hypothetical protein E6C27_scaffold133G001090 [Cucumis melo var. makuwa]2.3e-0860.78Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDEN
        +NN+ V   Q AQEQN  Y+AH +D+PIRSYA+ NLY+FNP I YP F EN
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDEN

KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]1.2e-1470Show/hide
Query:  NNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        NN+N P  Q  QEQN AY+AHDLD+PI+SYA+PNLY+FNPGIAY  F ENV FEIK +ML
Subjt:  NNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.0e-1262.3Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        +NN+  P  QA Q  N  Y+AH+ DRPIRS  +PNLY FNPGI YP F EN RF+IKPVML
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]7.3e-1568.85Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        +NN+ +P  QAAQ  N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VML
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]2.0e-1262.3Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        +NN+  P  QA Q  N  Y+AH+ DRPIRS  +PNLY FNPGI YP F EN RF+IKPVML
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

TrEMBL top hitse value%identityAlignment
A0A5A7U2F0 Uncharacterized protein1.1e-0860.78Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDEN
        +NN+ V   Q AQEQN  Y+AH +D+PIRSYA+ NLY+FNP I YP F EN
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDEN

A0A5A7UDN8 Uncharacterized protein6.0e-1570Show/hide
Query:  NNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        NN+N P  Q  QEQN AY+AHDLD+PI+SYA+PNLY+FNPGIAY  F ENV FEIK +ML
Subjt:  NNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.69.6e-1362.3Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        +NN+  P  QA Q  N  Y+AH+ DRPIRS  +PNLY FNPGI YP F EN RF+IKPVML
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.5e-1568.85Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        +NN+ +P  QAAQ  N  Y+A D DRPIRSYA+PNLY+FNPGIAYP F EN RFEIK VML
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.69.6e-1362.3Show/hide
Query:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML
        +NN+  P  QA Q  N  Y+AH+ DRPIRS  +PNLY FNPGI YP F EN RF+IKPVML
Subjt:  KNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAATAATAGAAATGTGCCACCTCAACAAGCTGCCCAAGAACAGAATACCGCTTACATGGCGCATGATTTAGACAGACCAATTAGGTCTTATGCTGCACCAAA
CCTTTACAACTTCAACCCAGGAATCGCTTACCCTATGTTCGACGAGAATGTAAGATTCGAGATCAAACCTGTCATGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAATAATAGAAATGTGCCACCTCAACAAGCTGCCCAAGAACAGAATACCGCTTACATGGCGCATGATTTAGACAGACCAATTAGGTCTTATGCTGCACCAAA
CCTTTACAACTTCAACCCAGGAATCGCTTACCCTATGTTCGACGAGAATGTAAGATTCGAGATCAAACCTGTCATGCTATAG
Protein sequenceShow/hide protein sequence
MEKNNRNVPPQQAAQEQNTAYMAHDLDRPIRSYAAPNLYNFNPGIAYPMFDENVRFEIKPVML