; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017955 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017955
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCleavage and polyadenylation specificity factor subunit 6
Genome locationchr01:13455534..13456984
RNA-Seq ExpressionPI0017955
SyntenyPI0017955
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034772 - CPSF6/7 family
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07956.1 cleavage and polyadenylation specificity factor subunit 6 [Cucumis melo var. makuwa]6.6e-23091.16Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKND LGFKREEEPKMEPPAPVPP+S ASIPGIGGGATEVTGL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS
        GDAGGHTV                      GG GSGPPVGGGVGIRVELGQGSK  ELEERSSNNVAGHQAPQQPQL        QPQPQPQHHHQ PQS
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS

Query:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
        GVLGNPGSVENEGLLRQGGGVNVNGVGGNGF N+GSAGGGSGGT+LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
Subjt:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA

Query:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
        CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
Subjt:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM

Query:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAP+GRMGTYGGFPGAPAP
Subjt:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

XP_031744545.1 cleavage and polyadenylation specificity factor subunit CG7185-like [Cucumis sativus]4.5e-23191.81Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS
        GDAGG TV                      GGVGSGPPVG GVGIRVELGQGSK  ELEERSSNNVAGHQAPQQ Q QPQPQPQPQPQPQPQHHHQ PQS
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS

Query:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
        GVLGNPGSVENEGLLRQGGGVNVNGVGGNGF NIGSAGGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
Subjt:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA

Query:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
        CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQV+RNQQIAQATNPQARRAPN+AVGKIGG+SIATGGNYQGGDNNRGSGRGNWGR NAHGMGGRGPAG M
Subjt:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM

Query:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        RGRGGG+GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

XP_031744552.1 cleavage and polyadenylation specificity factor subunit CG7185 [Cucumis sativus]1.4e-22788.54Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFKREEEPKMEPPAPVPPSS ASIPGIGGGATEVTGL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAP----------------QQPQLQPQPQPQ
        GDAGG TV                      GGVGSGPPVG GVGIRVELGQGSK  ELEERSSNNVAGHQAP                QQ Q QPQPQPQ
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAP----------------QQPQLQPQPQPQ

Query:  PQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKS
        PQPQPQPQHHHQ PQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGF+NIGSAGGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKS
Subjt:  PQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKS

Query:  KGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWG
        KGYCQVEFYD SAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQV+RNQQIAQATNPQARRAPN+AVGKIGG+SIATGGNYQGGDNNRGSGRGNWG
Subjt:  KGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWG

Query:  RGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        R NAHGMGGRGPAGPMRGRGGG+GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  RGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

XP_038897113.1 uncharacterized PE-PGRS family protein PE_PGRS46-like [Benincasa hispida]1.8e-21988.58Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK  EEPKMEPPAPVPPSS ASIPG+GGGATEV GL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS
        GD GGH+V                      GGVGSGPPVGGG GIRVELGQGSKT+ELEERSSNNV  HQA      Q Q Q QPQPQPQPQHHHQ PQS
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS

Query:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
        GVLGNPGSVENEGLLRQGG +NVNGVGGN F N+GSAGGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
Subjt:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA

Query:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
        CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQ+AQATNPQARR PNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
Subjt:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM

Query:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        R RGGG+GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

XP_038897335.1 cleavage and polyadenylation specificity factor subunit 6-like [Benincasa hispida]6.4e-21787.07Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDE EGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK  EEPKMEPPAP PPSS ASIPG+GGGATEV GL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS
        GD GGH+V                      GG G GPPVGGG GIRVELGQGSKTNELEERS+NN+A HQAPQ      Q QPQ Q QPQPQHHHQ PQS
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS

Query:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
        GVLGNPGSVENEGLLRQGGGVNVNGVGGNGF N+GSAGGG GGTILFVGDLHWWTTDAELE ELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
Subjt:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA

Query:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
        CKEGMNGHIFNGRPCVVAYASPFSVK+MGEAQVNRNQQ++QATNPQARR PNDAVGKIGGS+IATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
Subjt:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM

Query:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        R RGGG+GGRGIMGNGGNGFGQGIGA PPLLHPQSMM QGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

TrEMBL top hitse value%identityAlignment
A0A0A0K3G6 RRM domain-containing protein3.6e-22690.3Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRK+DDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS
        GDAGG TV                      GGVGSGPPVG GVGIRVELGQGSK  ELEERSSNNVAGHQAP        PQPQPQPQPQPQHHHQ PQS
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS

Query:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
        GVLGNPGSVENEGLLRQGGGVNVNGVGGNGF NIGSAGGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYD SAATA
Subjt:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA

Query:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
        CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQV+RNQQIAQATNPQARRAPN+AVGKIGG+SIATGGNYQGGDNNRGSGRGNWGR NAHGMGGRGPAG M
Subjt:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM

Query:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        RGRGGG+GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

A0A5D3CC60 Cleavage and polyadenylation specificity factor subunit 63.2e-23091.16Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKND LGFKREEEPKMEPPAPVPP+S ASIPGIGGGATEVTGL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS
        GDAGGHTV                      GG GSGPPVGGGVGIRVELGQGSK  ELEERSSNNVAGHQAPQQPQL        QPQPQPQHHHQ PQS
Subjt:  GDAGGHTVRR-------------------EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQS

Query:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
        GVLGNPGSVENEGLLRQGGGVNVNGVGGNGF N+GSAGGGSGGT+LFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA
Subjt:  GVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATA

Query:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
        CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM
Subjt:  CKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPM

Query:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAP+GRMGTYGGFPGAPAP
Subjt:  RGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

A0A6J1CCR1 cleavage and polyadenylation specificity factor subunit 61.5e-21185.81Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEE-PKMEPPAPVPPSSAASIPGIGGGATEVTG
        MDEGEGGFGEGVDQIDQFHRNEAISAVAD+GFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGF+ EEE PK+EPPA + PSS ASIPG+GGGATEV  
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEE-PKMEPPAPVPPSSAASIPGIGGGATEVTG

Query:  LGDAGGHTV-------------------RREGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQ
        LGD GGH+V                      GG GSGPP+GGG GIRVELGQGSKTNELEERSSNNVA HQAPQQP  QPQPQ Q Q Q   QHHHQ   
Subjt:  LGDAGGHTV-------------------RREGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQ

Query:  SGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAAT
        SGVLGNPGSVEN+GLLRQ GGVNVNGVGGNG+ N+GSAGGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEFYDPSAAT
Subjt:  SGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAAT

Query:  ACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGP
        ACKEGMNGH+FNGRPCVVA+ASPFSVKKMGEAQVNRNQQIAQA NPQARR PNDAVGKIGGS+I TGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGP
Subjt:  ACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGP

Query:  MRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        MR RGGG+GGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  MRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

A0A6J1F726 cleavage and polyadenylation specificity factor subunit CG7185-like2.1e-21385.23Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK EEEPKMEPPA VPP+S ASIPG GGG T+V GL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR---EG----------------GVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAP--QQP----QLQPQPQPQPQPQPQPQHH
        GD GGH+V     EG                G GSGPP+GGG GIRVELGQGSKTNELEERSSNNVA HQAP  QQP    QLQP  QPQPQPQ Q QHH
Subjt:  GDAGGHTVRR---EG----------------GVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAP--QQP----QLQPQPQPQPQPQPQPQHH

Query:  HQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSA----GGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQV
        HQ  Q GVLGNP SVENEGLLRQGGGVNVNGVGGNGF N+G+A    GGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQV
Subjt:  HQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSA----GGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQV

Query:  EFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHG
        EFYDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQ+AQATNPQARR PND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHG
Subjt:  EFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHG

Query:  MGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        MGGRGPAGPMR RGGG+GGRGIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  MGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

A0A6J1ILS2 cleavage and polyadenylation specificity factor subunit 6-like9.3e-21485.38Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL
        MDEGEGG G G DQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFK EEEPKMEPPA VPP+S ASIPG GGG T+V GL
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGL

Query:  GDAGGHTVRR---EG----------------GVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQP----QPQPQPQPQPQPQHHHQ
        GD GGH+V     EG                G GSGPP+GGG GIRVELGQGSKTNELEERSSNNVA HQAPQQ Q QP    QP  QPQPQ Q QHHHQ
Subjt:  GDAGGHTVRR---EG----------------GVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQP----QPQPQPQPQPQPQHHHQ

Query:  LPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSA----GGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEF
          Q GVLGNP SVENEGLLRQGGGVNVNGVGGNGF N+GSA    GGG GGTILFVGDLHWWTTDAELEVELCKYGPLKEVKF+DEKASGKSKGYCQVEF
Subjt:  LPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSA----GGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEF

Query:  YDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMG
        YDPSAATACKEGMNGH+FNGRPCVVAYASPFSVK+MGEAQVNRNQQ+AQATNPQARR PND VGK+GGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMG
Subjt:  YDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMG

Query:  GRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        GRGPAGPMR RGGG+GGRGIMGNGGNGFGQG+GATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
Subjt:  GRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A3.1e-0431.49Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T D  LE    +YG + + K  +++ +G+S+G+  V F D  +     EGMNG   +GR   V  A                         Q
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGAT
        +R +     G+ GG     GG   GG    G G G +G G   G G  G  G    RGGG GG G  G    G G G G +
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGAT

P49311 Glycine-rich RNA-binding protein GRP2A2.8e-0532.4Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T +  LE    ++G L + K  +++ +G+S+G+  V F D  +     EGMNG   +GR   V  A                         Q
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIG
        +R +     G+ GG     GG Y GG    G GR   G G + G GG    G   G GGG GG G    GG G G+G G
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIG

Q03878 Glycine-rich RNA-binding protein3.1e-0432.97Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T D  LE    ++G + + K  +++ +G+S+G+  V F D  +     EGMNG   +GR   V            EAQ              
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGR---GNAHGMGGR--GPAGPMRGRGGGIGGRGIMGNGGNGFGQG
               + G  GG     GG  +GG    G G G  GR   G   G GGR  G  G   G GGG GGR   G+GG G G G
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGR---GNAHGMGGR--GPAGPMRGRGGGIGGRGIMGNGGNGFGQG

Q05966 Glycine-rich RNA-binding protein 102.8e-0531.67Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T DAELE    ++G + + K  +++ +G+S+G+  V F D  +     + MNG   +GR   V                             
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGG-GIGGRGIMGNGGNGFGQGIG
             N+A  + GG     GG   GG    G G G  G G+  G GG G  G  RG GG G GG G  G GG   G G G
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGG-GIGGRGIMGNGGNGFGQGIG

Q43472 Glycine-rich RNA-binding protein blt8011.8e-0430.39Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T D  L+    KYG + + K   ++ +G+S+G+  V F    A     E MNG   +GR   V            EAQ  R+          
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGAT
                    GG     GG   GG    G G G  G G  +G G  G  G    R GG GG    G GG G+G   G +
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGAT

Arabidopsis top hitse value%identityAlignment
AT1G13190.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-4739.1Show/hide
Query:  ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGHTV----RREGGVG--SG
        I A+AD+  +G D+DEY+DLY+DVNVGE F           F+   +P  +PPA V  S+ AS+            +G   G TV    R +GG    SG
Subjt:  ISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGHTV----RREGGVG--SG

Query:  PPVG----------GGVGIRVELGQGSKTNELEERSSNNVA--GHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVN
        P             G  G+ +++    ++N++ ++ S  V    H         P+          PQ   Q+P S +  NP  + N+            
Subjt:  PPVG----------GGVGIRVELGQGSKTNELEERSSNNVA--GHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVN

Query:  GVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFS
               S   S    +G T+LFVG+LHWWTTDAE+E  L +YG +KE+KF+DE+ SGKSKGYCQVEFYD +AA ACKEGMNG IFNG+ CVVA+ASP +
Subjt:  GVGGNGFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFS

Query:  VKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPA--GPMRGRGGGIGGRGIMGNGGNGFGQ
        +K+MG     RNQ   Q  N   RR  N+ +G+  G++     N Q GD  R  GRG + RG   GMG RG A  G MRGRG         G+G   +G 
Subjt:  VKKMGEAQVNRNQQIAQATNPQARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPA--GPMRGRGGGIGGRGIMGNGGNGFGQ

Query:  GIG--ATPPLLHPQSMMGQ-GFDPSFGAPMGRMGTYGGFPGAPAP
        G+   A   ++HPQ MMG  GFDP+F   MGR   YGG+ G   P
Subjt:  GIG--ATPPLLHPQSMMGQ-GFDPSFGAPMGRMGTYGGFPGAPAP

AT2G21660.1 cold, circadian rhythm, and rna binding 22.2e-0530.94Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T D  LE    +YG + + K  +++ +G+S+G+  V F D  A     EGMNG   +GR                   VN  Q         
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRG----NAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQG
         R          GG   + GG   GG   R  G G +  G    ++ G GG    G  R  GGG GG    G GG+G G G
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRG----NAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQG

AT2G21660.2 cold, circadian rhythm, and rna binding 24.4e-0632.78Show/hide
Query:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ
        FVG L W T D  LE    +YG + + K  +++ +G+S+G+  V F D  A     EGMNG   +GR   V            EAQ              
Subjt:  FVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQ

Query:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRG---NAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQG
               + G  GG     GG+Y GG   R  G G  G G   ++ G GG    G  R  GGG GG    G GG+G G G
Subjt:  ARRAPNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRG---NAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQG

AT5G55670.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.9e-10852.63Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPK--MEPPAPVPP-----SSAASIPGIGG
        MDEG+G      DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G + EE+ K  ME    V P       + SIPG+ G
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPK--MEPPAPVPP-----SSAASIPGIGG

Query:  GATEVTGLGDAGGHTVRREGGVGSGPPV---------------------------GGGVGIRVELGQGS-KTNELEERSSNNVAGHQAPQQPQLQPQPQP
         + E     ++GG      GG GSG  V                           G G G+RVELGQ S + N+LE    NN++    P  P L      
Subjt:  GATEVTGLGDAGGHTVRREGGVGSGPPV---------------------------GGGVGIRVELGQGS-KTNELEERSSNNVAGHQAPQQPQLQPQPQP

Query:  QPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGN----GFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEK
                  +++     V+GN       G +  G G N+ G G N    G    G+ GGG GG  LFVGDLHWWTTDAELE ELCKYG +KEVKF+DEK
Subjt:  QPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGN----GFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEK

Query:  ASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRA--------PNDAVGKIGGSSIATGGNYQG
        ASGKSKGYCQVEFYDP AA+ACK+ +NG+ FNGRPCVV YASP+SVK+MGEAQVNR QQ AQ+   QA+R         P  A      ++ A GGN+QG
Subjt:  ASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRA--------PNDAVGKIGGSSIATGGNYQG

Query:  GDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP
        G+ NRG GRGNWGRGNA GMGGRGP GPMR R  G+GGRG+MGNG  GFGQG+G  PP+ +  Q MMGQGF+ +FG PM RMG YGGFPGAP P
Subjt:  GDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPL-LHPQSMMGQGFDPSFGAPMGRMGTYGGFPGAPAP

AT5G55670.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.9e-8750.45Show/hide
Query:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPK--MEPPAPVPP-----SSAASIPGIGG
        MDEG+G      DQ+DQFH+NEAISAVADDGF+ E+E D+YEDLYNDVNVGEGFLQS++KND+ G + EE+ K  ME    V P       + SIPG+ G
Subjt:  MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDE-DEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPK--MEPPAPVPP-----SSAASIPGIGG

Query:  GATEVTGLGDAGGHTVRREGGVGSGPPV---------------------------GGGVGIRVELGQGS-KTNELEERSSNNVAGHQAPQQPQLQPQPQP
         + E     ++GG      GG GSG  V                           G G G+RVELGQ S + N+LE    NN++    P  P L      
Subjt:  GATEVTGLGDAGGHTVRREGGVGSGPPV---------------------------GGGVGIRVELGQGS-KTNELEERSSNNVAGHQAPQQPQLQPQPQP

Query:  QPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGN----GFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEK
                  +++     V+GN       G +  G G N+ G G N    G    G+ GGG GG  LFVGDLHWWTTDAELE ELCKYG +KEVKF+DEK
Subjt:  QPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGN----GFSNIGSAGGGSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEK

Query:  ASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRA--------PNDAVGKIGGSSIATGGNYQG
        ASGKSKGYCQVEFYDP AA+ACK+ +NG+ FNGRPCVV YASP+SVK+MGEAQVNR QQ AQ+   QA+R         P  A      ++ A GGN+QG
Subjt:  ASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARRA--------PNDAVGKIGGSSIATGGNYQG

Query:  GDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGG
        G+ NRG GRGNWGRGNA GMGGRGP GPMR R  G+GGR    + G
Subjt:  GDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAGGAGAGGGTGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCCATTTCAGCCGTTGCTGATGATGGTTTCTTGGGTGAAGATGA
AGATGAATACGAGGACCTCTATAACGATGTTAATGTTGGGGAGGGGTTCCTTCAGTCGTTGAGGAAGAACGATGATTTGGGATTCAAGAGGGAGGAGGAACCCAAGATGG
AGCCTCCTGCACCTGTACCACCCAGTTCCGCTGCTTCCATACCTGGTATTGGTGGAGGTGCGACTGAAGTTACTGGTTTAGGAGATGCCGGTGGGCATACTGTTCGGAGA
GAAGGTGGGGTGGGATCGGGGCCGCCTGTAGGCGGCGGAGTTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAACGT
AGCTGGGCATCAGGCTCCGCAACAGCCACAGCTGCAGCCGCAGCCGCAGCCGCAGCCACAGCCGCAGCCACAGCCGCAGCACCATCACCAACTACCTCAGAGCGGAGTCT
TAGGAAATCCTGGGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGAGTTAATGTCAATGGGGTTGGTGGAAATGGGTTCAGTAATATCGGGAGTGCAGGGGGA
GGTAGCGGTGGAACAATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTCAAGTTTTA
TGACGAGAAAGCCAGTGGAAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACAGCTTGCAAGGAGGGAATGAATGGGCATATTTTTAATGGAC
GGCCATGTGTAGTTGCATATGCATCACCGTTTAGTGTTAAGAAGATGGGAGAAGCCCAAGTTAACAGGAACCAACAGATAGCCCAAGCTACTAATCCTCAAGCAAGGAGA
GCTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAGCATTGCAACGGGTGGTAACTATCAAGGTGGTGATAACAATAGAGGTTCTGGGAGAGGTAATTGGGGAAGGGG
TAATGCTCATGGAATGGGAGGTCGAGGACCAGCTGGCCCAATGAGGGGTAGGGGTGGTGGGATTGGTGGCAGAGGTATAATGGGAAATGGTGGAAATGGATTTGGCCAAG
GAATTGGTGCTACCCCTCCTTTATTGCATCCACAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCT
GGAGCTCCAGCTCCCCTTTCTCTGGAATTTTGTCATCCTTTCCTCCTGTCGGGGGTGTTGGCCTTCCTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAGGAGAGGGTGGGTTCGGTGAGGGTGTGGATCAGATTGATCAGTTTCATCGGAACGAGGCCATTTCAGCCGTTGCTGATGATGGTTTCTTGGGTGAAGATGA
AGATGAATACGAGGACCTCTATAACGATGTTAATGTTGGGGAGGGGTTCCTTCAGTCGTTGAGGAAGAACGATGATTTGGGATTCAAGAGGGAGGAGGAACCCAAGATGG
AGCCTCCTGCACCTGTACCACCCAGTTCCGCTGCTTCCATACCTGGTATTGGTGGAGGTGCGACTGAAGTTACTGGTTTAGGAGATGCCGGTGGGCATACTGTTCGGAGA
GAAGGTGGGGTGGGATCGGGGCCGCCTGTAGGCGGCGGAGTTGGGATTAGGGTTGAATTAGGGCAAGGGAGTAAAACCAATGAGTTGGAGGAGCGAAGTAGTAATAACGT
AGCTGGGCATCAGGCTCCGCAACAGCCACAGCTGCAGCCGCAGCCGCAGCCGCAGCCACAGCCGCAGCCACAGCCGCAGCACCATCACCAACTACCTCAGAGCGGAGTCT
TAGGAAATCCTGGGAGTGTAGAAAATGAAGGTTTGCTAAGGCAAGGTGGTGGAGTTAATGTCAATGGGGTTGGTGGAAATGGGTTCAGTAATATCGGGAGTGCAGGGGGA
GGTAGCGGTGGAACAATTTTGTTTGTTGGTGATTTACATTGGTGGACTACAGATGCGGAGCTGGAGGTGGAACTCTGTAAGTATGGTCCGTTGAAGGAGGTCAAGTTTTA
TGACGAGAAAGCCAGTGGAAAATCAAAAGGCTACTGCCAGGTTGAGTTTTATGATCCTTCTGCTGCCACAGCTTGCAAGGAGGGAATGAATGGGCATATTTTTAATGGAC
GGCCATGTGTAGTTGCATATGCATCACCGTTTAGTGTTAAGAAGATGGGAGAAGCCCAAGTTAACAGGAACCAACAGATAGCCCAAGCTACTAATCCTCAAGCAAGGAGA
GCTCCTAATGATGCTGTAGGTAAAATTGGTGGAAGTAGCATTGCAACGGGTGGTAACTATCAAGGTGGTGATAACAATAGAGGTTCTGGGAGAGGTAATTGGGGAAGGGG
TAATGCTCATGGAATGGGAGGTCGAGGACCAGCTGGCCCAATGAGGGGTAGGGGTGGTGGGATTGGTGGCAGAGGTATAATGGGAAATGGTGGAAATGGATTTGGCCAAG
GAATTGGTGCTACCCCTCCTTTATTGCATCCACAGTCAATGATGGGTCAAGGTTTTGATCCATCTTTTGGTGCACCCATGGGAAGAATGGGCACATATGGTGGTTTTCCT
GGAGCTCCAGCTCCCCTTTCTCTGGAATTTTGTCATCCTTTCCTCCTGTCGGGGGTGTTGGCCTTCCTGGTGTAG
Protein sequenceShow/hide protein sequence
MDEGEGGFGEGVDQIDQFHRNEAISAVADDGFLGEDEDEYEDLYNDVNVGEGFLQSLRKNDDLGFKREEEPKMEPPAPVPPSSAASIPGIGGGATEVTGLGDAGGHTVRR
EGGVGSGPPVGGGVGIRVELGQGSKTNELEERSSNNVAGHQAPQQPQLQPQPQPQPQPQPQPQHHHQLPQSGVLGNPGSVENEGLLRQGGGVNVNGVGGNGFSNIGSAGG
GSGGTILFVGDLHWWTTDAELEVELCKYGPLKEVKFYDEKASGKSKGYCQVEFYDPSAATACKEGMNGHIFNGRPCVVAYASPFSVKKMGEAQVNRNQQIAQATNPQARR
APNDAVGKIGGSSIATGGNYQGGDNNRGSGRGNWGRGNAHGMGGRGPAGPMRGRGGGIGGRGIMGNGGNGFGQGIGATPPLLHPQSMMGQGFDPSFGAPMGRMGTYGGFP
GAPAPLSLEFCHPFLLSGVLAFLV