CuGenDBv2

Gene ID	PI0017956
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein YIP
Genome location	chr04:5097008..5097568
RNA-Seq Expression	PI0017956
Synteny	PI0017956
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0048193 - Golgi vesicle transport (biological process) GO:0005770 - late endosome (cellular component) GO:0016020 - membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596564.1 Protein YIPF5, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-42

60.11

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++   S   G  P GANFEDEEPLLDELGIHPDQIW+KT    NP  +R D   D             G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAG++RFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

KGN59279.2 hypothetical protein Csa_001750 [Cucumis sativus]

1.5e-42

59.56

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++       G  P GANFEDEEPLLDELGIHPDQIW+KT    NP R    + +              G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAGLVRFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

XP_004153735.2 protein YIPF5 homolog [Cucumis sativus]

1.5e-42

59.56

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++       G  P GANFEDEEPLLDELGIHPDQIW+KT    NP R    + +              G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAGLVRFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

XP_022927148.1 protein YIPF5 homolog [Cucurbita moschata]

1.5e-42

60.11

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++   S   G  P GANFEDEEPLLDELGIHPDQIW+KT    NP  +R D   D             G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAG++RFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

XP_023538914.1 protein YIPF5 homolog [Cucurbita pepo subsp. pepo]

2.5e-42

60.11

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++   S   G  P GANFEDEEPLLDELGIHPDQIW+KT    NP  +R D   D             G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAG++RFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM5 Protein YIP

7.2e-43

59.56

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++       G  P GANFEDEEPLLDELGIHPDQIW+KT    NP R    + +              G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAGLVRFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

A0A1S3B7C5 Protein YIP

1.6e-42

59.02

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++       G  P GANFEDEEPLLDELGIHPDQIW+KT    NP R    + +              G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAGL+RFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

A0A6J1CU38 Protein YIP

1.6e-42

59.02

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Query:  MSFDIGSAAAASHPLA-VSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----
        MSFDIGSAAAAS   A +       G  P GANFEDEEPLLDELGIHPDQIW+KT    NP R    + +              G F L    +Q+    
Subjt:  MSFDIGSAAAASHPLA-VSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDR--------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQ G+VRFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

A0A6J1EK74 Protein YIP

7.2e-43

60.11

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++   S   G  P GANFEDEEPLLDELGIHPDQIW+KT    NP  +R D   D             G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAG++RFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

A0A6J1KY67 Protein YIP

1.4e-41

59.56

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Query:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----
        MSFDIGSAAAAS    ++   S   G  P GANFE EEPLLDELGIHPDQIW+KT    NP  +R D   D             G F L    +Q+    
Subjt:  MSFDIGSAAAASHPL-AVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NP--IRCDTGMDR------------GFFHLSVCCVQY----

Query:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG
                        +AGRNGNLNLHTCTSVVGYCMLPVVVLSAV+LFLPQAG++RFAVAGVF+LWATRICTSLMVSLADGG
Subjt:  ----------------VAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVSLADGG

SwissProt top hits

e value

%identity

Alignment

Q5E9E8 Protein YIPF5

3.1e-06

29.25

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Query:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S
        G NFEDE PLL+ELGI+ D IW+KT    +P++   G       L+   V C+ + A                      G    LNL + T        S
Subjt:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S

Query:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS
        V+GYC+LP+++LS+ A+     G+V   +    + W +   + + +S
Subjt:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS

Q5R6W5 Protein YIPF5

3.1e-06

29.25

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Query:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S
        G NFEDE PLL+ELGI+ D IW+KT    +P++   G       L+   V C+ + A                      G    LNL + T        S
Subjt:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S

Query:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS
        V+GYC+LP+++LS+ A+     G+V   +    + W +   + + +S
Subjt:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS

Q66KA5 Protein YIPF5

1.8e-06

27.89

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Query:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S
        G+ F+DE PLL+ELGI+ D IW+KT    +P++   G       L+   V C+ + A                      G    LNL + T        S
Subjt:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S

Query:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS
        V+GYC+LP+++LS+ A+     G++   +A + + W +   + + +S
Subjt:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS

Q7SXS2 Protein YIPF5

1.8e-06

27.89

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Query:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S
        G+ F+DE PLL+ELGI+ D IW+KT    +P++   G       L+   V C+ + A                      G    LNL + T        S
Subjt:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S

Query:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS
        V+GYC+LP+++LS  A+     G++   +A + + W +   + + +S
Subjt:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS

Q969M3 Protein YIPF5

3.1e-06

29.25

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Query:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S
        G NFEDE PLL+ELGI+ D IW+KT    +P++   G       L+   V C+ + A                      G    LNL + T        S
Subjt:  GANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRGFFHLS---VCCVQYVA----------------------GRNGNLNLHTCT--------S

Query:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS
        V+GYC+LP+++LS+ A+     G+V   +    + W +   + + +S
Subjt:  VVGYCMLPVVVLSAVALFLPQAGLVRFAVAGVFLLWATRICTSLMVS

Arabidopsis top hits

e value

%identity

Alignment

AT2G36300.1 Integral membrane Yip1 family protein

1.2e-37

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Query:  MSFDIGSAAAASHPLA-------VSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRG-------FFHLSVCCVQ------
        MSFDIGSAAA+S   A        S  S+  G     A+FEDEEPLLDELGIHPDQIW+KT    NP R +  + +        F +L++C  Q      
Subjt:  MSFDIGSAAAASHPLA-------VSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRG-------FFHLSVCCVQ------

Query:  ---------------------YVAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQ-AGLVRFAVAGVFLLWATRICTSLMVSLADGG
                              +AGRNGNLNLHTCTS+VGYC+LPVVVLSAV+LF+PQ AG VRF +A +F+LW+TR C++L+VSLADGG
Subjt:  ---------------------YVAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQ-AGLVRFAVAGVFLLWATRICTSLMVSLADGG

AT3G52760.1 Integral membrane Yip1 family protein

7.9e-34

47.31

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Query:  FDIGSAAAAS-----HPLAVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRG-------FFHLSVCCVQ----------
        F+IGSAA +           S  S+  GV    A+FEDEEPLLDELGIHPDQIW+KT    NP R +  + +        F +L++C  Q          
Subjt:  FDIGSAAAAS-----HPLAVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKT----NPIRCDTGMDRG-------FFHLSVCCVQ----------

Query:  -----------------YVAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQ-AGLVRFAVAGVFLLWATRICTSLMVSLADGG
                          +AGRNGNLNLHTCTS+VGY +LPVV+LSAV+LF+PQ AG VRF +   F+LWATR C++L+VSLADGG
Subjt:  -----------------YVAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALFLPQ-AGLVRFAVAGVFLLWATRICTSLMVSLADGG

Sequences

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CDS sequence

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ATGTCCTTTGACATCGGATCCGCCGCTGCTGCTTCACATCCTCTGGCAGTATCTATGTGGTCCTATCGGTGGGGGGTCTATCCCCGTGGTGCTAATTTCGAAGACGAAGA
ACCCCTCCTCGATGAACTCGGGATCCACCCGGATCAAATCTGGAGAAAAACCAATCCAATTCGGTGTGATACTGGGATGGATCGTGGTTTCTTCCATCTTTCTGTATGTT
GTGTTCAATATGTTGCCGGGCGGAATGGTAATTTGAATCTTCACACGTGTACTAGCGTGGTTGGGTACTGTATGTTGCCTGTCGTTGTTTTGTCGGCTGTGGCTTTGTTC
CTGCCGCAAGCCGGTCTAGTGAGATTTGCAGTTGCTGGAGTTTTTTTGTTGTGGGCGACGAGGATCTGTACGAGTCTTATGGTTTCTCTTGCTGATGGTGGGATGAGCAC
CGTGGCTTGA

mRNA sequence

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Protein sequence

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MSFDIGSAAAASHPLAVSMWSYRWGVYPRGANFEDEEPLLDELGIHPDQIWRKTNPIRCDTGMDRGFFHLSVCCVQYVAGRNGNLNLHTCTSVVGYCMLPVVVLSAVALF
LPQAGLVRFAVAGVFLLWATRICTSLMVSLADGGMSTVA

PI0017956 (gene) of Melon (PI 482460) v1 genome