; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0017977 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0017977
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionribosome production factor 1-like
Genome locationchr04:8990197..8993711
RNA-Seq ExpressionPI0017977
SyntenyPI0017977
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]1.8e-5755.82Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK+QKKLEK KRAKARDAAEK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K  ILPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        STIGPAFISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
        GHQ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++ ++++ KK    K  SKDTK
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]8.1e-5553.77Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK QKKLEK KRAKARDA+EK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K   LPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        S+IGP+FISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
         H+ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++  +++ KK    K+NSKD K
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]3.7e-5554.11Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK QKKLEK KRAKARDA+EK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K   LPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        STIGP+FISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
         H+ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++  +++ KK    K+NSKD K
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]6.4e-6069.23Show/hide
Query:  IKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFNS
        IKNKEKR EVHANLK+QKKLEK KRAKARDAAEK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K  ILPK+LITTCRFNS
Subjt:  IKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFNS

Query:  TIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPTG
        TIGPAFISELLSVIPNAHYYKRG NDLKKI+EYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPTG
Subjt:  TIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPTG

Query:  HQQELVLT
        HQ ELVLT
Subjt:  HQQELVLT

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]3.0e-5755.48Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLKNQKKLEK KRAKARDAAEK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K  ILPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        STIGP FISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
         HQ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++ ++++ KK    K  SKDTK
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein3.1e-6069.23Show/hide
Query:  IKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFNS
        IKNKEKR EVHANLK+QKKLEK KRAKARDAAEK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K  ILPK+LITTCRFNS
Subjt:  IKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFNS

Query:  TIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPTG
        TIGPAFISELLSVIPNAHYYKRG NDLKKI+EYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPTG
Subjt:  TIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPTG

Query:  HQQELVLT
        HQ ELVLT
Subjt:  HQQELVLT

A0A1S3B854 ribosome production factor 1 isoform X18.5e-5855.82Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK+QKKLEK KRAKARDAAEK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K  ILPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        STIGPAFISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
        GHQ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++ ++++ KK    K  SKDTK
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

A0A5A7UHC7 Ribosome production factor 1 isoform X18.5e-5855.82Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK+QKKLEK KRAKARDAAEK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K  ILPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        STIGPAFISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
        GHQ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++ ++++ KK    K  SKDTK
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

A0A6J1DPH5 ribosome production factor 1-like1.8e-5554.11Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK QKKLEK KRAKARDA+EK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K   LPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        STIGP+FISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
         H+ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++  +++ KK    K+NSKD K
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

A0A6J1DT48 ribosome production factor 1-like3.9e-5553.77Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN
        MIKNKEKR EVHANLK QKKLEK KRAKARDA+EK+A+ELGEE     IPRTIENTRE+        D  L   +      SI K   LPKVLITTCRFN
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTRELTRLFA---DLVLLLNS-----HSIKKCRILPKVLITTCRFN

Query:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
        S+IGP+FISELLSVIPNAHYYKRG NDLKKIIEYANA+DFTSLMVVHTSRRK             LDGL+ IGLPEGPTA FKISN        +HGNPT
Subjt:  STIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK
         H+ ELVLT             ++ G R  R  + + P     + +R        NQ+     +    H ++  +++ KK    K+NSKD K
Subjt:  GHQQELVLTQLHNTPWSSFWKESKWGRR--RRTRGIIPSMIKNKEKRAEVHANLKNQKKLEKCKRAKAHTFL-KARKRKKRPSQKNNSKDTK

SwissProt top hitse value%identityAlignment
O13823 U3 small nucleolar ribonucleoprotein protein imp42.1e-0526.97Show/hide
Query:  KEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEEIPRTIENTRELTRLF---------ADLVLLLNSHSIKKCRILPKVLITTCRFNSTIGPAFI
        +E+R  ++   K  ++L++ K  + R A  +KA+E  +E+ + ++   +L + +          +    L+    +     PKVL+TT R  S+    F 
Subjt:  KEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEEIPRTIENTRELTRLF---------ADLVLLLNSHSIKKCRILPKVLITTCRFNSTIGPAFI

Query:  SELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN
         E+  +IPN++   RGN  +  ++E A A D T ++++H  R              I DGLV   LP GPT  F + N
Subjt:  SELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN

O14180 Brix domain-containing protein C4F8.044.4e-1131.9Show/hide
Query:  IKNKEKRTEVHANLKNQKKLEKCKRAKAR-----DAAEKKAVELGEEIPRTIENTREL----------TRLFADLVLLLNSHSIKKCRILPKVLITTCRF
        IKNK  R + +    +QK  +K +R K R        EKK + L E IP TIE+ R              L A+L     S    + R +PK+L+TT + 
Subjt:  IKNKEKRTEVHANLKNQKKLEKCKRAKAR-----DAAEKKAVELGEEIPRTIENTREL----------TRLFADLVLLLNSHSIKKCRILPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKR-GNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGN
         S     F SELL   PNA + KR G+ ++ +I E A    +T L+V++  R+K ++             L  + LP GP+  F +SN        +HG 
Subjt:  NSTIGPAFISELLSVIPNAHYYKR-GNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGN

Query:  PTGHQQELVL
         TGH  EL++
Subjt:  PTGHQQELVL

P38805 Ribosome production factor 18.8e-1231.73Show/hide
Query:  IKNKEKRTEVHANLKNQKKLE----KCKRAK-ARDAAEKKAVELGEEIPRTIENTR--------ELTRLFADLVLLLNSHSIKKCRILPKVLITTCRFNS
        I NK KR E+ A++K++K  E    + KRAK  R+  E +   L E + +TIENTR        E+     DL+   NS+S +     PK+ +TT     
Subjt:  IKNKEKRTEVHANLKNQKKLE----KCKRAK-ARDAAEKKAVELGEEIPRTIENTR--------ELTRLFADLVLLLNSHSIKKCRILPKVLITTCRFNS

Query:  TIGPAFISELLSVIPNAHYYKRG-NNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT
             F + L+ ++PN  + KR     LK+I +     +FT +++++  ++K             + GL  I LPEGPT  FK+S+         HG PT
Subjt:  TIGPAFISELLSVIPNAHYYKRG-NNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNPT

Query:  GHQQELVL
         H  EL+L
Subjt:  GHQQELVL

Q8AVP1 Ribosome production factor 12.7e-1334.3Show/hide
Query:  IKNKEKRTEVHANLKNQKKLEKC----KRAKARDAAEKKAVELGEEIPRTIENTR---ELTRLFADLVLLLNSHSIK-----KCRILPKVLITTCRFNST
        IKNK++R  +   LK +K+ EK     KR K R+A   KA    + +P+TIEN R   E T   AD  + L+  + +       +  PK+LITT      
Subjt:  IKNKEKRTEVHANLKNQKKLEKC----KRAKARDAAEKKAVELGEEIPRTIENTR---ELTRLFADLVLLLNSHSIK-----KCRILPKVLITTCRFNST

Query:  IGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN---------SHGNPTG
            F  +L S+IPN+  Y R    LKKII    + D+T L+V++  R+             + +GLV   LP+GPTA FKISN             PT 
Subjt:  IGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN---------SHGNPTG

Query:  HQQELVL
        H+ E++L
Subjt:  HQQELVL

Q9VKB4 Probable ribosome production factor 14.5e-0830.43Show/hide
Query:  IKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEEIPRTIENTRELTRL-FADLVLLLNSHSIKKCRI-----------LPKVLITTCRFNST
        ++NKE+R  ++  +K +K  +K +  +AR  A   A         TIE+ RE  +   A+L    N    K+ ++            PKVLIT      T
Subjt:  IKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEEIPRTIENTRELTRL-FADLVLLLNSHSIKKCRI-----------LPKVLITTCRFNST

Query:  IGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN---------SHGNPTG
            F  EL  + PNA    R  + +KKI + A  E+FT +++V+  RRK              +GL+ I LP GPTA FK+SN          H   T 
Subjt:  IGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN---------SHGNPTG

Query:  HQQELVL
        H+ E++L
Subjt:  HQQELVL

Arabidopsis top hitse value%identityAlignment
AT4G01560.1 Ribosomal RNA processing Brix domain protein1.4e-4955.98Show/hide
Query:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTREL---------TRLFADLVLLLNSHSIKKCRILPKVLITTCRF
        MIKNK+KR++V+A  K++KKLEK K+ +ARDAAEK+A+ELGEE     IP+TIENTRE            LFAD +     + + +  I PKVL+TTCRF
Subjt:  MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEE-----IPRTIENTREL---------TRLFADLVLLLNSHSIKKCRILPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNP
        NST GPA ISELLSVIPN+HY KRG  DLKKI+EYA  +DFTSL+VVHT+RR+ D+             L+ IGLP GPTA FK+SN        +HGNP
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISN--------SHGNP

Query:  TGHQQELVL
        T HQ ELVL
Subjt:  TGHQQELVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAGAACAAAGAAAAGAGGACAGAAGTGCATGCGAACCTCAAGAACCAGAAGAAGCTTGAGAAATGCAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGAAAGC
TGTTGAACTTGGAGAAGAAATTCCTCGCACCATTGAGAACACCAGGGAACTGACGAGACTGTTTGCAGACCTGGTTCTTCTTTTGAACTCTCATTCCATCAAAAAGTGCC
GCATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACGATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGA
GGAAATAACGATTTGAAGAAGATTATAGAATATGCAAATGCCGAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAGTTGGATTCTTTTCTCGATCTAAT
GCAATGTTTTGAAATTCTAGATGGACTTGTAACTATTGGCTTACCTGAGGGACCTACTGCCGATTTCAAGATTTCGAATAGTCATGGAAATCCAACCGGTCATCAGCAAG
AACTTGTATTGACCCAACTTCACAATACGCCTTGGTCTTCGTTTTGGAAGGAGTCTAAATGGGGGAGGAGAAGAAGAACAAGGGGTATAATCCCATCAATGATAAAGAAC
AAGGAAAAGAGGGCTGAAGTGCACGCGAACCTCAAGAACCAGAAGAAGCTTGAGAAATGCAAGAGGGCTAAGGCTCATACATTTTTGAAAGCAAGGAAAAGAAAAAAGAG
GCCGAGTCAAAAAAATAATTCGAAGGATACCAAGGTAAATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAAGAACAAAGAAAAGAGGACAGAAGTGCATGCGAACCTCAAGAACCAGAAGAAGCTTGAGAAATGCAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGAAAGC
TGTTGAACTTGGAGAAGAAATTCCTCGCACCATTGAGAACACCAGGGAACTGACGAGACTGTTTGCAGACCTGGTTCTTCTTTTGAACTCTCATTCCATCAAAAAGTGCC
GCATTTTGCCGAAAGTTCTAATTACTACTTGTCGTTTTAATTCTACGATTGGACCTGCTTTTATATCAGAGTTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGA
GGAAATAACGATTTGAAGAAGATTATAGAATATGCAAATGCCGAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAGTTGGATTCTTTTCTCGATCTAAT
GCAATGTTTTGAAATTCTAGATGGACTTGTAACTATTGGCTTACCTGAGGGACCTACTGCCGATTTCAAGATTTCGAATAGTCATGGAAATCCAACCGGTCATCAGCAAG
AACTTGTATTGACCCAACTTCACAATACGCCTTGGTCTTCGTTTTGGAAGGAGTCTAAATGGGGGAGGAGAAGAAGAACAAGGGGTATAATCCCATCAATGATAAAGAAC
AAGGAAAAGAGGGCTGAAGTGCACGCGAACCTCAAGAACCAGAAGAAGCTTGAGAAATGCAAGAGGGCTAAGGCTCATACATTTTTGAAAGCAAGGAAAAGAAAAAAGAG
GCCGAGTCAAAAAAATAATTCGAAGGATACCAAGGTAAATGATTAA
Protein sequenceShow/hide protein sequence
MIKNKEKRTEVHANLKNQKKLEKCKRAKARDAAEKKAVELGEEIPRTIENTRELTRLFADLVLLLNSHSIKKCRILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKR
GNNDLKKIIEYANAEDFTSLMVVHTSRRKLDSFLDLMQCFEILDGLVTIGLPEGPTADFKISNSHGNPTGHQQELVLTQLHNTPWSSFWKESKWGRRRRTRGIIPSMIKN
KEKRAEVHANLKNQKKLEKCKRAKAHTFLKARKRKKRPSQKNNSKDTKVND