CuGenDBv2

Gene ID	PI0018023
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	60S ribosomal protein L35-like
Genome location	chr10:16309453..16310650
RNA-Seq Expression	PI0018023
Synteny	PI0018023
Gene Ontology terms	GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR036049 - Ribosomal protein L29/L35 superfamily IPR045059 - 60S ribosomal protein L35

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004150961.1 60S ribosomal protein L35 [Cucumis sativus]

4.1e-37

79.67

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_008461617.1 PREDICTED: 60S ribosomal protein L35-like [Cucumis melo]

1.6e-36

78.86

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_022139337.1 60S ribosomal protein L35-2 [Momordica charantia]

2.7e-36

78.86

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]

4.5e-36

78.05

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

XP_038891782.1 60S ribosomal protein L35-like [Benincasa hispida]

9.1e-37

78.86

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQK+ALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLK6 Uncharacterized protein

2.0e-37

79.67

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A1S3CF13 60S ribosomal protein L35-like

7.5e-37

78.86

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKGDL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1CDN9 60S ribosomal protein L35-2

1.3e-36

78.86

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTERQKKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1FH81 60S ribosomal protein L35

2.2e-36

78.05

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L35

2.2e-36

78.05

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK DL   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMYYPLRKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

SwissProt top hits

e value

%identity

Alignment

O80626 60S ribosomal protein L35-2

1.4e-35

72.36

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL   L+  +  L            P+ +S  KVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-4

4.0e-35

72.36

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL   L+  +  L            P+ +S  KVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-3

6.8e-35

71.54

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL   L+ L+  L            P+ +S  KVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L35

4.0e-35

71.54

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+K +L   L+ L+  L            P+ +S  KVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-1

1.8e-35

72.36

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL   L+ L+  L            P+ +S  KVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Arabidopsis top hits

e value

%identity

Alignment

AT2G39390.1 Ribosomal L29 family protein

9.7e-37

72.36

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL   L+  +  L            P+ +S  KVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein

1.3e-36

72.36

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK DL   L+ L+  L            P+ +S  KVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein

4.8e-36

71.54

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL   L+ L+  L            P+ +S  KVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein

4.8e-36

71.54

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL   L+ L+  L            P+ +S  KVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKK+MY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein

2.8e-36

72.36

Show/hide

Query:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL   L+  +  L            P+ +S  KVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKGDLWPSLRTLRRSL------------PSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKEMYYPLRKYAIKV
        SLKTER+KKKEMY+P+RKYAIKV
Subjt:  SLKTERQKKKEMYYPLRKYAIKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAGAATTAAGGTTCATGAGCTTAGACAAAAGTCGAAGGGGGATCTTTGGCCCAGCTTAAGGACCTTAAGGCGGAGCTTGCCCTCCTCCGTGTCGCTAAGTAAGGT
AGTGAGGTTGTCTATCGCTCAGGTGTTGACAGTGATTTCTCAGAAGCAGAAGGCTGCTCTTAGAGAAGCTTACAAGAAGAAGAAGCTTTTGCCTCTTGATTTGCGCCCCA
AGAAGACCAGGGCCATCCGTAGAAGGCTCACCAAACACCAAGCATCTCTAAAGACGGAGCGACAGAAGAAGAAAGAGATGTACTACCCATTGAGGAAGTATGCCATTAAG
GTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MARIKVHELRQKSKGDLWPSLRTLRRSLPSSVSLSKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYAIK
V

PI0018023 (gene) of Melon (PI 482460) v1 genome