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PI0018039 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018039
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr10:4028206..4028876
RNA-Seq ExpressionPI0018039
SyntenyPI0018039
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-5582.71Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCHKRGHIL+NC T PP PP HSHKPKFS K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

KAA0043149.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-5582.71Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCHKRGHIL+NC T PP PP HSHKPKFS K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

KAA0047794.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.9e-5479.7Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYC+KRGHIL+NC T PP PPSHSHK KFS K GSS VV  AT SDI  P S QL DLHDLLKQV+SS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSD+S LSS  P QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

KAA0058316.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.6e-5480.45Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIEC+YCHKRGHIL+NC T PP PP HSHKPKF  K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS  P QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

KAA0065380.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.3e-5582.71Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCHKRGHIL+NC T PP PP HSHKPKFS K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

TrEMBL top hitse value%identityAlignment
A0A5A7SZ66 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-5682.71Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCHKRGHIL+NC T PP PP HSHKPKFS K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

A0A5A7TXR0 Putative mitochondrial protein9.4e-5579.7Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYC+KRGHIL+NC T PP PPSHSHK KFS K GSS VV  AT SDI  P S QL DLHDLLKQV+SS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSD+S LSS  P QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

A0A5A7U9K0 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-5478.95Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCH+RGHIL+NC T PP PP HSHKPKFS K  SS VVV AT SDI  P S QL DLHDLLKQ+ISS STAL  T GTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDS CCNHMTSDIS  SS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

A0A5A7VDW0 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-5682.71Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCHKRGHIL+NC T PP PP HSHKPKFS K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

A0A5D3DG18 Retrovirus-related Pol polyprotein from transposon TNT 1-946.5e-5682.71Show/hide
Query:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL
        KNCKLHGHKFANCPTIECRYCHKRGHIL+NC T PP PP HSHKPKFS K GSS VV  AT SDI  P S QL DLHDLLKQVISS STAL  TPGTSWL
Subjt:  KNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALVATPGTSWL

Query:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG
        LDSACCNHMTSDIS LSS IP QSLPPIHS DG
Subjt:  LDSACCNHMTSDISFLSSFIPTQSLPPIHSTDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCTCTTGCAACCATTCATCAACGACCTGCTAATGAGTCCACTTTCTGCAAAAAATTGTAAACTTCATGGCCATAAGTTTGCTAACTGTCCTACCATTGAGTGTAG
GTATTGTCATAAGCGAGGTCACATCTTGGAAAACTGTGTGACTTGTCCACCTTGTCCTCCTAGTCACTCACATAAACCAAAGTTTTCTCCTAAAACGGGTTCCTCCTTTG
TTGTTGTTGTTGCTACACCATCTGATATCATGACACCTCTGAGCTTTCAGTTAAATGATCTTCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCTCTTGTT
GCCACCCCAGGTACTTCTTGGCTCCTTGACTCAGCTTGTTGTAATCATATGACTTCTGACATTTCGTTCTTGTCTTCCTTTATTCCTACACAATCCCTTCCACCAATCCA
CTCTACTGATGGTTTAGGATCCACAGACGGGACAGGTGATTGGTACGGGATGGAAGGTGGGACGATTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCTCTTGCAACCATTCATCAACGACCTGCTAATGAGTCCACTTTCTGCAAAAAATTGTAAACTTCATGGCCATAAGTTTGCTAACTGTCCTACCATTGAGTGTAG
GTATTGTCATAAGCGAGGTCACATCTTGGAAAACTGTGTGACTTGTCCACCTTGTCCTCCTAGTCACTCACATAAACCAAAGTTTTCTCCTAAAACGGGTTCCTCCTTTG
TTGTTGTTGTTGCTACACCATCTGATATCATGACACCTCTGAGCTTTCAGTTAAATGATCTTCATGACTTACTGAAACAGGTGATCTCTTCCAACTCTACTGCTCTTGTT
GCCACCCCAGGTACTTCTTGGCTCCTTGACTCAGCTTGTTGTAATCATATGACTTCTGACATTTCGTTCTTGTCTTCCTTTATTCCTACACAATCCCTTCCACCAATCCA
CTCTACTGATGGTTTAGGATCCACAGACGGGACAGGTGATTGGTACGGGATGGAAGGTGGGACGATTATTTGA
Protein sequenceShow/hide protein sequence
MLLLQPFINDLLMSPLSAKNCKLHGHKFANCPTIECRYCHKRGHILENCVTCPPCPPSHSHKPKFSPKTGSSFVVVVATPSDIMTPLSFQLNDLHDLLKQVISSNSTALV
ATPGTSWLLDSACCNHMTSDISFLSSFIPTQSLPPIHSTDGLGSTDGTGDWYGMEGGTII