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PI0018057 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018057
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:1437424..1438305
RNA-Seq ExpressionPI0018057
SyntenyPI0018057
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.3e-6248.8Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+  SKNDSQVTIGSWISFWYLG RSYDKPTTRKQKK S SKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSGEGGSIYFGEYEAREL
Subjt:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        IHNGARIQWHA+LQN++KHERM D HDSSFLQ SY +SM SCYLSSRC NTWIITSYSPY+F RQFGFYQD+PNDIGG+ P  T  N L+H
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]9.7e-7056.27Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+T SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK SRSKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  --------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNQNKHERMSDAHDS
                                                     EVRGPKM+NFS EGGSIYFGEYEARELIHNGARIQWHASLQN++KHERM D HDS
Subjt:  --------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNQNKHERMSDAHDS

Query:  SFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        SFLQ+SYF+SMRSCYLSSRC NTWIITSYSPYRFGRQFGFYQD+PNDIGG+SP  T  N L+H
Subjt:  SFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]1.0e-6349.48Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+T SKNDSQVTIGSWISFWYLG RSYDKPTTRKQK  SRSKST+NPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSG GGSIYFGEYEAREL
Subjt:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        IHNGARIQWHA+LQN++KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWIITSYS YRFGRQFGFYQD+PNDIGG+ P  T  N L+H
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]4.2e-6549.83Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPDA-----------------------------------------------
        QRNDR+  SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK SRSKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPDA-----------------------------------------------

Query:  -------------------------------------------------------------------------EVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSGEGGSIYFGEYEAREL
Subjt:  -------------------------------------------------------------------------EVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        IHNG RIQWHA+L N+NKHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWIITSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N L+H
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]9.7e-6249.65Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+T SKNDSQVTIGSWISFWYLG RSYDKPTTRKQK  SRSKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSGEGGSIYFGEYEAR+L
Subjt:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPR
        IHNGARIQWHA+LQN +KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWIITSYSPYRFGRQFGFYQD+PNDIG      T R
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPR

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.6e-6248.8Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+  SKNDSQVTIGSWISFWYLG RSYDKPTTRKQKK S SKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSGEGGSIYFGEYEAREL
Subjt:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        IHNGARIQWHA+LQN++KHERM D HDSSFLQ SY +SM SCYLSSRC NTWIITSYSPY+F RQFGFYQD+PNDIGG+ P  T  N L+H
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

A0A5A7TX42 Uncharacterized protein4.7e-7056.27Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+T SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK SRSKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  --------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNQNKHERMSDAHDS
                                                     EVRGPKM+NFS EGGSIYFGEYEARELIHNGARIQWHASLQN++KHERM D HDS
Subjt:  --------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNQNKHERMSDAHDS

Query:  SFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        SFLQ+SYF+SMRSCYLSSRC NTWIITSYSPYRFGRQFGFYQD+PNDIGG+SP  T  N L+H
Subjt:  SFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

A0A5A7U8L3 PMD domain-containing protein5.0e-6449.48Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+T SKNDSQVTIGSWISFWYLG RSYDKPTTRKQK  SRSKST+NPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSG GGSIYFGEYEAREL
Subjt:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        IHNGARIQWHA+LQN++KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWIITSYS YRFGRQFGFYQD+PNDIGG+ P  T  N L+H
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

A0A5A7UGW6 PMD domain-containing protein2.0e-6549.83Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPDA-----------------------------------------------
        QRNDR+  SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK SRSKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPDA-----------------------------------------------

Query:  -------------------------------------------------------------------------EVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSGEGGSIYFGEYEAREL
Subjt:  -------------------------------------------------------------------------EVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH
        IHNG RIQWHA+L N+NKHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWIITSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N L+H
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH

A0A5A7VHW8 PMD domain-containing protein4.7e-6249.65Show/hide
Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------
        QRNDR+T SKNDSQVTIGSWISFWYLG RSYDKPTTRKQK  SRSKSTQNPD                                                
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPD------------------------------------------------

Query:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL
                                                                                 EVRGPKM+NFSGEGGSIYFGEYEAR+L
Subjt:  ------------------------------------------------------------------------AEVRGPKMSNFSGEGGSIYFGEYEAREL

Query:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPR
        IHNGARIQWHA+LQN +KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWIITSYSPYRFGRQFGFYQD+PNDIG      T R
Subjt:  IHNGARIQWHASLQNQNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAGAAATGACCGCACGACACCGTCCAAGAATGACTCCCAAGTCACTATTGGGTCTTGGATTTCATTTTGGTATCTTGGGCCCAGAAGCTATGATAAGCCAACTAC
AAGGAAGCAAAAGAAGGTGTCACGTTCCAAATCTACCCAAAATCCAGATGCCGAAGTTCGAGGTCCCAAGATGTCCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTG
GAGAATATGAGGCGCGAGAACTGATCCACAATGGTGCAAGAATTCAATGGCACGCAAGCCTTCAGAACCAAAATAAACATGAACGCATGTCCGATGCTCATGATTCATCT
TTTCTGCAGTCTTCCTATTTTATAAGCATGCGGTCATGCTACTTATCATCTCGCTGTGGAAATACTTGGATCATAACATCATATAGTCCATATCGGTTTGGGCGGCAGTT
TGGCTTTTACCAAGATATCCCTAACGATATAGGGGGTATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAGAAATGACCGCACGACACCGTCCAAGAATGACTCCCAAGTCACTATTGGGTCTTGGATTTCATTTTGGTATCTTGGGCCCAGAAGCTATGATAAGCCAACTAC
AAGGAAGCAAAAGAAGGTGTCACGTTCCAAATCTACCCAAAATCCAGATGCCGAAGTTCGAGGTCCCAAGATGTCCAACTTTTCTGGTGAAGGTGGGTCTATTTATTTTG
GAGAATATGAGGCGCGAGAACTGATCCACAATGGTGCAAGAATTCAATGGCACGCAAGCCTTCAGAACCAAAATAAACATGAACGCATGTCCGATGCTCATGATTCATCT
TTTCTGCAGTCTTCCTATTTTATAAGCATGCGGTCATGCTACTTATCATCTCGCTGTGGAAATACTTGGATCATAACATCATATAGTCCATATCGGTTTGGGCGGCAGTT
TGGCTTTTACCAAGATATCCCTAACGATATAGGGGGTATATCACCTGAAACCACGCCGAGGAATGCATTACATCATTGA
Protein sequenceShow/hide protein sequence
MQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSRSKSTQNPDAEVRGPKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNQNKHERMSDAHDSS
FLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALHH