; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018071 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018071
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:16972967..16973689
RNA-Seq ExpressionPI0018071
SyntenyPI0018071
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]3.8e-8866.25Show/hide
Query:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS
        Q ES   WPK LE   P+TC L FINNN+E++KSLWESL  E R +F+KAYG+I DL++T I+   LQAL HFWDP+LKCFTFN FDLTPT+EEYQ +IS
Subjt:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS

Query:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG
        +P    +K+Y+++RKLTLQRSLSKF+ D HAS++++QMKTKEGR+CI I+YLI+L   CL GKKGLSL  LC +   +  +IKGYVE EVVK+FVGIERG
Subjt:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG

Query:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VNP+IPI+AETFRSL++CR+QGKGKFF  A MLFIWISSH
Subjt:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]6.0e-8665Show/hide
Query:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS
        Q +S + WPK LE   P+TC L FINNN+E++KSLWESL  E R EF KAYG+I DL++T I+   LQAL HFWDP+LKCFTFN FDLTPT+EEYQ +IS
Subjt:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS

Query:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG
        +P    + +Y+++RKLTLQRSLSKF+ D HAS++++QMKTKEGR+CI I+YLI+L   CL  K GLSL  LC +   +  +IKGYVE EVVK+FVGIERG
Subjt:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG

Query:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VNP+IPI+AETFRSL++CR+QGKGKFF  A MLFIWISSH
Subjt:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]4.0e-5345.64Show/hide
Query:  MQQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMI
        MQQ+       S + S    C L F  N++ ++K +WE+LT + R  F K YG+I +LM+  ++  AL+A+++FWDP   CFTF + DL PT+EEYQ M+
Subjt:  MQQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMI

Query:  SIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSLW-LCAFLVQLSSQIKGYVETEVVKLFVGIER
        S+P   R  VY  N K T +R+LSKFL   HA++I++ +K K G   +  DYLI +T   +   KGL+L  LC +   +  + +GYV+ +V+KLF  +ER
Subjt:  SIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSLW-LCAFLVQLSSQIKGYVETEVVKLFVGIER

Query:  GVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        GVNPIIPILAETFRSL+YCR +G+GK      +L+IWI SH
Subjt:  GVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]4.6e-8665.42Show/hide
Query:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS
        Q ES   WPK LE   P+TC L FINNN+E++KSLWESL  E R EF KAYG+I DL++T I+   LQAL HFWDP+LK FTFN FDLTPT+EEYQ +IS
Subjt:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS

Query:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG
        +P    +K+Y+++RKLTLQRSLSKF+ D HAS++++ MKTKEGR+CI I+YLI+L   CL GKKGLSL  LC +   +  +IKGYVE EVVK+FVGIERG
Subjt:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG

Query:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VNP+IPI+AETFRSL++C++QGKGKFF  A MLFIWISSH
Subjt:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]3.5e-4963.87Show/hide
Query:  FDLTPTLEEYQVMISIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGY
        FDLTPT+EEY+ +IS+P    +K+Y+++RKLT++RSLSKF+ D HAS++++Q+K KEGR+CI I+YLI+L   CL  KKGLSL  LC +   +  +IKGY
Subjt:  FDLTPTLEEYQVMISIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGY

Query:  VETEVVKLFVGIERGVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VE EVVK+FVGIERGVNP+IPI+ ETFRSL++CR+QGKGKFF  A MLFIWISSH
Subjt:  VETEVVKLFVGIERGVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

TrEMBL top hitse value%identityAlignment
A0A5A7SUT0 Reverse transcriptase1.8e-8866.25Show/hide
Query:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS
        Q ES   WPK LE   P+TC L FINNN+E++KSLWESL  E R +F+KAYG+I DL++T I+   LQAL HFWDP+LKCFTFN FDLTPT+EEYQ +IS
Subjt:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS

Query:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG
        +P    +K+Y+++RKLTLQRSLSKF+ D HAS++++QMKTKEGR+CI I+YLI+L   CL GKKGLSL  LC +   +  +IKGYVE EVVK+FVGIERG
Subjt:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG

Query:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VNP+IPI+AETFRSL++CR+QGKGKFF  A MLFIWISSH
Subjt:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

A0A5A7TXA1 Glial fibrillary acidic protein-like2.9e-8665Show/hide
Query:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS
        Q +S + WPK LE   P+TC L FINNN+E++KSLWESL  E R EF KAYG+I DL++T I+   LQAL HFWDP+LKCFTFN FDLTPT+EEYQ +IS
Subjt:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS

Query:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG
        +P    + +Y+++RKLTLQRSLSKF+ D HAS++++QMKTKEGR+CI I+YLI+L   CL  K GLSL  LC +   +  +IKGYVE EVVK+FVGIERG
Subjt:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG

Query:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VNP+IPI+AETFRSL++CR+QGKGKFF  A MLFIWISSH
Subjt:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

A0A5A7UWQ6 Uncharacterized protein1.9e-5345.64Show/hide
Query:  MQQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMI
        MQQ+       S + S    C L F  N++ ++K +WE+LT + R  F K YG+I +LM+  ++  AL+A+++FWDP   CFTF + DL PT+EEYQ M+
Subjt:  MQQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMI

Query:  SIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSLW-LCAFLVQLSSQIKGYVETEVVKLFVGIER
        S+P   R  VY  N K T +R+LSKFL   HA++I++ +K K G   +  DYLI +T   +   KGL+L  LC +   +  + +GYV+ +V+KLF  +ER
Subjt:  SIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSLW-LCAFLVQLSSQIKGYVETEVVKLFVGIER

Query:  GVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        GVNPIIPILAETFRSL+YCR +G+GK      +L+IWI SH
Subjt:  GVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

A0A5A7VHI3 Uncharacterized protein2.2e-8665.42Show/hide
Query:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS
        Q ES   WPK LE   P+TC L FINNN+E++KSLWESL  E R EF KAYG+I DL++T I+   LQAL HFWDP+LK FTFN FDLTPT+EEYQ +IS
Subjt:  QQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMIS

Query:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG
        +P    +K+Y+++RKLTLQRSLSKF+ D HAS++++ MKTKEGR+CI I+YLI+L   CL GKKGLSL  LC +   +  +IKGYVE EVVK+FVGIERG
Subjt:  IPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGYVETEVVKLFVGIERG

Query:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VNP+IPI+AETFRSL++C++QGKGKFF  A MLFIWISSH
Subjt:  VNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

A0A5D3D0S2 Glial fibrillary acidic protein-like1.7e-4963.87Show/hide
Query:  FDLTPTLEEYQVMISIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGY
        FDLTPT+EEY+ +IS+P    +K+Y+++RKLT++RSLSKF+ D HAS++++Q+K KEGR+CI I+YLI+L   CL  KKGLSL  LC +   +  +IKGY
Subjt:  FDLTPTLEEYQVMISIPHSTRSKVYVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSL-WLCAFLVQLSSQIKGY

Query:  VETEVVKLFVGIERGVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH
        VE EVVK+FVGIERGVNP+IPI+ ETFRSL++CR+QGKGKFF  A MLFIWISSH
Subjt:  VETEVVKLFVGIERGVNPIIPILAETFRSLSYCRVQGKGKFFGWASMLFIWISSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAAGAGTCGGATACGGTTTGGCCCAAAAGTTTGGAAACTTCGTTTCCTCAGACATGTCACTTAGTGTTTATCAACAACAACATGGAAGACATAAAAAGCCTCTG
GGAGAGTTTGACTGAGGAACATAGAATAGAGTTCGTAAAAGCATATGGAAACATAGCTGACCTCATGTTTACAAACATTGATGTACATGCTCTACAAGCATTGGTGCATT
TTTGGGATCCTATTTTGAAATGTTTCACATTCAACGCATTTGATTTAACTCCTACTCTAGAGGAATATCAAGTCATGATCAGCATACCGCATTCCACCAGAAGTAAGGTT
TATGTGCATAACCGAAAGTTAACTCTACAAAGATCTTTATCCAAGTTTCTAAGTGACGCTCATGCATCTGATATAAGGGAACAAATGAAGACTAAGGAAGGGAGAAGTTG
TATCCTTATTGATTATTTAATTAGTCTTACATGCGTTTGTTTACCAGGGAAGAAAGGTTTGTCTCTTTGGCTCTGTGCATTTTTGGTACAATTATCTTCCCAAATCAAGG
GATACGTAGAAACGGAAGTTGTTAAGCTTTTTGTTGGAATAGAACGAGGAGTGAATCCCATAATTCCAATCCTAGCAGAAACCTTTAGATCGTTGAGCTATTGTCGAGTC
CAAGGCAAAGGAAAATTCTTCGGCTGGGCTTCAATGCTCTTCATATGGATTTCTAGTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACAAGAGTCGGATACGGTTTGGCCCAAAAGTTTGGAAACTTCGTTTCCTCAGACATGTCACTTAGTGTTTATCAACAACAACATGGAAGACATAAAAAGCCTCTG
GGAGAGTTTGACTGAGGAACATAGAATAGAGTTCGTAAAAGCATATGGAAACATAGCTGACCTCATGTTTACAAACATTGATGTACATGCTCTACAAGCATTGGTGCATT
TTTGGGATCCTATTTTGAAATGTTTCACATTCAACGCATTTGATTTAACTCCTACTCTAGAGGAATATCAAGTCATGATCAGCATACCGCATTCCACCAGAAGTAAGGTT
TATGTGCATAACCGAAAGTTAACTCTACAAAGATCTTTATCCAAGTTTCTAAGTGACGCTCATGCATCTGATATAAGGGAACAAATGAAGACTAAGGAAGGGAGAAGTTG
TATCCTTATTGATTATTTAATTAGTCTTACATGCGTTTGTTTACCAGGGAAGAAAGGTTTGTCTCTTTGGCTCTGTGCATTTTTGGTACAATTATCTTCCCAAATCAAGG
GATACGTAGAAACGGAAGTTGTTAAGCTTTTTGTTGGAATAGAACGAGGAGTGAATCCCATAATTCCAATCCTAGCAGAAACCTTTAGATCGTTGAGCTATTGTCGAGTC
CAAGGCAAAGGAAAATTCTTCGGCTGGGCTTCAATGCTCTTCATATGGATTTCTAGTCATTGA
Protein sequenceShow/hide protein sequence
MQQESDTVWPKSLETSFPQTCHLVFINNNMEDIKSLWESLTEEHRIEFVKAYGNIADLMFTNIDVHALQALVHFWDPILKCFTFNAFDLTPTLEEYQVMISIPHSTRSKV
YVHNRKLTLQRSLSKFLSDAHASDIREQMKTKEGRSCILIDYLISLTCVCLPGKKGLSLWLCAFLVQLSSQIKGYVETEVVKLFVGIERGVNPIIPILAETFRSLSYCRV
QGKGKFFGWASMLFIWISSH