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PI0018151 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018151
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr08:2310544..2312180
RNA-Seq ExpressionPI0018151
SyntenyPI0018151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]5.4e-5675.18Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T AISK++GKGKLPAQPD+ANVSAISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
KAA0038454.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.5e-5575.18Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+GH NDKCP+++E+ N++RKYDP+GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T AISK++GKGKLPAQPDHANVSAISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]9.2e-5674.47Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]7.0e-5673.76Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ +MKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T  ISK++GKGKLPAQPDH NVSAISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]9.2e-5674.47Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032913.4e-5673.76Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ +MKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T  ISK++GKGKLPAQPDH NVSAISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
A0A1S4E3R2 uncharacterized protein LOC1079919104.4e-5674.47Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
A0A5A7T4R3 Retrotransposon gag protein1.7e-5575.18Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+GH NDKCP+++E+ N++RKYDP+GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T AISK++GKGKLPAQPDHANVSAISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
A0A5D3DCG3 Retrotransposon gag protein4.4e-5674.47Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T  ISK++GKGKL AQPDHANVS ISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
E5GBZ4 Retrotransposon gag protein2.6e-5675.18Show/hide
Query:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL
        G  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN GWRDNPNLRWGN+NQ+ TQA PTS+NQGTNLED++KALATNT+SFQ EMKQQM+QL
Subjt:  GGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQL

Query:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
        T AISK++GKGKLPAQPD+ANVSAISLRS KIL  P ++EK
Subjt:  TNAISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATGGAAATACTTACAACGTCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTC
CTACTTCAAATAATCAAGGTACAAATTTGGAGGACTTGGTAAAAGCTCTTGCAACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAAC
GCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGACCATGCAAATGTAAGTGCCATCTCACTTAGAAGTTGTAAAATTCTGCAACCTCCTCCAAGTGA
AGAAAAGATTAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGTTGCCGGGGAGCGACGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGATTAATAGGACATCCCAATGATAAGTGCCCTGACCTAGTGGAAGAGGC
AAATGTCATTAGGAAGTACGATCCTCATGGAAATACTTACAACGTCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAGCAACTC
CTACTTCAAATAATCAAGGTACAAATTTGGAGGACTTGGTAAAAGCTCTTGCAACTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTAACAAAC
GCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAGCCTGACCATGCAAATGTAAGTGCCATCTCACTTAGAAGTTGTAAAATTCTGCAACCTCCTCCAAGTGA
AGAAAAGATTAATTCCTAA
Protein sequenceShow/hide protein sequence
MASLPGSDGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNVGWRDNPNLRWGNNNQQPTQATPTSNNQGTNLEDLVKALATNTISFQNEMKQQMSQLTN
AISKLEGKGKLPAQPDHANVSAISLRSCKILQPPPSEEKINS