; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018187 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018187
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNucleic acid-binding, OB-fold containing protein
Genome locationchr01:3715857..3717729
RNA-Seq ExpressionPI0018187
SyntenyPI0018187
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144523.1 uncharacterized protein At4g28440 [Cucumis sativus]1.5e-7198.62Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRVEVAEPANFE KEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_008455497.1 PREDICTED: uncharacterized protein At4g28440 [Cucumis melo]3.0e-72100Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_022136009.1 uncharacterized protein At4g28440-like [Momordica charantia]5.3e-6995.17Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_022988994.1 uncharacterized protein At4g28440-like [Cucurbita maxima]1.5e-6893.79Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPA NAPAKRKPVF+KVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGRS M TARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPA+FEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

XP_038887250.1 uncharacterized protein At4g28440-like [Benincasa hispida]8.7e-7299.31Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPA NAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

TrEMBL top hitse value%identityAlignment
A0A0A0K1C6 Uncharacterized protein7.2e-7298.62Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRVEVAEPANFE KEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A1S3C119 uncharacterized protein At4g284401.5e-72100Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A5A7UWS4 Uncharacterized protein1.5e-72100Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A6J1C327 uncharacterized protein At4g28440-like2.6e-6995.17Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MAT A NAPAKRKPVF+KVEELKPGTSGHTL VKVVSSKNVK+VNKGGRS MLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPANFEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

A0A6J1JN47 uncharacterized protein At4g28440-like7.5e-6993.79Show/hide
Query:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI
        MATPA NAPAKRKPVF+KVE+LKPG+SGHTLTVKVVSSKNVKVVNKGGRS M TARPQQLTRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKI
Subjt:  MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKI

Query:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DMFKGSMRLAVDKWGR+EVAEPA+FEVKEDNNLSLVEYELVNVEE
Subjt:  DMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284402.2e-4665.49Show/hide
Query:  ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID
        A     +  KRKPVFVKVE+LKPGT+GHTLTVKV+ +  V  V +  R     +RP Q +RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++ID
Subjt:  ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID

Query:  MFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNV
        MFKG+MRL VDKWGR+E    A+F VKEDNNLSLVEYEL+NV
Subjt:  MFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNV

Q97W73 Single-stranded DNA binding protein Ssb8.1e-0429.36Show/hide
Query:  KVEELKPGTSGHTLTVKVVSSKNVK-VVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGR
        KV  LKP      +TV+V+ +   + +  K G  T           ISE +VGDETG +  T        +K G  V + NA    FKG ++L      +
Subjt:  KVEELKPGTSGHTLTVKVVSSKNVK-VVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGR

Query:  VEVAEPANF
        +  A    F
Subjt:  VEVAEPANF

Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein1.8e-4368.38Show/hide
Query:  AKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL
        A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVGDETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRL
Subjt:  AKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL

Query:  AVDKWGRVEVA-EPANFEVKEDNNLSLVEYELVNVE
        AVD+WGRVEVA EP +  VK+DNNLSL+EYELV+VE
Subjt:  AVDKWGRVEVA-EPANFEVKEDNNLSLVEYELVNVE

AT1G10590.3 Nucleic acid-binding, OB-fold-like protein1.8e-4368.38Show/hide
Query:  AKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL
        A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVGDETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRL
Subjt:  AKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRL

Query:  AVDKWGRVEVA-EPANFEVKEDNNLSLVEYELVNVE
        AVD+WGRVEVA EP +  VK+DNNLSL+EYELV+VE
Subjt:  AVDKWGRVEVA-EPANFEVKEDNNLSLVEYELVNVE

AT1G23750.1 Nucleic acid-binding, OB-fold-like protein3.3e-4569.4Show/hide
Query:  RKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAV
        +KP F KV++L+PGTSGH + VK+VS+   K+V + GR+    AR     RISEC+VGDETG IVFTARNDQVD+MK G+TVTLRNAKIDM+KGSMRLAV
Subjt:  RKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAV

Query:  DKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        DKWGRVEV EPA+F+VKED N+SL+EYELVNV E
Subjt:  DKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

AT2G33845.1 Nucleic acid-binding, OB-fold-like protein6.1e-4769.72Show/hide
Query:  PAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMF
        P      K+KPVFVKV++LKPGTSGHTLTVKVV   +V    K G ++    RP    RISECLVGDET  I+FTARNDQV++MKPG TV LRNAKIDMF
Subjt:  PAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMF

Query:  KGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE
        KGSMRLAVDKWGR+E  EPA+  VKEDNNLSLVEYELVNV E
Subjt:  KGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE

AT4G28440.1 Nucleic acid-binding, OB-fold-like protein1.6e-4765.49Show/hide
Query:  ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID
        A     +  KRKPVFVKVE+LKPGT+GHTLTVKV+ +  V  V +  R     +RP Q +RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++ID
Subjt:  ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKID

Query:  MFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNV
        MFKG+MRL VDKWGR+E    A+F VKEDNNLSLVEYEL+NV
Subjt:  MFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGCCAGCAGCGAATGCTCCAGCAAAGAGGAAGCCTGTATTCGTAAAAGTAGAAGAGCTAAAGCCTGGTACCAGCGGCCACACTCTCACCGTCAAGGTTGTGAG
TTCCAAAAATGTTAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACTGCTCGCCCTCAGCAATTAACTCGAATCTCTGAATGTCTTGTTGGTGATGAGACTGGTT
CCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTAAGGAATGCAAAGATTGACATGTTCAAAGGTTCTATGAGGTTAGCA
GTAGATAAATGGGGACGAGTTGAAGTAGCTGAACCAGCCAACTTTGAGGTTAAAGAAGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
GCGAAATTAAATTCTTAGGGTTAGGGTTTTGACCCTCAGGTTCGATTTCATTCTCCATTTTCACGTTCTATTTTCATCGGCAACCGGAATTCGCTCAAATTCTTGGATTT
CCATGGCGACGCCAGCAGCGAATGCTCCAGCAAAGAGGAAGCCTGTATTCGTAAAAGTAGAAGAGCTAAAGCCTGGTACCAGCGGCCACACTCTCACCGTCAAGGTTGTG
AGTTCCAAAAATGTTAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACTGCTCGCCCTCAGCAATTAACTCGAATCTCTGAATGTCTTGTTGGTGATGAGACTGG
TTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTAAGGAATGCAAAGATTGACATGTTCAAAGGTTCTATGAGGTTAG
CAGTAGATAAATGGGGACGAGTTGAAGTAGCTGAACCAGCCAACTTTGAGGTTAAAGAAGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGA
CCTGAAATTATGCAATGTTAATTATCATGGATTTACTTTCTTTATTGTGTGGTGGACTGCTATTTAACTGGTATACAGTTTCTATATGGCAACACAAAAATCTTGCTGAG
AGTAATATAAGTTGATTATTGATGTGCCTAACTATGCTTAATTTGGATCTGATGTGATAAAGATCTTCAAAGGCAAAGTGCAAATGTTACTTTCTGGTCTACTTATTATT
TTGAAAAGTAAATAGAATGCTTTACCAATGTACCTTCGTTTCGGTGCCTTATTTCTA
Protein sequenceShow/hide protein sequence
MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLA
VDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE