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PI0018193 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018193
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:1594890..1595492
RNA-Seq ExpressionPI0018193
SyntenyPI0018193
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042500.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-6066.67Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC
        M+TS+RAL+H WTKEE   LVECL+ELVS  GW+SDNGTFRP Y + L +M+AE++PG  + ATT ID RIKT+KR FQAI+EM GP+ SGFGWNDE KC
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC

Query:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGNCNDP
        I+VEK+L+D+WV+SHP AKGLLNKPFP+YD+L YVFGRDRAT   AETF DVGSN P  G++ F   DGN + P
Subjt:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGNCNDP

KAA0052259.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-6065.88Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC
        M+TS+RA +H WTKEE   LVECL+ELVS  GW+SDNGTFRP Y + L +M+AE++PG+ + ATT ID RIKT+KR FQAI+E++GP+ SGFGWNDE KC
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC

Query:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGN
        I+ EK+L+D+WV+SHP AKGLLNKPFP+YD+L YVFGRDRAT   AETF DVGSN P  G++ F   DGN
Subjt:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGN

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-6068.12Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI
        M +SSR  KH WTKEE   LVECLVELV++ GWRSDNGTFRP Y + L +M+A ++PG NI A+TID RIK MKR F A++EM+GP+ SGFGWNDE KCI
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI

Query:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFE
        +VEK+L+D WVKSHP AKGLLNK F HYD+L YVFG+DRAT GRAE+F D+GSN PPG++
Subjt:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFE

TYK15304.1 retrotransposon protein [Cucumis melo var. makuwa]4.1e-6066.67Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI
        MT+SSR  KH WTKEE   LVECLVELV++SGWRSDNGTF P+Y + L +M+A ++PG NI A+TID RIK MKR F A++EM+GP+ SGFGWNDE KCI
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI

Query:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGF
        + EK+++D WVKSHP AKGLLNK FPHYD+  YVFG+DRAT GRA++F DVGSN P G++ F
Subjt:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGF

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]7.5e-6265.68Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC
        MT+SSRA KH WTKEE   LVEC+V+LVS+  W+SDNGTFRP Y + L +M+  ++PG N+ ATT ID+RIKT+KR++QAI+EM+GPS SGFGWND+ KC
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC

Query:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGFPHYDGN
        II EK+ +D+WV+SHP AKGLLNKPFP+YD   YVFG+DRA     ETF DVGSNVPPGFE FP  D N
Subjt:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGFPHYDGN

TrEMBL top hitse value%identityAlignment
A0A5A7TGP1 Retrotransposon protein5.3e-6166.67Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC
        M+TS+RAL+H WTKEE   LVECL+ELVS  GW+SDNGTFRP Y + L +M+AE++PG  + ATT ID RIKT+KR FQAI+EM GP+ SGFGWNDE KC
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC

Query:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGNCNDP
        I+VEK+L+D+WV+SHP AKGLLNKPFP+YD+L YVFGRDRAT   AETF DVGSN P  G++ F   DGN + P
Subjt:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGNCNDP

A0A5A7U098 Retrotransposon protein2.0e-6067.28Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI
        M +SSR  KH WTKEE   LVECLVELV++ GWRSDNGTFRP Y + L +M+A ++PG NI A+TID RIK MKR F A++EM+GP+ SGFGWNDE KCI
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI

Query:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGF
        +VEK+L+D WVKSHP AKGLLNK F HYD+L YVFG+DRAT GRAE+F D+GSN P G++ F
Subjt:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGF

A0A5A7UFK7 Retrotransposon protein2.0e-6065.88Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC
        M+TS+RA +H WTKEE   LVECL+ELVS  GW+SDNGTFRP Y + L +M+AE++PG+ + ATT ID RIKT+KR FQAI+E++GP+ SGFGWNDE KC
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC

Query:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGN
        I+ EK+L+D+WV+SHP AKGLLNKPFP+YD+L YVFGRDRAT   AETF DVGSN P  G++ F   DGN
Subjt:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVP-PGFEGFPHYDGN

A0A5A7VKT2 Retrotransposon protein2.0e-6064.77Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC
        M+TS+RA +H WTKEE   LVECL+ELVS  GW+SDNGTFRP Y + L +M+AE++PG  + ATT ID RIKT+KR FQAI+EM+GP+ SGFGWNDE+KC
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATT-IDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKC

Query:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSN-VPPGFEGFPHYDGNCNDPTL
        II EK+L+D+WV+SHP AKGLLNKPFP+YD+L YVFGRDRAT   AETF DVGSN +  G++ F   DGN + P +
Subjt:  IIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSN-VPPGFEGFPHYDGNCNDPTL

A0A5D3C1M0 Retrotransposon protein5.3e-6168.12Show/hide
Query:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI
        M +SSR  KH WTKEE   LVECLVELV++ GWRSDNGTFRP Y + L +M+A ++PG NI A+TID RIK MKR F A++EM+GP+ SGFGWNDE KCI
Subjt:  MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCI

Query:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFE
        +VEK+L+D WVKSHP AKGLLNK F HYD+L YVFG+DRAT GRAE+F D+GSN PPG++
Subjt:  IVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.1 unknown protein2.0e-0430.61Show/hide
Query:  YSGFGWNDELKCIIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFG
        + GF W+   + +I +  L+  ++K+HP A+    KP  ++ DLC ++G
Subjt:  YSGFGWNDELKCIIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFG

AT2G24960.2 unknown protein3.5e-0923.36Show/hide
Query:  WTKEEHVVLVECLVELVS----------SSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCII
        WT      L++ LVE V+          +S W      F  K+ S   K + +              R K ++R +  I  +     +GF W+     +I
Subjt:  WTKEEHVVLVECLVELVS----------SSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCII

Query:  VEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRD
         + D++++++++HP A+    K  P Y +LC++FG++
Subjt:  VEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFGRD

AT4G02210.1 unknown protein1.0e-0824.24Show/hide
Query:  GTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCIIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFG
        G FR +  + +  +   +    N     +  R K+++R F AI  +      GF W++E + +  + +++  ++K+H  A+  + +P P+Y DLC + G
Subjt:  GTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCIIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFG

AT4G02210.2 unknown protein1.0e-0824.24Show/hide
Query:  GTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCIIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFG
        G FR +  + +  +   +    N     +  R K+++R F AI  +      GF W++E + +  + +++  ++K+H  A+  + +P P+Y DLC + G
Subjt:  GTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCIIVEKDLYDSWVKSHPTAKGLLNKPFPHYDDLCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTTCTTCAAGGGCCCTGAAGCACCACTGGACGAAAGAGGAACATGTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCTTCCAGCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCTAAATACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCCGGGACATAACATAACGGCTACGACAATAGATTTTCGAATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGAAGGGCCCATCGTATAGTGGATTTGGTTGGAATGATGAGCTGAAATGCATCATTGTCGAGAAAGACTTGTATGACAGTTGG
GTGAAGAGTCATCCAACCGCAAAGGGCCTCCTAAACAAACCCTTTCCCCACTACGACGACCTTTGCTATGTCTTCGGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAAC
CTTCGGCGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAAGGATTTCCCCACTATGACGGGAACTGTAACGACCCGACTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTTCTTCAAGGGCCCTGAAGCACCACTGGACGAAAGAGGAACATGTCGTCCTCGTTGAATGTCTGGTGGAGTTGGTATCTTCCAGCGGGTGGAGGTCGGATAA
CGGGACGTTTAGACCTAAATACCATAGTCATCTACAGAAAATGATTGCCGAGAGGATGCCGGGACATAACATAACGGCTACGACAATAGATTTTCGAATCAAGACAATGA
AAAGAGCATTCCAAGCGATATCTGAAATGAAGGGCCCATCGTATAGTGGATTTGGTTGGAATGATGAGCTGAAATGCATCATTGTCGAGAAAGACTTGTATGACAGTTGG
GTGAAGAGTCATCCAACCGCAAAGGGCCTCCTAAACAAACCCTTTCCCCACTACGACGACCTTTGCTATGTCTTCGGAAGAGATCGTGCAACAAGAGGTCGAGCTGAAAC
CTTCGGCGATGTTGGGTCGAACGTGCCTCCAGGCTTCGAAGGATTTCCCCACTATGACGGGAACTGTAACGACCCGACTCTCTAA
Protein sequenceShow/hide protein sequence
MTTSSRALKHHWTKEEHVVLVECLVELVSSSGWRSDNGTFRPKYHSHLQKMIAERMPGHNITATTIDFRIKTMKRAFQAISEMKGPSYSGFGWNDELKCIIVEKDLYDSW
VKSHPTAKGLLNKPFPHYDDLCYVFGRDRATRGRAETFGDVGSNVPPGFEGFPHYDGNCNDPTL