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PI0018210 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018210
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCold-regulated protein
Genome locationchr06:13283931..13284445
RNA-Seq ExpressionPI0018210
SyntenyPI0018210
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457074.1 PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]3.7e-3797.4Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
XP_022143411.1 uncharacterized protein LOC111013291 [Momordica charantia]2.0e-3596.1Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
XP_022935253.1 uncharacterized protein LOC111442190 [Cucurbita moschata]9.1e-3693.51Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
XP_023528466.1 uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]7.0e-3694.81Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVPIC+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
XP_031737948.1 uncharacterized protein LOC116402578 [Cucumis sativus]6.3e-3798.7Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
TrEMBL top hitse value%identityAlignment
A0A0A0LA45 Uncharacterized protein3.1e-3798.7Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
A0A1S3C5C8 uncharacterized protein LOC1034968421.8e-3797.4Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
A0A2N9J3H0 Uncharacterized protein7.8e-3385.71Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        M  GIG+P+C++CGT SNPCRCKVVGPTLGFLAFAVAA+VEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNA+PI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
A0A6J1CQ64 uncharacterized protein LOC1110132919.8e-3696.1Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIMAHPATVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
A0A6J1FA13 uncharacterized protein LOC1114421904.4e-3693.51Show/hide
Query:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIMAHP TVVYPSVSNAVPI
Subjt:  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G03341.1 unknown protein2.2e-2770.42Show/hide
Query:  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI
        +PIC++CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALV+ F+H KGRRIM HPAT VYP VS ++PI
Subjt:  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTGGAATCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGCTTTTTGGCTTTCGCTGTGGC
GGCTGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTCTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCAGCTACTGTGGTATACCCGTCGGTGTCTAATG
CGGTTCCGATTTGA
mRNA sequenceShow/hide mRNA sequence
CAAATTCCCAAATTCCCTACTTTTAATTTACCAACTCTCGCCGAATTCGTCCTCTTCCTATTGTTCGTTATACCATCCGTTGTGCTCCGGTAACTTAATCCGGCGAATGG
CTGTTGGAATCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGCTTTTTGGCTTTCGCTGTGGCGGCT
GTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTCTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCAGCTACTGTGGTATACCCGTCGGTGTCTAATGCGGT
TCCGATTTGAGAGAATACGCAACTAATTAATGCCGTTCCTTTACATGTTTATTTTCCCATGTCCAATGTATAATAATAATGCATCTCAATTTAAGAGTTAAATTAATAGC
CTAAATATATACCCTATGTCTCTTCTCATATATGTCTACCCAACTAATAATAACAATTGTAATTTAATAAATAAA
Protein sequenceShow/hide protein sequence
MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI