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PI0018213 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018213
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr07:6197615..6197782
RNA-Seq ExpressionPI0018213
SyntenyPI0018213
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036810.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]7.5e-0860Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        MSP+++ G  PG S EG+T S+G KRKRGGQ  ++ EII+NA ++ANDQLK IAE
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
KAA0060365.1 retrotransposon protein [Cucumis melo var. makuwa]8.9e-0965.45Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        M PDD+ G  P RS E RTGSSGSKRK+GGQ  + VEII++AM++ N QLKAIAE
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-0861.82Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        M  DD+ G  P RS EGRTGSSGSKRK+GGQ  + +EII+N M+ +ND+LKAI E
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
KAA0061292.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]9.8e-0867.27Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        MSPDD  G   GRS EGR GS GSKRK+G QT + V+II NAM++ANDQLK IAE
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
TYK01364.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-0762.75Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLK
        MSPDD+ G  PG S +GR  S GSKRKRGG T + VEII+  M++ANDQLK
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLK
TrEMBL top hitse value%identityAlignment
A0A5A7T0C2 RING-H2 finger protein ATL663.6e-0860Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        MSP+++ G  PG S EG+T S+G KRKRGGQ  ++ EII+NA ++ANDQLK IAE
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
A0A5A7UZF5 RING-H2 finger protein ATL664.8e-0867.27Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        MSPDD  G   GRS EGR GS GSKRK+G QT + V+II NAM++ANDQLK IAE
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
A0A5A7V3C0 Retrotransposon protein4.3e-0965.45Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        M PDD+ G  P RS E RTGSSGSKRK+GGQ  + VEII++AM++ N QLKAIAE
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
A0A5A7V469 Retrotransposon protein1.3e-0861.82Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
        M  DD+ G  P RS EGRTGSSGSKRK+GGQ  + +EII+N M+ +ND+LKAI E
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE
A0A5D3BQB5 Retrotransposon protein6.2e-0862.75Show/hide
Query:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLK
        MSPDD+ G  PG S +GR  S GSKRKRGG T + VEII+  M++ANDQLK
Subjt:  MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCTGATGACATGGCGGGCGTAGGTCCGGGTCGCTCGGTGGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGGAAGCGAGGAGGCCAGACAGCACAGATTGTGGA
GATCATTCAGAATGCAATGGACTTTGCCAACGACCAGTTGAAGGCCATTGCAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCTGATGACATGGCGGGCGTAGGTCCGGGTCGCTCGGTGGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGGAAGCGAGGAGGCCAGACAGCACAGATTGTGGA
GATCATTCAGAATGCAATGGACTTTGCCAACGACCAGTTGAAGGCCATTGCAGAGTGA
Protein sequenceShow/hide protein sequence
MSPDDMAGVGPGRSVEGRTGSSGSKRKRGGQTAQIVEIIQNAMDFANDQLKAIAE