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PI0018263 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018263
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr11:15636150..15637274
RNA-Seq ExpressionPI0018263
SyntenyPI0018263
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.1e-3343.89Show/hide
Query:  VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDL-PNDAETPGQIYVVSPTRRMAREAL
        +EKG+FPF   L  FL +PI+A  WKQFF+G T +R  V+  FY   +N +     + GK V+F  + +N L+ L     E P       P+    + AL
Subjt:  VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDL-PNDAETPGQIYVVSPTRRMAREAL

Query:  KVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWM
        + +AWPG  W  TP  KYQL+PH L T  SVWL FIKK + PTRHDNTI+LE  MLLYCI+ +  +N+ ++I   I +W+
Subjt:  KVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWM

KAA0049609.1 transposase [Cucumis melo var. makuwa]6.0e-3247.85Show/hide
Query:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML
        +  + V F  E IN L+DLPND    PGQ  +V      A++ +K+I WP A    TPT + QL+PHQLT E +VWLFFIKKKIFPT HD+TI  E  ++
Subjt:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML

Query:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN
        LYCI  KK  NLG ++  + LSWMR PK   PFP+T++ LC+K +      I  I + G  CN
Subjt:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]3.9e-3137.23Show/hide
Query:  DEVLSNSLIK---VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYV
        D+VLS    K   VEKG F F   L  FL  PI+A GW++F +G   +R GVV+ FY  K++ ++    +  +               P+D +       
Subjt:  DEVLSNSLIK---VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYV

Query:  VSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLP
                +EAL+ +AW    W  T   KY+L+ H LTTE SVWL FIKKK+ PTRHDNTI+ E  MLLYCI+ +  V++ ++I   I +W++ P+G  P
Subjt:  VSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLP

Query:  FPSTIEALCVKVVPFLSAINSIP-IPGSLCN
        FP  IE LC++    L     I  +   +CN
Subjt:  FPSTIEALCVKVVPFLSAINSIP-IPGSLCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]2.3e-3949.12Show/hide
Query:  KLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTG-KYQLYPHQLTTEVSVWL
        K+R+ VV KFY  K N  +  + I  +   FN E IN L++ PNDAE  GQ  V   T+ +A+EALKV+AWPG   +  P   +YQLYPH LTT+ +VW+
Subjt:  KLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTG-KYQLYPHQLTTEVSVWL

Query:  FFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVVPFL
        FF K KIFPT +D+TI+++ T++LYCI+ KK +NL ++I  +IL+WM  PK  +PFPS +E LC+K +P L
Subjt:  FFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVVPFL

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]6.0e-3247.85Show/hide
Query:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML
        +  + V F  E IN L+DLPND    PGQ  +V      A++ +K+I WP A    TPT + QL+PHQLT E +VWLFFIKKKIFPT HD+TI  E  ++
Subjt:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML

Query:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN
        LYCI  KK  NLG ++  + LSWMR PK   PFP+T++ LC+K +      I  I + G  CN
Subjt:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN

TrEMBL top hitse value%identityAlignment
A0A5A7TZE0 Protein MNN4-like5.3e-3443.89Show/hide
Query:  VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDL-PNDAETPGQIYVVSPTRRMAREAL
        +EKG+FPF   L  FL +PI+A  WKQFF+G T +R  V+  FY   +N +     + GK V+F  + +N L+ L     E P       P+    + AL
Subjt:  VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDL-PNDAETPGQIYVVSPTRRMAREAL

Query:  KVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWM
        + +AWPG  W  TP  KYQL+PH L T  SVWL FIKK + PTRHDNTI+LE  MLLYCI+ +  +N+ ++I   I +W+
Subjt:  KVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWM

A0A5A7U806 Transposase2.9e-3247.85Show/hide
Query:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML
        +  + V F  E IN L+DLPND    PGQ  +V      A++ +K+I WP A    TPT + QL+PHQLT E +VWLFFIKKKIFPT HD+TI  E  ++
Subjt:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML

Query:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN
        LYCI  KK  NLG ++  + LSWMR PK   PFP+T++ LC+K +      I  I + G  CN
Subjt:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN

A0A5A7V6M5 Gag/pol protein1.1e-3949.12Show/hide
Query:  KLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTG-KYQLYPHQLTTEVSVWL
        K+R+ VV KFY  K N  +  + I  +   FN E IN L++ PNDAE  GQ  V   T+ +A+EALKV+AWPG   +  P   +YQLYPH LTT+ +VW+
Subjt:  KLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTG-KYQLYPHQLTTEVSVWL

Query:  FFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVVPFL
        FF K KIFPT +D+TI+++ T++LYCI+ KK +NL ++I  +IL+WM  PK  +PFPS +E LC+K +P L
Subjt:  FFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVVPFL

A0A5D3CVL7 Uncharacterized protein2.9e-3247.85Show/hide
Query:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML
        +  + V F  E IN L+DLPND    PGQ  +V      A++ +K+I WP A    TPT + QL+PHQLT E +VWLFFIKKKIFPT HD+TI  E  ++
Subjt:  ISGKTVSFNAEAINTLHDLPND-AETPGQIYVVSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTML

Query:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN
        LYCI  KK  NLG ++  + LSWMR PK   PFP+T++ LC+K +      I  I + G  CN
Subjt:  LYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVV-PFLSAINSIPIPGSLCN

A0A5D3DVQ6 Uncharacterized protein1.9e-3137.23Show/hide
Query:  DEVLSNSLIK---VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYV
        D+VLS    K   VEKG F F   L  FL  PI+A GW++F +G   +R GVV+ FY  K++ ++    +  +               P+D +       
Subjt:  DEVLSNSLIK---VEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYV

Query:  VSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLP
                +EAL+ +AW    W  T   KY+L+ H LTTE SVWL FIKKK+ PTRHDNTI+ E  MLLYCI+ +  V++ ++I   I +W++ P+G  P
Subjt:  VSPTRRMAREALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLP

Query:  FPSTIEALCVKVVPFLSAINSIP-IPGSLCN
        FP  IE LC++    L     I  +   +CN
Subjt:  FPSTIEALCVKVVPFLSAINSIP-IPGSLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTGCGATGAAGTTCTATCAAACTCCCTCATCAAGGTTGAGAAAGGGTTGTTTCCGTTTAATAGTTCACTCCTAGACTTCCTTTACGCGCCCATCCAGGCGTTCGG
GTGGAAACAATTCTTCAAGGGGCACACCAAGTTAAGATTGGGGGTAGTGGAAAAATTCTATGTGGCTAAACTCAATGCTGACGAGTTTAGCGTGGATATCAGTGGCAAGA
CAGTCAGCTTCAACGCGGAGGCCATCAACACATTACATGATTTGCCCAATGATGCTGAAACGCCTGGGCAAATATACGTGGTTAGCCCCACAAGAAGGATGGCCCGTGAA
GCGTTGAAAGTAATCGCATGGCCTGGGGCCGCATGGAAAGGGACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCACAGAGGTGAGCGTGTGGCTTTTCTT
CATAAAAAAGAAGATCTTCCCAACACGCCATGACAACACCATTAACTTAGAGTTAACGATGCTACTCTATTGTATATTGACGAAGAAATGCGTCAACCTTGGCGATCTGA
TAGCCACATCCATTCTGTCTTGGATGCGAGCTCCTAAGGGCACCTTGCCCTTCCCATCCACCATTGAAGCCCTCTGTGTTAAGGTCGTACCATTCCTCAGCGCCATCAAT
TCAATTCCAATCCCAGGCAGTTTGTGCAACCAAATGGCTTTGAATAGCATGATAACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACTTTGGATGACACACC
TGAAGGAATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAGCCGCCGCATCTACCCCTCCACCGAAAGTAAAAAAACCAAGGGTAGATGTGGCGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTGCGATGAAGTTCTATCAAACTCCCTCATCAAGGTTGAGAAAGGGTTGTTTCCGTTTAATAGTTCACTCCTAGACTTCCTTTACGCGCCCATCCAGGCGTTCGG
GTGGAAACAATTCTTCAAGGGGCACACCAAGTTAAGATTGGGGGTAGTGGAAAAATTCTATGTGGCTAAACTCAATGCTGACGAGTTTAGCGTGGATATCAGTGGCAAGA
CAGTCAGCTTCAACGCGGAGGCCATCAACACATTACATGATTTGCCCAATGATGCTGAAACGCCTGGGCAAATATACGTGGTTAGCCCCACAAGAAGGATGGCCCGTGAA
GCGTTGAAAGTAATCGCATGGCCTGGGGCCGCATGGAAAGGGACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCACAGAGGTGAGCGTGTGGCTTTTCTT
CATAAAAAAGAAGATCTTCCCAACACGCCATGACAACACCATTAACTTAGAGTTAACGATGCTACTCTATTGTATATTGACGAAGAAATGCGTCAACCTTGGCGATCTGA
TAGCCACATCCATTCTGTCTTGGATGCGAGCTCCTAAGGGCACCTTGCCCTTCCCATCCACCATTGAAGCCCTCTGTGTTAAGGTCGTACCATTCCTCAGCGCCATCAAT
TCAATTCCAATCCCAGGCAGTTTGTGCAACCAAATGGCTTTGAATAGCATGATAACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACTTTGGATGACACACC
TGAAGGAATGGCCCAAGTAGAACGCAAAAGGAAGTCCCCAGCCGCCGCATCTACCCCTCCACCGAAAGTAAAAAAACCAAGGGTAGATGTGGCGAAGTAG
Protein sequenceShow/hide protein sequence
MPCDEVLSNSLIKVEKGLFPFNSSLLDFLYAPIQAFGWKQFFKGHTKLRLGVVEKFYVAKLNADEFSVDISGKTVSFNAEAINTLHDLPNDAETPGQIYVVSPTRRMARE
ALKVIAWPGAAWKGTPTGKYQLYPHQLTTEVSVWLFFIKKKIFPTRHDNTINLELTMLLYCILTKKCVNLGDLIATSILSWMRAPKGTLPFPSTIEALCVKVVPFLSAIN
SIPIPGSLCNQMALNSMITFHGHKEMERRAKTLDDTPEGMAQVERKRKSPAAASTPPPKVKKPRVDVAK