; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018343 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018343
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr01:13169702..13170678
RNA-Seq ExpressionPI0018343
SyntenyPI0018343
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]2.4e-9162.33Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSY----------------FIITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEARELIHNGARIQWHANLQN++KHERM D HDS FLQ SY                +IITSYSPY+F RQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSY----------------FIITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP IT  N L+HWRICTRR TL ELY+P RSLE  KHVT RF +WW TKH TYFEDNRHHLVSSAIPP SQ +LPKNRG N+GGK+I L+E M P     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           HK E  SS  +     P KKA+ SGD     G SA+E+ +V   +SPL+ H +GL+E  SD+SLT PH V+ A EEVGTSK PV KP E
Subjt:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.5e-9563.36Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEARELIHNGARIQWHA+LQN++KHERM D HDS FLQ+SYF                IITSYSPYRFGRQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPTHKRE
         P IT  N L+HWRICTRR TL ELY+P RSLE  KHVT RF +WW TKH TYFEDNRHHLVSSAIPP+SQP+LPKNRGSN+GGK+I L+E M P  + E
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPTHKRE

Query:  KRSSLEE------------PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
         +   +E            P KKAK SGD   G G SA+E+ +V   LSPL+ H +GL+E  SD+SLT PH V+SA EEVGTS+ PV KP E
Subjt:  KRSSLEE------------PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]4.9e-8961.99Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS  GGSIYFGEYEARELIHNGARIQWHANLQN++KHERM D HDS FLQ SYF                IITSYS YRFGRQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP IT  N L+H RICTR  TL ELY+P RSLE  KHVT +F +WW TKH TYFEDNRHHLV+S IP  SQP+LPKNRGSN+GGK+I L+E M P     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           HK E  +S  +     P KKAK SGD   G G SA+E+ +V   LSPL+ H +GL+E  SD SLT PH V+SA EEVGTSK  V KP E
Subjt:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]3.9e-9463.45Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEARELIHNG RIQWHANL N+NKHERM D HDS FLQ SYF                IITSYSPYRFGRQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP IT  N L+HWRIC RR TL ELY+P RSLE  KHVT RF +WW TKH  YFEDNRHHLVSSAIPP SQP+LPKNRGSN+GGK+I L+E M P     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSS---LEEPSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           H+ +   S    + P KKAK SGD   G G SA+E+ +V   LSPL+ H +GL+E  SD+SLT PH V+SA EEVGTS+ PV KP E
Subjt:  ---HKREKRSS---LEEPSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

KAA0054204.1 hypothetical protein E6C27_scaffold131G001410 [Cucumis melo var. makuwa]5.3e-9161.64Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEA ELIHNGARIQWHANLQN++KHE M D HDS F+Q SYF                IITSY+PYRFGRQF FYQD+PN I  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP I   N L+HWRICTRR TL ELY+P  SLE  KHVT RF +WW TKH TYFEDNRHHLVSS IPP SQP+LPKNRGSN+GGK+I L+E MTP     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           HK E  +S  +     P KKAK SGD   G G SA+E+ +V   LSPL+ H +G +E  SD+SL  P+ V+SA EEVGTSK PV KP E
Subjt:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.1e-9162.33Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSY----------------FIITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEARELIHNGARIQWHANLQN++KHERM D HDS FLQ SY                +IITSYSPY+F RQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSY----------------FIITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP IT  N L+HWRICTRR TL ELY+P RSLE  KHVT RF +WW TKH TYFEDNRHHLVSSAIPP SQ +LPKNRG N+GGK+I L+E M P     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           HK E  SS  +     P KKA+ SGD     G SA+E+ +V   +SPL+ H +GL+E  SD+SLT PH V+ A EEVGTSK PV KP E
Subjt:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

A0A5A7TX42 Uncharacterized protein1.7e-9563.36Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEARELIHNGARIQWHA+LQN++KHERM D HDS FLQ+SYF                IITSYSPYRFGRQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPTHKRE
         P IT  N L+HWRICTRR TL ELY+P RSLE  KHVT RF +WW TKH TYFEDNRHHLVSSAIPP+SQP+LPKNRGSN+GGK+I L+E M P  + E
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPTHKRE

Query:  KRSSLEE------------PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
         +   +E            P KKAK SGD   G G SA+E+ +V   LSPL+ H +GL+E  SD+SLT PH V+SA EEVGTS+ PV KP E
Subjt:  KRSSLEE------------PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

A0A5A7U8L3 PMD domain-containing protein2.4e-8961.99Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS  GGSIYFGEYEARELIHNGARIQWHANLQN++KHERM D HDS FLQ SYF                IITSYS YRFGRQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP IT  N L+H RICTR  TL ELY+P RSLE  KHVT +F +WW TKH TYFEDNRHHLV+S IP  SQP+LPKNRGSN+GGK+I L+E M P     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           HK E  +S  +     P KKAK SGD   G G SA+E+ +V   LSPL+ H +GL+E  SD SLT PH V+SA EEVGTSK  V KP E
Subjt:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

A0A5A7UGA8 Uncharacterized protein2.5e-9161.64Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEA ELIHNGARIQWHANLQN++KHE M D HDS F+Q SYF                IITSY+PYRFGRQF FYQD+PN I  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP I   N L+HWRICTRR TL ELY+P  SLE  KHVT RF +WW TKH TYFEDNRHHLVSS IPP SQP+LPKNRGSN+GGK+I L+E MTP     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           HK E  +S  +     P KKAK SGD   G G SA+E+ +V   LSPL+ H +G +E  SD+SL  P+ V+SA EEVGTSK PV KP E
Subjt:  ---HKREKRSSLEE-----PSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

A0A5A7UGW6 PMD domain-containing protein1.9e-9463.45Show/hide
Query:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI
        M+NFS EGGSIYFGEYEARELIHNG RIQWHANL N+NKHERM D HDS FLQ SYF                IITSYSPYRFGRQF FYQD+PNDI  +
Subjt:  MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYF----------------IITSYSPYRFGRQFDFYQDIPNDIEDI

Query:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----
        PP IT  N L+HWRIC RR TL ELY+P RSLE  KHVT RF +WW TKH  YFEDNRHHLVSSAIPP SQP+LPKNRGSN+GGK+I L+E M P     
Subjt:  PPEITSRNALHHWRICTRRRTLYELYMPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPT----

Query:  ---HKREKRSS---LEEPSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE
           H+ +   S    + P KKAK SGD   G G SA+E+ +V   LSPL+ H +GL+E  SD+SLT PH V+SA EEVGTS+ PV KP E
Subjt:  ---HKREKRSS---LEEPSKKAKASGDDYCGGGSSAMEISNVQTSLSPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAACTTTTCTAGTGAAGGTGGATCTATTTATTTTGGAGAATATGAGGCGCGAGAACTGATCCACAACGGTGCAAGAATTCAATGGCACGCAAACCTTCAAAACCA
GAATAAACATGAACGTATGTCTGATGCTCACGATTCATTGTTTCTACAGTCCTCCTATTTTATCATAACATCATACAGTCCATATCGATTTGGGCGGCAGTTTGACTTTT
ACCAAGATATCCCTAATGATATAGAAGACATACCACCTGAAATCACGTCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACTTTATATGAGTTATAC
ATGCCTACCCGTTCATTAGAGTCTAGCAAGCATGTGACACCGCGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAG
CAGTGCCATTCCTCCCACATCACAACCCAAACTACCCAAGAACCGAGGAAGTAATATGGGTGGCAAACAGATCCACTTGATTGAGACAATGACTCCTACCCACAAAAGGG
AGAAGCGATCGTCATTGGAAGAACCTTCGAAGAAAGCAAAGGCATCAGGTGATGATTATTGTGGAGGAGGTTCAAGTGCTATGGAAATTTCTAATGTTCAAACATCATTG
TCACCTTTGGACGGTCATTTTCAAGGACTTGTAGAGATATGTAGTGATGACTCTCTGACAGCGCCTCATGTCGTGAATTCAGCCCTTGAAGAGGTTGGTACTTCAAAGGC
ACCAGTTGCCAAACCAGTTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAACTTTTCTAGTGAAGGTGGATCTATTTATTTTGGAGAATATGAGGCGCGAGAACTGATCCACAACGGTGCAAGAATTCAATGGCACGCAAACCTTCAAAACCA
GAATAAACATGAACGTATGTCTGATGCTCACGATTCATTGTTTCTACAGTCCTCCTATTTTATCATAACATCATACAGTCCATATCGATTTGGGCGGCAGTTTGACTTTT
ACCAAGATATCCCTAATGATATAGAAGACATACCACCTGAAATCACGTCGAGGAATGCATTACATCATTGGAGGATATGTACGAGGCGCAGAACTTTATATGAGTTATAC
ATGCCTACCCGTTCATTAGAGTCTAGCAAGCATGTGACACCGCGATTCAAAAATTGGTGGGCCACGAAGCATGAGACCTATTTTGAGGATAATAGACACCATTTGGTGAG
CAGTGCCATTCCTCCCACATCACAACCCAAACTACCCAAGAACCGAGGAAGTAATATGGGTGGCAAACAGATCCACTTGATTGAGACAATGACTCCTACCCACAAAAGGG
AGAAGCGATCGTCATTGGAAGAACCTTCGAAGAAAGCAAAGGCATCAGGTGATGATTATTGTGGAGGAGGTTCAAGTGCTATGGAAATTTCTAATGTTCAAACATCATTG
TCACCTTTGGACGGTCATTTTCAAGGACTTGTAGAGATATGTAGTGATGACTCTCTGACAGCGCCTCATGTCGTGAATTCAGCCCTTGAAGAGGTTGGTACTTCAAAGGC
ACCAGTTGCCAAACCAGTTGAATAA
Protein sequenceShow/hide protein sequence
MSNFSSEGGSIYFGEYEARELIHNGARIQWHANLQNQNKHERMSDAHDSLFLQSSYFIITSYSPYRFGRQFDFYQDIPNDIEDIPPEITSRNALHHWRICTRRRTLYELY
MPTRSLESSKHVTPRFKNWWATKHETYFEDNRHHLVSSAIPPTSQPKLPKNRGSNMGGKQIHLIETMTPTHKREKRSSLEEPSKKAKASGDDYCGGGSSAMEISNVQTSL
SPLDGHFQGLVEICSDDSLTAPHVVNSALEEVGTSKAPVAKPVE