; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018376 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018376
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIB domain-containing protein
Genome locationchr01:879068..881426
RNA-Seq ExpressionPI0018376
SyntenyPI0018376
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136946.1 uncharacterized protein LOC101217337 [Cucumis sativus]2.1e-6292.14Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSS--LKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHN
        MAFLSTFIAV+PSLLVVKPSPTTSS  LKHLNQLPLP+LRFPRTVTFA AS QATAP REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKE+N
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSS--LKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHN

Query:  LQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  LQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_008455019.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis melo]2.0e-6593.71Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTT-----SSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAV+PSLLVVKPSPTT     SSLKHLNQLPLP+LRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVEPSLLVVKPSPTT-----SSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  EHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKKVI CDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  EHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]1.1e-5278.26Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ
        MAF+STF++ EPSLLV + S   SS+KH  QLPLPNLRF RT+TFA ASNQ TA  R+PRGI KPR+ISPE+QALVGAPEISRT+ALKVIW +IKEHNLQ
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ

Query:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+I CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]1.1e-5278.26Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ
        MAF+STF++ EPSLLV + S   SS+KH  QLPLPNLRF RT+TFA ASNQ TA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIW +IKEHNLQ
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ

Query:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KP+DKK+I CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]1.7e-5685.51Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ
        MAFLSTFI+ EPSLLVVK S T +S+K   QLPLPNLRF RTVTFA ASNQATA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIWA+IKEHNLQ
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ

Query:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVI CDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A0A0K2G6 Brg-1 associated factor9.9e-6392.14Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSS--LKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHN
        MAFLSTFIAV+PSLLVVKPSPTTSS  LKHLNQLPLP+LRFPRTVTFA AS QATAP REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKE+N
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSS--LKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHN

Query:  LQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        LQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  LQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A1S3C0N2 SWI/SNF complex component SNF12 homolog9.6e-6693.71Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTT-----SSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAV+PSLLVVKPSPTT     SSLKHLNQLPLP+LRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVEPSLLVVKPSPTT-----SSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  EHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKKVI CDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  EHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1GL33 uncharacterized protein LOC1114552445.5e-5378.26Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ
        MAF+STF++ EPSLLV + S   SS+KH  QLPLPNLRF RT+TFA ASNQ TA  R+PRGI KPR+ISPE+QALVGAPEISRT+ALKVIW +IKEHNLQ
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ

Query:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+I CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710829.3e-5378.99Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ
        MAF+STF++ E SLL+ + S   SS+KH  QLPLPNLRF RT+TFA ASNQATA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIWA+IKEHNLQ
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ

Query:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKK+I CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861976.0e-5278.99Show/hide
Query:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ
        MAF+STFI+ E SLL V+ S T+SS+KH  Q P  NL F RTVTFA  SNQATA +R+PRGI KP++ISPE+QALVG PEISRTQALKVIWA+IKEHNLQ
Subjt:  MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQ

Query:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        KPSDKKVI CDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  KPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

SwissProt top hitse value%identityAlignment
O02101 SWI/SNF chromatin-remodeling accessory subunit 27.0e-0533.33Show/hide
Query:  KISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEI
        K+ P L  ++G    +R + ++ +W YIK H LQ P ++ +I CD  L   F G + + F+E+
Subjt:  KISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEI

O74503 Upstream activation factor subunit spp272.9e-1149.12Show/hide
Query:  ITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIF
        + KP K+SP+L   +G  ++SR Q +K +W YIK H+LQ P+DK+ I CD+KLK++F
Subjt:  ITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIF

Q05024 Protein TRI11.1e-1053.7Show/hide
Query:  ISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGK
        +S  LQ  +G+ E+ RTQ +K+IW YIKEH+LQ P D++ I CDEK++ IFG K
Subjt:  ISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGK

Q08747 Upstream activation factor subunit UAF303.6e-0949.12Show/hide
Query:  TKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFG
        T+   +S  L +L+G  E++RT+ ++ +WAYIK HNLQ P++KK I CDEKL+ I G
Subjt:  TKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFG

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein2.1e-2048.45Show/hide
Query:  RTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHF
        RT+    A+ +A     E +GI K R +S +L +  G  E++R  ALK +W Y+K HNLQ P++KK I CD+KLK IF GKD+VG  EI  L+SPHF
Subjt:  RTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHF

AT2G14880.1 SWIB/MDM2 domain superfamily protein3.1e-3256.3Show/hide
Query:  STFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAP-RREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPS
        STF+ ++ +     PS   SSL+  +  P   LR  R VT A  S++ TA  +R PRGI KPR +SPE+Q +V  PEI+RTQALK IWAYIKEH+LQ P 
Subjt:  STFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAP-RREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPS

Query:  DKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        +K+ I CDEKLK IF G+D VGFLEIA LI PHFL
Subjt:  DKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein1.9e-1851.11Show/hide
Query:  ASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHF
        AS+      R+  GI K   +S  L   +G  E+SRT A+K IW YIK +NLQ P +K+ I CDE+LK IF GKD VGFLEI+ L+S HF
Subjt:  ASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHF

AT3G03590.1 SWIB/MDM2 domain superfamily protein3.5e-2044.88Show/hide
Query:  LVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAP-RREPR--GITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCD
        L+   S  TSSL        P  + P+         ++ +P ++ PR  GI K   +SP L   +G  E SRT A+K IW YIK H+LQ P+DK+ I CD
Subjt:  LVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAP-RREPR--GITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITCD

Query:  EKLKNIFGGKDEVGFLEIAGLISPHFL
        E LK IF GKD+VGFLEI+ L+SPHF+
Subjt:  EKLKNIFGGKDEVGFLEIAGLISPHFL

AT4G34290.1 SWIB/MDM2 domain superfamily protein1.7e-3053.96Show/hide
Query:  FLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQ---ATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNL
        F +TF+ V+ + L  + S  + S   L+     NLR  R VT A A++     T   REPRGI KPR +S  +Q +VG PEI RTQALK IWAYIKEH+L
Subjt:  FLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQ---ATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNL

Query:  QKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        Q P +K+ I CDEKLK IF GK+ VGFLEIA LI PHFL
Subjt:  QKPSDKKVITCDEKLKNIFGGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCCTCTCCACCTTCATCGCCGTCGAACCTTCGCTCCTCGTCGTCAAACCCTCCCCCACCACCTCCTCCCTCAAGCATCTCAATCAACTCCCTCTCCCTAATTT
GCGCTTCCCCCGCACTGTTACCTTCGCTTTTGCTTCCAACCAGGCCACTGCCCCCCGCCGGGAGCCCCGTGGCATCACGAAGCCCAGGAAAATTTCACCGGAGTTGCAAG
CGCTTGTCGGCGCTCCTGAGATTTCCCGTACCCAAGCCCTTAAGGTCATTTGGGCTTACATTAAAGAACATAATCTTCAGAAACCAAGCGACAAGAAAGTCATAACATGC
GACGAGAAACTGAAGAACATATTTGGAGGGAAAGATGAAGTTGGATTTCTGGAGATTGCAGGTTTAATAAGTCCACACTTTCTATAA
mRNA sequenceShow/hide mRNA sequence
CGCGCGTTCAGAAATTCGAGCTTCTCGAGTTATCGCTCTTACCGCTTCACCTTCTTCGCTTTATCCATTTTTTGAGAACAACCTTTCGTCACTCACTTCCGGCCATGGCT
TTCCTCTCCACCTTCATCGCCGTCGAACCTTCGCTCCTCGTCGTCAAACCCTCCCCCACCACCTCCTCCCTCAAGCATCTCAATCAACTCCCTCTCCCTAATTTGCGCTT
CCCCCGCACTGTTACCTTCGCTTTTGCTTCCAACCAGGCCACTGCCCCCCGCCGGGAGCCCCGTGGCATCACGAAGCCCAGGAAAATTTCACCGGAGTTGCAAGCGCTTG
TCGGCGCTCCTGAGATTTCCCGTACCCAAGCCCTTAAGGTCATTTGGGCTTACATTAAAGAACATAATCTTCAGAAACCAAGCGACAAGAAAGTCATAACATGCGACGAG
AAACTGAAGAACATATTTGGAGGGAAAGATGAAGTTGGATTTCTGGAGATTGCAGGTTTAATAAGTCCACACTTTCTATAATTATTTAAAGTATGGAAGATAGCCATAAT
GGACTTTCTTTTCAGTCCATGAAGATGAACTTTTTTTTTGTTTGTTGTGGGAGTCTCTCAACTCAGGTATTGCTCACTGAATCCTGTAGTTCAGAGCCCACCTTATGATT
AGTAGTTAAATAGAGAGAAAGAAAGCTTTTGTAAGAAGAACTATGTTTGGTGGTTTTATGTAGAGATTGTTATATGAAAATCTCTTTTAGTTATTAGTTTTTGGGTATAA
TGTTTCACTTTTGTATTATTCTACATGCTTGCTTTTTTGTGCTTCCATTTGCTATGGTCTTGATGATTTAGTTGCTAATGGAACTGTGTGATTTTAACACTATTTGTCTT
CTTAAATACTAGTTTATATGCAAGTACAAATTCAAATAAATATTGTATTTAAGCATTGTGATTTTATTATTATTATTTTTTAAAGAAGTAAAGTTTGGCTCAGAACATGT
TATACATCTTAGGGTTGCAAACACAATGTCAGGGTTATAATCAAGGTTAAAATGTTGACCTTGTTGAGGTTTGAATTTTAGGGAAAAGTTAGAAATATTGGTAAAATGTC
TTATGTAGAAG
Protein sequenceShow/hide protein sequence
MAFLSTFIAVEPSLLVVKPSPTTSSLKHLNQLPLPNLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKEHNLQKPSDKKVITC
DEKLKNIFGGKDEVGFLEIAGLISPHFL