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PI0018377 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018377
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAT-hook motif nuclear-localized protein 20-like
Genome locationchr06:3503888..3504386
RNA-Seq ExpressionPI0018377
SyntenyPI0018377
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049279.1 hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa]2.9e-3987.63Show/hide
Query:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        MSDAERKTA  APTRLQSQAPASIEIKRV +WNV IPLLSPLVS SSCGNSGPE+VL MA+NNAR+E KGLTFTKWQHPAAPFYYEPVPRAN FVPV
Subjt:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV

KAE8650334.1 hypothetical protein Csa_009641 [Cucumis sativus]2.6e-4089.8Show/hide
Query:  MSDAERKTA-TLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        MSDAERKTA T+APTRLQSQAPASIEIKR  NWNVAIPLLSPLVS SSCGNS PE++L MAENNAR+ETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
Subjt:  MSDAERKTA-TLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV

KAG6582368.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia]6.1e-2162.89Show/hide
Query:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        M+ +ER+     PTRLQSQAPASI I R  NWNVAIPLL+PLVSAS CGNS  ++VLLM EN AR+E      TKWQHPA P Y  P+P   PFVPV
Subjt:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV

XP_022924297.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata]2.1e-2167.82Show/hide
Query:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEP
        M+ +ER+     PTRLQSQAPASI I R  NWNVAIPLL+PLVSAS CGNS  ++VLLM EN AR+ETKGL  TKWQHPA PF   P
Subjt:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEP

XP_023526926.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo]9.5e-2268.97Show/hide
Query:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEP
        M+ +ER+     PTRLQSQAPASI I R  NWNVAIPLL+PLVSAS CGNS  ++VLL AEN AR+ETKGLT TKWQHPA PF   P
Subjt:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEP

TrEMBL top hitse value%identityAlignment
A0A0A0L8D3 Uncharacterized protein1.3e-4089.8Show/hide
Query:  MSDAERKTA-TLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        MSDAERKTA T+APTRLQSQAPASIEIKR  NWNVAIPLLSPLVS SSCGNS PE++L MAENNAR+ETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
Subjt:  MSDAERKTA-TLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV

A0A2P5A713 Uncharacterized protein3.2e-1552.69Show/hide
Query:  PTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKE--------TKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        P+RLQ +APAS++I  V +WNVAIPLLSPL S S    S P+ +   AEN +R++         K + F KWQHPAAPF YEP P   PFVPV
Subjt:  PTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKE--------TKGLTFTKWQHPAAPFYYEPVPRANPFVPV

A0A5D3D1A6 Uncharacterized protein1.4e-3987.63Show/hide
Query:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        MSDAERKTA  APTRLQSQAPASIEIKRV +WNV IPLLSPLVS SSCGNSGPE+VL MA+NNAR+E KGLTFTKWQHPAAPFYYEPVPRAN FVPV
Subjt:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV

A0A6J1CRZ0 uncharacterized protein At4g14450, chloroplastic-like2.6e-1755.66Show/hide
Query:  MSDAERKTA----TLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEV-LLMAENNARKET----KGLTFTKWQHPAAPFYYEPVPRA
        M DAER+ A    +   TRLQ +AP+SI+I R  +WNVAIPLLSPLVS         E+V +LM EN AR+E     K  TFT+W+HPAAPFYY PV R 
Subjt:  MSDAERKTA----TLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEV-LLMAENNARKET----KGLTFTKWQHPAAPFYYEPVPRA

Query:  NPFVPV
         PFVPV
Subjt:  NPFVPV

A0A6J1E8H9 AT-hook motif nuclear-localized protein 20-like1.0e-2167.82Show/hide
Query:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEP
        M+ +ER+     PTRLQSQAPASI I R  NWNVAIPLL+PLVSAS CGNS  ++VLLM EN AR+ETKGL  TKWQHPA PF   P
Subjt:  MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEP

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic1.4e-0743.18Show/hide
Query:  TRLQSQAPA-SIEIKRVPNWNVAIPLLSPLVSA--SSCGNSGPEEVLLMAENNARKETKGL-TFTKWQHPAAPFYYEPVPRANPFVPV
        ++LQ +AP+  I+     NWNVAIPLLSPL  +  SS   S         E    +E K    F KWQHPA+PF YEP     PF+ V
Subjt:  TRLQSQAPA-SIEIKRVPNWNVAIPLLSPLVSA--SSCGNSGPEEVLLMAENNARKETKGL-TFTKWQHPAAPFYYEPVPRANPFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein1.0e-1047.62Show/hide
Query:  TRLQSQAPASIEIKRV-PNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKET-KGLTFTKWQHPAAPFYYEPVPRAN-PF
        +RLQ +AP  ++I     NW VAIPLLSP  S        P  V+   E    KE  K   F KWQHPAAPFYY+P P +N PF
Subjt:  TRLQSQAPASIEIKRV-PNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKET-KGLTFTKWQHPAAPFYYEPVPRAN-PF

AT3G23170.1 unknown protein3.0e-1045.56Show/hide
Query:  PTRLQSQAPASIEIKRVP---NWNVAIPLLSPLVSA--SSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV
        P+RL  + PA   +   P   NWN AIPLLSPL  +  SS  +  P E     ++ A    K   F KWQHPAAPFYYE      PFVPV
Subjt:  PTRLQSQAPASIEIKRVP---NWNVAIPLLSPLVSA--SSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV

AT4G14450.1 unknown protein9.8e-0943.18Show/hide
Query:  TRLQSQAPA-SIEIKRVPNWNVAIPLLSPLVSA--SSCGNSGPEEVLLMAENNARKETKGL-TFTKWQHPAAPFYYEPVPRANPFVPV
        ++LQ +AP+  I+     NWNVAIPLLSPL  +  SS   S         E    +E K    F KWQHPA+PF YEP     PF+ V
Subjt:  TRLQSQAPA-SIEIKRVPNWNVAIPLLSPLVSA--SSCGNSGPEEVLLMAENNARKETKGL-TFTKWQHPAAPFYYEPVPRANPFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGATGCAGAGAGAAAAACTGCCACCCTTGCGCCCACGAGGCTGCAGAGCCAGGCTCCAGCATCGATCGAGATAAAGCGGGTACCGAATTGGAACGTGGCTATACC
ATTATTATCCCCTCTTGTATCAGCTTCGTCTTGTGGGAATTCAGGGCCAGAAGAAGTGTTGTTAATGGCTGAGAATAATGCGAGGAAGGAAACCAAAGGGCTAACCTTTA
CTAAATGGCAGCACCCTGCGGCTCCGTTTTATTATGAACCTGTCCCAAGAGCTAACCCCTTTGTGCCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
CTAAACTTCTTCAACTCTTCTGTTTACCCACTTTGATCTACACAAAAGAGAAGAAATGTCCGATGCAGAGAGAAAAACTGCCACCCTTGCGCCCACGAGGCTGCAGAGCC
AGGCTCCAGCATCGATCGAGATAAAGCGGGTACCGAATTGGAACGTGGCTATACCATTATTATCCCCTCTTGTATCAGCTTCGTCTTGTGGGAATTCAGGGCCAGAAGAA
GTGTTGTTAATGGCTGAGAATAATGCGAGGAAGGAAACCAAAGGGCTAACCTTTACTAAATGGCAGCACCCTGCGGCTCCGTTTTATTATGAACCTGTCCCAAGAGCTAA
CCCCTTTGTGCCTGTGTGAATATTTCTTTTCTTCTTTTTTAACAATTATTGTTCTGCTTAATCCATGGAACAATTTGTATGTATAAAGTTACATGAGATTGAATCTTTCA
TCTCATAATTGTACACAATCTTCTTTTTTTCATATATTTATTTAAGCTCATTTTATTAA
Protein sequenceShow/hide protein sequence
MSDAERKTATLAPTRLQSQAPASIEIKRVPNWNVAIPLLSPLVSASSCGNSGPEEVLLMAENNARKETKGLTFTKWQHPAAPFYYEPVPRANPFVPV