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PI0018392 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018392
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiontranscriptional corepressor LEUNIG_HOMOLOG-like isoform X2
Genome locationchr05:1003288..1005537
RNA-Seq ExpressionPI0018392
SyntenyPI0018392
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006594 - LIS1 homology motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043358.1 transcriptional corepressor LEUNIG-like isoform X3 [Cucumis melo var. makuwa]1.2e-0441.46Show/hide
Query:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

TYK00063.1 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa]1.2e-0441.46Show/hide
Query:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

XP_016903010.1 PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Cucumis melo]3.2e-0541.67Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        D RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

XP_016903012.1 PREDICTED: transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo]3.2e-0541.67Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        D RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

XP_016903013.1 PREDICTED: transcriptional corepressor LEUNIG-like isoform X3 [Cucumis melo]3.6e-0440.74Show/hide
Query:  LDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        LD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  LDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

TrEMBL top hitse value%identityAlignment
A0A0A0LTZ0 Uncharacterized protein1.7e-0440.74Show/hide
Query:  LDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        LD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  LDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

A0A1S4E464 transcriptional corepressor LEUNIG_HOMOLOG-like isoform X21.6e-0541.67Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        D RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

A0A1S4E4W4 transcriptional corepressor LEUNIG-like isoform X11.6e-0541.67Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        D RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

A0A5A7TKL9 Transcriptional corepressor LEUNIG-like isoform X35.9e-0541.46Show/hide
Query:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

A0A5D3BJX2 Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X25.9e-0541.46Show/hide
Query:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL
        RLD YIY +LLKRKL ++AR F  E +  +L++    D P  FL  WW  FW  F +R NP + ++  T+ + +QL    DL
Subjt:  RLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDL

SwissProt top hitse value%identityAlignment
O48847 Transcriptional corepressor LEUNIG_HOMOLOG1.7e-0440.32Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YIY +L+K+KL++TA+ F  E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN

Q9FUY2 Transcriptional corepressor LEUNIG8.2e-0438.71Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YI+ +L+KR L +TA+ F+ E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN

Arabidopsis top hitse value%identityAlignment
AT2G32700.1 LEUNIG_homolog1.2e-0540.32Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YIY +L+K+KL++TA+ F  E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN

AT2G32700.2 LEUNIG_homolog1.2e-0540.32Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YIY +L+K+KL++TA+ F  E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN

AT2G32700.3 LEUNIG_homolog1.2e-0540.32Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YIY +L+K+KL++TA+ F  E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN

AT2G32700.4 LEUNIG_homolog1.2e-0540.32Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YIY +L+K+KL++TA+ F  E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN

AT2G32700.5 LEUNIG_homolog1.2e-0540.32Show/hide
Query:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN
        D  LD YIY +L+K+KL++TA+ F  E +  +  +    D P  FL  WW  FW  F +R N
Subjt:  DGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAGGTTGGATGGTTACATATACCAACACCTTCTCAAAAGGAAGTTGAATTCAACTGCAAGATTATTTAGGATGGAGAACCGAGACGCTCTACTACAAGAATT
TAATAATGATGATCAGCCTACTAGTTTTCTTCAGATGTGGTGGCTTACCTTTTGGGGCACTTTTTCTTCAAGGAATAATCCTAATAATTTAAACCAACCACTTACTAATT
CTCTATCAAATCAGTTGGCTCCAACACAAGATTTGATTGCAAAGTTCCCCTCTGATGCTACAGAATTTATAAGAGCAAAAGTAAAGAAGTATTTTGATGATGGACGTATC
TCAAGGGACTTCCTTAAACTATTAGGGGAAGAAGATAATTCATTCAAGACTCTATTAAAGCACTCAACTCCCAACTTAGAAGAGTTTCAGAAGTTGAATGATGACGACGA
TGATAATCAAGACTCCCTTTATTTCAACCAAGAAGAAATGCTCAAACTACTTGACGAGGAACCATACGAAGAAGCGATTAAACTATATAATTCAGAACGAGGGAAGAACC
TGTTGGCAGCCATTGATGAAGAGAAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAGGTTGGATGGTTACATATACCAACACCTTCTCAAAAGGAAGTTGAATTCAACTGCAAGATTATTTAGGATGGAGAACCGAGACGCTCTACTACAAGAATT
TAATAATGATGATCAGCCTACTAGTTTTCTTCAGATGTGGTGGCTTACCTTTTGGGGCACTTTTTCTTCAAGGAATAATCCTAATAATTTAAACCAACCACTTACTAATT
CTCTATCAAATCAGTTGGCTCCAACACAAGATTTGATTGCAAAGTTCCCCTCTGATGCTACAGAATTTATAAGAGCAAAAGTAAAGAAGTATTTTGATGATGGACGTATC
TCAAGGGACTTCCTTAAACTATTAGGGGAAGAAGATAATTCATTCAAGACTCTATTAAAGCACTCAACTCCCAACTTAGAAGAGTTTCAGAAGTTGAATGATGACGACGA
TGATAATCAAGACTCCCTTTATTTCAACCAAGAAGAAATGCTCAAACTACTTGACGAGGAACCATACGAAGAAGCGATTAAACTATATAATTCAGAACGAGGGAAGAACC
TGTTGGCAGCCATTGATGAAGAGAAGGACTGA
Protein sequenceShow/hide protein sequence
MDGRLDGYIYQHLLKRKLNSTARLFRMENRDALLQEFNNDDQPTSFLQMWWLTFWGTFSSRNNPNNLNQPLTNSLSNQLAPTQDLIAKFPSDATEFIRAKVKKYFDDGRI
SRDFLKLLGEEDNSFKTLLKHSTPNLEEFQKLNDDDDDNQDSLYFNQEEMLKLLDEEPYEEAIKLYNSERGKNLLAAIDEEKD