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PI0018424 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018424
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr09:11383821..11384916
RNA-Seq ExpressionPI0018424
SyntenyPI0018424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]2.6e-1770.15Show/hide
Query:  NNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG
        NNQNNPA QN +EQ+PAYLA+DLD PI+SY SPNLYDFNP I Y  FG+N  FEIK +ML + QNAG
Subjt:  NNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG

KAA0060833.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]5.6e-2057.43Show/hide
Query:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI
        MSEGEQP+F ++ EIER F+RNR+ R+R  R N  N+QNNQ  PANQ  +  +  YLA++ D PIRS  SPNLY FNP I YP FG+N RF+IK VML +
Subjt:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI

Query:  I
        +
Subjt:  I

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]6.2e-1974.65Show/hide
Query:  MNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG
        MNNQNNQ  PANQ A+  +P YLA D D PIRSY SPNLYDFNP I YPTF +N RFEIK VMLQIIQNAG
Subjt:  MNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG

TYK08803.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]5.6e-2057.43Show/hide
Query:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI
        MSEGEQP+F ++ EIER F+RNR+ R+R  R N  N+QNNQ  PANQ  +  +  YLA++ D PIRS  SPNLY FNP I YP FG+N RF+IK VML +
Subjt:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI

Query:  I
        +
Subjt:  I

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]4.6e-1450.47Show/hide
Query:  MSEGEQPEFRLNPEIERTFR----RNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSV
        MS    PEF  NPEI+ TFR    +NR  R+R+N A+N NN+  + N    N   Q P +LA D + PIR+Y +PNLYDF+P I+ P   +NARFEIK V
Subjt:  MSEGEQPEFRLNPEIERTFR----RNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSV

Query:  MLQIIQN
        M+Q+IQN
Subjt:  MLQIIQN

TrEMBL top hitse value%identityAlignment
A0A5A7U2F0 Uncharacterized protein3.9e-1164.41Show/hide
Query:  RANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNA
        R N + NQNN+    NQNA+EQ+P YLA+ +D PIRSY S NLYDFNP ITYPTFG+N+
Subjt:  RANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNA

A0A5A7UDN8 Uncharacterized protein1.3e-1770.15Show/hide
Query:  NNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG
        NNQNNPA QN +EQ+PAYLA+DLD PI+SY SPNLYDFNP I Y  FG+N  FEIK +ML + QNAG
Subjt:  NNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG

A0A5A7UXZ2 Retrovirus-related Pol polyprotein from transposon 17.62.7e-2057.43Show/hide
Query:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI
        MSEGEQP+F ++ EIER F+RNR+ R+R  R N  N+QNNQ  PANQ  +  +  YLA++ D PIRS  SPNLY FNP I YP FG+N RF+IK VML +
Subjt:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI

Query:  I
        +
Subjt:  I

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.0e-1974.65Show/hide
Query:  MNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG
        MNNQNNQ  PANQ A+  +P YLA D D PIRSY SPNLYDFNP I YPTF +N RFEIK VMLQIIQNAG
Subjt:  MNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQIIQNAG

A0A5D3CAB5 Retrovirus-related Pol polyprotein from transposon 17.62.7e-2057.43Show/hide
Query:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI
        MSEGEQP+F ++ EIER F+RNR+ R+R  R N  N+QNNQ  PANQ  +  +  YLA++ D PIRS  SPNLY FNP I YP FG+N RF+IK VML +
Subjt:  MSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNPSITYPTFGKNARFEIKSVMLQI

Query:  I
        +
Subjt:  I

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGATGACCATACGTGTGGCGAAGGCACCGAGAGAAGTTCTGTTTTCAGCTGAATCGTGTGCTTTCGCCGAAGAGTACGCAAGCAAGTTTATGAGTGAAGGTGA
ACAACCAGAATTCAGACTCAACCCTGAAATAGAGCGAACCTTTCGGAGGAATAGAAAAGCAAGGCAGAGGTTAAACAGAGCCAACAACATGAATAACCAAAACAACCAAA
ATAACCCTGCCAACCAAAATGCCAAAGAACAAAGCCCTGCCTACTTAGCCTACGATTTGGATGGACCTATAAGGTCATACGTTTCACCAAACTTGTATGATTTTAACCCT
AGTATCACCTACCCCACGTTTGGCAAGAACGCTCGGTTTGAAATCAAGTCTGTCATGCTCCAGATAATACAAAATGCGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGATGACCATACGTGTGGCGAAGGCACCGAGAGAAGTTCTGTTTTCAGCTGAATCGTGTGCTTTCGCCGAAGAGTACGCAAGCAAGTTTATGAGTGAAGGTGA
ACAACCAGAATTCAGACTCAACCCTGAAATAGAGCGAACCTTTCGGAGGAATAGAAAAGCAAGGCAGAGGTTAAACAGAGCCAACAACATGAATAACCAAAACAACCAAA
ATAACCCTGCCAACCAAAATGCCAAAGAACAAAGCCCTGCCTACTTAGCCTACGATTTGGATGGACCTATAAGGTCATACGTTTCACCAAACTTGTATGATTTTAACCCT
AGTATCACCTACCCCACGTTTGGCAAGAACGCTCGGTTTGAAATCAAGTCTGTCATGCTCCAGATAATACAAAATGCGGGATAA
Protein sequenceShow/hide protein sequence
MAEMTIRVAKAPREVLFSAESCAFAEEYASKFMSEGEQPEFRLNPEIERTFRRNRKARQRLNRANNMNNQNNQNNPANQNAKEQSPAYLAYDLDGPIRSYVSPNLYDFNP
SITYPTFGKNARFEIKSVMLQIIQNAG