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PI0018425 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018425
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr11:15769427..15769801
RNA-Seq ExpressionPI0018425
SyntenyPI0018425
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.5e-1141.82Show/hide
Query:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK
        V++S K  LE+++DDPL K KQ   ED  +TR PSPPKQ      ++ +  +   ++ DDD  Y+KF ++ + +P+  G ED+FQ QA LQE  ++ +K 
Subjt:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK

Query:  IMDLELKIDN
        + DLELK D+
Subjt:  IMDLELKIDN

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]2.3e-1256.79Show/hide
Query:  GETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKKIMDLELKIDN---HHQ
        GET AP P KQ  +Q  +  GE+ ++D Y+KF  DT GKP+MDG +D+FQ Q  LQE T R+EK+I DLELKIDN   HHQ
Subjt:  GETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKKIMDLELKIDN---HHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]3.1e-0946.51Show/hide
Query:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDDYYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEK
        K+ LE+ VDDPL KGK    +   ET  PSPPK+   Q       ++ D+Y+KF  +  GKPM DG ED+FQ QA  QE  +R EK
Subjt:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDDYYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEK

TYK23898.1 gag-pol [Cucumis melo var. makuwa]1.3e-1260Show/hide
Query:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQE
        K   EE VDD L KGKQ A+ED GE   PSP KQ  +Q  + T E+ D+D Y+KF SDT GKPMMD LEDIFQ Q+ LQE
Subjt:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.5e-1141.82Show/hide
Query:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK
        V++S K  LE+++DDPL K KQ   ED  +TR PSPPKQ      ++ +  +   ++ DDD  Y+KF ++ + +P+  G ED+FQ QA LQE  ++ +K 
Subjt:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK

Query:  IMDLELKIDN
        + DLELK D+
Subjt:  IMDLELKIDN

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein7.2e-1241.82Show/hide
Query:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK
        V++S K  LE+++DDPL K KQ   ED  +TR PSPPKQ      ++ +  +   ++ DDD  Y+KF ++ + +P+  G ED+FQ QA LQE  ++ +K 
Subjt:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK

Query:  IMDLELKIDN
        + DLELK D+
Subjt:  IMDLELKIDN

A0A5A7U0L9 Uncharacterized protein1.1e-1256.79Show/hide
Query:  GETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKKIMDLELKIDN---HHQ
        GET AP P KQ  +Q  +  GE+ ++D Y+KF  DT GKP+MDG +D+FQ Q  LQE T R+EK+I DLELKIDN   HHQ
Subjt:  GETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKKIMDLELKIDN---HHQ

A0A5D3D8Q5 Uncharacterized protein1.5e-0946.51Show/hide
Query:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDDYYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEK
        K+ LE+ VDDPL KGK    +   ET  PSPPK+   Q       ++ D+Y+KF  +  GKPM DG ED+FQ QA  QE  +R EK
Subjt:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDDYYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEK

A0A5D3DK59 Gag-pol6.5e-1360Show/hide
Query:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQE
        K   EE VDD L KGKQ A+ED GE   PSP KQ  +Q  + T E+ D+D Y+KF SDT GKPMMD LEDIFQ Q+ LQE
Subjt:  KKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDD-YYKFNSDTIGKPMMDGLEDIFQTQAYLQE

A0A5D3E1H0 Uncharacterized protein7.2e-1241.82Show/hide
Query:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK
        V++S K  LE+++DDPL K KQ   ED  +TR PSPPKQ      ++ +  +   ++ DDD  Y+KF ++ + +P+  G ED+FQ QA LQE  ++ +K 
Subjt:  VLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQ------KEDQSSDVTGENKDDD--YYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKK

Query:  IMDLELKIDN
        + DLELK D+
Subjt:  IMDLELKIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCCTACTTCGTGTTGGTCAGTGTGAAAAAGTTCTTGGAGGAGTCTGTTGATGACCCACTCCCCAAAGGAAAACAAAACGCCTTTGAGGACACAGGTGAGACACG
TGCTCCCTCACCACCTAAACAAAAAGAAGATCAATCAAGTGACGTGACGGGCGAAAATAAGGATGATGATTACTACAAATTCAACAGCGATACAATTGGAAAACCAATGA
TGGATGGACTCGAAGATATTTTCCAAACACAAGCATATTTGCAAGAACGAACGATGAGGTATGAGAAGAAGATTATGGACTTGGAGTTAAAGATCGATAATCACCATCAA
GTGCAACATGATCAACTTGCCTTTAAAATTGCGAGGCGATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATCCTACTTCGTGTTGGTCAGTGTGAAAAAGTTCTTGGAGGAGTCTGTTGATGACCCACTCCCCAAAGGAAAACAAAACGCCTTTGAGGACACAGGTGAGACACG
TGCTCCCTCACCACCTAAACAAAAAGAAGATCAATCAAGTGACGTGACGGGCGAAAATAAGGATGATGATTACTACAAATTCAACAGCGATACAATTGGAAAACCAATGA
TGGATGGACTCGAAGATATTTTCCAAACACAAGCATATTTGCAAGAACGAACGATGAGGTATGAGAAGAAGATTATGGACTTGGAGTTAAAGATCGATAATCACCATCAA
GTGCAACATGATCAACTTGCCTTTAAAATTGCGAGGCGATGGTGA
Protein sequenceShow/hide protein sequence
MLSYFVLVSVKKFLEESVDDPLPKGKQNAFEDTGETRAPSPPKQKEDQSSDVTGENKDDDYYKFNSDTIGKPMMDGLEDIFQTQAYLQERTMRYEKKIMDLELKIDNHHQ
VQHDQLAFKIARRW