CuGenDBv2

Gene ID	PI0018466
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	C3H1-type domain-containing protein
Genome location	chr02:9057607..9082630
RNA-Seq Expression	PI0018466
Synteny	PI0018466
Gene Ontology terms	GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000571 - Zinc finger, CCCH-type IPR036855 - Zinc finger, CCCH-type superfamily IPR045072 - MKRN-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6588269.1 Zinc finger CCCH domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia]

1.4e-118

78.32

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD
        MHYKK+PCR+FQRGSCQYGERCKFLH TQQP               QQQKPNPFGFGV + GQSKA  D GSKQNQYK ++NKWTR ST TGNA SRKPD
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD

Query:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN
        N   S+NH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLLNSKLAEFE LL KPYVTP N
Subjt:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN

Query:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        RA GNQSS SGTNS S  PS+QN+  PSLSSFSQLGASLNTGFGARPSNPPN  FGQ VQFSS  +NSS FG TNFPST+  AVGG
Subjt:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

XP_008443667.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1 [Cucumis melo]

3.1e-145

95.93

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Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES
        MHYKKQ CR+FQRGSCQYGE CKFLHATQQ  QQKPNPFGFGVPNNGQSKAVADFGSKQNQ+KPFENKWTRPST TGNAQSRKPDNHLPSSNHKCTDGES
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES

Query:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP
        CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLL KPYVTPSNRAPGNQSSFSGTNSP
Subjt:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP

Query:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        S LPSAQNNTPSLSSFSQLGASLNTGFGARPSN PNTVFGQQ QFSSPVQNSSGFGMTNFPSTSVVAVGG
Subjt:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

XP_008443668.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2 [Cucumis melo]

1.2e-144

95.91

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES
        MHYKKQ CR+FQRGSCQYGE CKFLHATQQ  QQKPNPFGFGVPNNGQSKAVADFGSKQNQ+KPFENKWTRPST TGNAQSRKPDNHLPSSNHKCTDGES
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES

Query:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP
        CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLL KPYVTPSNRAPGNQSSFSGTNSP
Subjt:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP

Query:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVG
        S LPSAQNNTPSLSSFSQLGASLNTGFGARPSN PNTVFGQQ QFSSPVQNSSGFGMTNFPSTSVVAVG
Subjt:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVG

XP_011660211.1 zinc finger CCCH domain-containing protein 16 [Cucumis sativus]

1.0e-148

97.78

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Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES
        MHYKKQPCRDFQRG+CQYGERCKFLHATQQ QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPST TGNAQSRKPDNHLPSSNHKCTDGES
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES

Query:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP
        CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLL KPYVTPSNRAPGNQSSFSGTNSP
Subjt:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP

Query:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        S LPSAQNNTPSLSSFSQLGASLNTGFGARPSNP NTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
Subjt:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

XP_023005674.1 zinc finger CCCH domain-containing protein 16 isoform X1 [Cucurbita maxima]

4.9e-119

78.67

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Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD
        MHYKK+PCR+FQRGSCQYGERCKFLH TQQP               QQQKPNPFGFGV ++GQSKA  D GSKQNQYK +ENKWTR ST TGNA SRKPD
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD

Query:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN
        N   S+NH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLLNSKLAEFE LL KPYVTP N
Subjt:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN

Query:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        RA GNQSS SGTNS S  PS+QN+  PSLSSFSQLGASLNTGFGARPSNPPN  FGQ VQFSS  +NSS FG TNFPST+  AVGG
Subjt:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B837 zinc finger CCCH domain-containing protein 16 isoform X2

5.7e-145

95.91

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES
        MHYKKQ CR+FQRGSCQYGE CKFLHATQQ  QQKPNPFGFGVPNNGQSKAVADFGSKQNQ+KPFENKWTRPST TGNAQSRKPDNHLPSSNHKCTDGES
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES

Query:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP
        CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLL KPYVTPSNRAPGNQSSFSGTNSP
Subjt:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP

Query:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVG
        S LPSAQNNTPSLSSFSQLGASLNTGFGARPSN PNTVFGQQ QFSSPVQNSSGFGMTNFPSTSVVAVG
Subjt:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVG

A0A1S3B9C9 zinc finger CCCH domain-containing protein 16 isoform X1

1.5e-145

95.93

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES
        MHYKKQ CR+FQRGSCQYGE CKFLHATQQ  QQKPNPFGFGVPNNGQSKAVADFGSKQNQ+KPFENKWTRPST TGNAQSRKPDNHLPSSNHKCTDGES
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGES

Query:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP
        CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLL KPYVTPSNRAPGNQSSFSGTNSP
Subjt:  CKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSP

Query:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        S LPSAQNNTPSLSSFSQLGASLNTGFGARPSN PNTVFGQQ QFSSPVQNSSGFGMTNFPSTSVVAVGG
Subjt:  STLPSAQNNTPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

A0A6J1CTC5 zinc finger CCCH domain-containing protein 16

2.6e-118

77.27

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQ---------------QQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD
        M YKK  CR+FQRGSC+YGERC+++HATQQPQ               QQKPNPFGFGV + GQSKA ADFGSKQNQYKPFENKWTR ST +GNA S+K D
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQ---------------QQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD

Query:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN
        N  PS+NHKCTDGESCK QI EDFQNERPLWKLTCYGH+K+EPCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLLNSKLAEF+ LL KPYVTP N
Subjt:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN

Query:  RAPGNQSSFSGTNSPSTLPSAQNNT-PSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
          PGNQSSF GTNS STLPSAQN+  PSLSSFSQLGASLNTGFGARPSNPPN  FGQ VQ SS ++ SS FG+ NFPSTS VAV G
Subjt:  RAPGNQSSFSGTNSPSTLPSAQNNT-PSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

A0A6J1EHE7 zinc finger CCCH domain-containing protein 16 isoform X1

7.7e-118

77.97

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD
        MHYKK+PCR+FQRGSCQYGERCKFLH TQQP               QQQKPNPFGFGV + GQSKA  D GSKQNQYK ++NKWTR ST TGNA SRKPD
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD

Query:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN
        N   S+NH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLLNSKLAEFE LL KPYVTPSN
Subjt:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN

Query:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        RA GNQSS   TNS S  PS+QN+  PSLSSFSQLGASLNTGFGARPSNPPN  FGQ VQFSS  +NSS FG TNFPST+  AVGG
Subjt:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

A0A6J1KZY0 zinc finger CCCH domain-containing protein 16 isoform X1

2.4e-119

78.67

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD
        MHYKK+PCR+FQRGSCQYGERCKFLH TQQP               QQQKPNPFGFGV ++GQSKA  D GSKQNQYK +ENKWTR ST TGNA SRKPD
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHATQQP---------------QQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPD

Query:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN
        N   S+NH CTDGESCKRQIAEDFQNERPLWKLTCYGH+K++PCDIVGDVSYEELR IAYDEAKRGISLQSIVERERNLLNSKLAEFE LL KPYVTP N
Subjt:  NHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSN

Query:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG
        RA GNQSS SGTNS S  PS+QN+  PSLSSFSQLGASLNTGFGARPSNPPN  FGQ VQFSS  +NSS FG TNFPST+  AVGG
Subjt:  RAPGNQSSFSGTNSPSTLPSAQNN-TPSLSSFSQLGASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGG

SwissProt top hits

e value

%identity

Alignment

Q5Z807 Zinc finger CCCH domain-containing protein 46

6.2e-48

43.37

Show/hide

Query:  MHYKKQPCRDFQRGSCQYGERCKFLHAT----QQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQY----------------------------KPFENK
        M  +++ CR+FQRGSC+YG +C++LHA+    QQ QQ KPNPFGFG  +  Q +    FGS+  Q                             KPF+NK
Subjt:  MHYKKQPCRDFQRGSCQYGERCKFLHAT----QQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQY----------------------------KPFENK

Query:  WTR-PSTSTGNAQSRKPDNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNS
        W R PS  T   ++ +P     +++  C D +SC++QI+EDF+NE P+WKLTCY H +N PC+I GD+S+EELR  AY+E K+G SLQSIVE ERNL N+
Subjt:  WTR-PSTSTGNAQSRKPDNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNS

Query:  KLAEFEGLLQ--KPYVTPSNRAPGNQSSFSGTNSPSTLPSAQNNTPSL-SSFSQLGASLNTGFG---ARPSNPPNTVFG
        KL EF  LL   +P  TPS       SSF    + S+  ++Q N P + SSFSQ+GA+ N G G     P  P ++ FG
Subjt:  KLAEFEGLLQ--KPYVTPSNRAPGNQSSFSGTNSPSTLPSAQNNTPSL-SSFSQLGASLNTGFG---ARPSNPPNTVFG

Q9FWS3 Zinc finger CCCH domain-containing protein 16

2.6e-54

48.23

Show/hide

Query:  KKQPCRDFQRGSCQYGERCKFLHATQQPQQQKP-NPFGFGVPNNGQ--------SKAVADFG------SKQNQYKPFENKWTR-PSTSTGN---AQSRKP
        +K+ CR+FQRGSC+YGE C+FLH    PQQ KP NPFGFG  N  Q        S     FG      S+ NQ   F+N W+R  ST TG    A +++ 
Subjt:  KKQPCRDFQRGSCQYGERCKFLHATQQPQQQKP-NPFGFGVPNNGQ--------SKAVADFG------SKQNQYKPFENKWTR-PSTSTGN---AQSRKP

Query:  DNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPS
              ++HKCTD  +CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELR +AY+EAKRGI LQSIVERERNL NSK+AEFE  L+ PY    
Subjt:  DNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPS

Query:  NRAPGNQSSFSGTNSPSTLP-SAQNNTPS--LSSFSQLGASLNTGFGA-RPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPS
             NQS F+ T +PS  P S+Q N+PS   S F+Q  A  NT  G    S PPN       Q + P  N+ G   +  P+
Subjt:  NRAPGNQSSFSGTNSPSTLP-SAQNNTPS--LSSFSQLGASLNTGFGA-RPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPS

Arabidopsis top hits

e value

%identity

Alignment

AT1G75340.1 Zinc finger C-x8-C-x5-C-x3-H type family protein

1.8e-55

48.23

Show/hide

Query:  KKQPCRDFQRGSCQYGERCKFLHATQQPQQQKP-NPFGFGVPNNGQ--------SKAVADFG------SKQNQYKPFENKWTR-PSTSTGN---AQSRKP
        +K+ CR+FQRGSC+YGE C+FLH    PQQ KP NPFGFG  N  Q        S     FG      S+ NQ   F+N W+R  ST TG    A +++ 
Subjt:  KKQPCRDFQRGSCQYGERCKFLHATQQPQQQKP-NPFGFGVPNNGQ--------SKAVADFG------SKQNQYKPFENKWTR-PSTSTGN---AQSRKP

Query:  DNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPS
              ++HKCTD  +CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELR +AY+EAKRGI LQSIVERERNL NSK+AEFE  L+ PY    
Subjt:  DNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPS

Query:  NRAPGNQSSFSGTNSPSTLP-SAQNNTPS--LSSFSQLGASLNTGFGA-RPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPS
             NQS F+ T +PS  P S+Q N+PS   S F+Q  A  NT  G    S PPN       Q + P  N+ G   +  P+
Subjt:  NRAPGNQSSFSGTNSPSTLP-SAQNNTPS--LSSFSQLGASLNTGFGA-RPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPS

AT1G75340.2 Zinc finger C-x8-C-x5-C-x3-H type family protein

1.0e-50

44.37

Show/hide

Query:  KKQPCRDFQRGS--------------------CQYGERCKFLHATQQPQQQKP-NPFGFGVPNNGQ--------SKAVADFG------SKQNQYKPFENK
        +K+ CR+FQRGS                    C+YGE C+FLH    PQQ KP NPFGFG  N  Q        S     FG      S+ NQ   F+N 
Subjt:  KKQPCRDFQRGS--------------------CQYGERCKFLHATQQPQQQKP-NPFGFGVPNNGQ--------SKAVADFG------SKQNQYKPFENK

Query:  WTR-PSTSTGN---AQSRKPDNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNL
        W+R  ST TG    A +++       ++HKCTD  +CKR + +DF+NERP+WKLTCYGH K  PCD+ GD+SYEELR +AY+EAKRGI LQSIVERERNL
Subjt:  WTR-PSTSTGN---AQSRKPDNHLPSSNHKCTDGESCKRQIAEDFQNERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNL

Query:  LNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSPSTLP-SAQNNTPS--LSSFSQLGASLNTGFGARPSNPPNTVFGQ--------QVQFSSPVQNSS
         NSK+AEFE  L+ PY         NQS F+ T +PS  P S+Q N+PS   S F+Q  A  NT  G   S+ P   F           V    PV +  
Subjt:  LNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSPSTLP-SAQNNTPS--LSSFSQLGASLNTGFGARPSNPPNTVFGQ--------QVQFSSPVQNSS

Query:  GFGMTNFPSTS
            TN PST+
Subjt:  GFGMTNFPSTS

Sequences

Show/hide sequences

CDS sequence

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ATGCATTACAAGAAACAACCCTGCCGAGATTTTCAGCGTGGCAGCTGTCAGTATGGTGAAAGGTGCAAATTTCTCCACGCCACTCAGCAACCACAACAACAAAAACCTAA
TCCCTTTGGATTTGGAGTTCCTAACAACGGTCAATCTAAAGCGGTTGCTGATTTTGGATCCAAACAAAACCAATATAAGCCATTTGAAAACAAGTGGACTCGTCCTTCCA
CCTCTACGGGAAATGCTCAATCTCGAAAACCGGACAATCATCTCCCGTCCTCTAATCACAAATGCACAGATGGAGAGTCTTGCAAGCGCCAAATTGCTGAAGATTTTCAA
AATGAGAGGCCATTATGGAAATTGACTTGTTATGGCCACAATAAAAATGAACCTTGTGACATTGTTGGTGATGTTAGTTACGAAGAACTACGAACAATTGCTTATGACGA
AGCCAAACGAGGAATAAGTTTGCAATCAATTGTTGAAAGAGAGAGAAATTTACTTAATTCTAAGTTAGCCGAGTTTGAGGGCCTTCTTCAGAAGCCATATGTAACACCAT
CAAATCGTGCTCCTGGCAACCAAAGCTCATTTTCAGGAACTAATTCTCCTTCAACTCTACCAAGTGCTCAAAATAACACTCCTTCATTGTCAAGTTTTAGCCAGTTGGGT
GCATCACTTAATACGGGATTTGGTGCTAGGCCCTCTAATCCACCTAATACTGTATTTGGCCAGCAAGTTCAATTTTCAAGCCCTGTGCAAAACTCGAGTGGATTTGGAAT
GACCAATTTTCCATCAACAAGTGTGGTTGCTGTTGGAGGGACAAGCTTTTTTATTGATAAAAACTCAAAGTACAAGAGAGTTATACAGTGA

mRNA sequence

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GTGATACCGGCGCGCCATAGCGCCGTATACGGAAGCTTGAAAAGAAGTTCTCAGAAAAAAGTTTAGGAAAATACTCATCGCCAAGGAGAGATTGAGCGCGAAGCAAAATC
TGGAATCTAGGGGCAAAGAATAATCATGCATTACAAGAAACAACCCTGCCGAGATTTTCAGCGTGGCAGCTGTCAGTATGGTGAAAGGTGCAAATTTCTCCACGCCACTC
AGCAACCACAACAACAAAAACCTAATCCCTTTGGATTTGGAGTTCCTAACAACGGTCAATCTAAAGCGGTTGCTGATTTTGGATCCAAACAAAACCAATATAAGCCATTT
GAAAACAAGTGGACTCGTCCTTCCACCTCTACGGGAAATGCTCAATCTCGAAAACCGGACAATCATCTCCCGTCCTCTAATCACAAATGCACAGATGGAGAGTCTTGCAA
GCGCCAAATTGCTGAAGATTTTCAAAATGAGAGGCCATTATGGAAATTGACTTGTTATGGCCACAATAAAAATGAACCTTGTGACATTGTTGGTGATGTTAGTTACGAAG
AACTACGAACAATTGCTTATGACGAAGCCAAACGAGGAATAAGTTTGCAATCAATTGTTGAAAGAGAGAGAAATTTACTTAATTCTAAGTTAGCCGAGTTTGAGGGCCTT
CTTCAGAAGCCATATGTAACACCATCAAATCGTGCTCCTGGCAACCAAAGCTCATTTTCAGGAACTAATTCTCCTTCAACTCTACCAAGTGCTCAAAATAACACTCCTTC
ATTGTCAAGTTTTAGCCAGTTGGGTGCATCACTTAATACGGGATTTGGTGCTAGGCCCTCTAATCCACCTAATACTGTATTTGGCCAGCAAGTTCAATTTTCAAGCCCTG
TGCAAAACTCGAGTGGATTTGGAATGACCAATTTTCCATCAACAAGTGTGGTTGCTGTTGGAGGGACAAGCTTTTTTATTGATAAAAACTCAAAGTACAAGAGAGTTATA
CAGTGAGAATAATAAAGAAGCCAAGAAGGGGGGGAGAGGATCGGTAGGTGCACCCGAACATCTCAACTAGGTTAACACCCCCTTAGTGTCATGAGCATGCTTGTCCAGGG
CGTTGTTTGCTTATGGCCGCATGCCCAAACATCCTCTCACCACCTTATTTTTATGCTTTCGTACTTAGTTTAGCTTGTTTCTTTTATTTTCGATGTCACTTGCTTGTAAG
TGACTCCTCGCACTTTTC

Protein sequence

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MHYKKQPCRDFQRGSCQYGERCKFLHATQQPQQQKPNPFGFGVPNNGQSKAVADFGSKQNQYKPFENKWTRPSTSTGNAQSRKPDNHLPSSNHKCTDGESCKRQIAEDFQ
NERPLWKLTCYGHNKNEPCDIVGDVSYEELRTIAYDEAKRGISLQSIVERERNLLNSKLAEFEGLLQKPYVTPSNRAPGNQSSFSGTNSPSTLPSAQNNTPSLSSFSQLG
ASLNTGFGARPSNPPNTVFGQQVQFSSPVQNSSGFGMTNFPSTSVVAVGGTSFFIDKNSKYKRVIQ

PI0018466 (gene) of Melon (PI 482460) v1 genome