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PI0018481 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018481
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-protease polyprotein
Genome locationchr05:16705326..16705860
RNA-Seq ExpressionPI0018481
SyntenyPI0018481
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0006885 - regulation of pH (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:1902600 - proton transmembrane transport (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0015299 - solute:proton antiporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031736733.1 uncharacterized protein LOC116402075 [Cucumis sativus]3.5e-0676.92Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
        MLSRFAPELV  E+ARAERFVKGLR +IRGFV+A KP +
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
XP_031743979.1 uncharacterized protein LOC116404750 [Cucumis sativus]5.9e-0674.36Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
        MLSRFAPELV  E+ARA+RFVKGLR +IRGFV+A KP +
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
XP_031744116.1 uncharacterized protein LOC116404788 [Cucumis sativus]5.9e-0674.36Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
        MLSRFAPELV  E+ARA+RFVKGLR +IRGFV+A KP +
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
XP_031745635.1 uncharacterized protein LOC116406054 [Cucumis sativus]5.9e-0674.36Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
        MLSRFAPELV  E+ARA+RFVKGLR +IRGFV+A KP +
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
XP_031745846.1 uncharacterized protein LOC116406285 [Cucumis sativus]5.9e-0674.36Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
        MLSRFAPELV  E+ARA+RFVKGLR +IRGFV+A KP +
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
TrEMBL top hitse value%identityAlignment
A0A5A7SRD1 Gag protease polyprotein1.4e-0546.97Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS----------LRAAPKADRARLEGEGS
        MLSRFAPE++ TE ARA++FV+GLR DI+G V+AF+PA+          L    +A+ ++ +G GS
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS----------LRAAPKADRARLEGEGS
A0A5A7T1P7 Gag-protease polyprotein1.4e-0546.97Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS----------LRAAPKADRARLEGEGS
        MLSRFAPE++ TE ARA++FV+GLR DI+G V+AF+PA+          L    +A+ +++ G GS
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS----------LRAAPKADRARLEGEGS
A0A5A7TK90 Reverse transcriptase6.4e-0669.23Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
        MLSRFAPE++ TE ARA++FV+GLR DI+GFV+AF+PA+
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPAS
A0A5A7UH11 Gag protease polyprotein1.1e-0539.39Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPASLRAAPKADRARLE-----GEGSDDAWLGGSGPTEARREQELGSWTKTVDENPQLDLGFRR
        MLSRFAPE++ TE ARA++FV+GLR DI+G V+AF+PA+      AD  RL       E ++ + + G G T  ++ +     T     N +  + FRR
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPASLRAAPKADRARLE-----GEGSDDAWLGGSGPTEARREQELGSWTKTVDENPQLDLGFRR
A0A5D3CQ98 Gag-protease polyprotein8.3e-0667.44Show/hide
Query:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPASLRAA
        MLS FA +LVDTE+AR+ERFV GL+ +I GFV+AFKPA+L  A
Subjt:  MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPASLRAA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTCGTTTTGCTCCTGAGTTGGTGGACACGGAGCGCGCCCGCGCCGAGAGGTTTGTCAAAGGTTTGAGGGGCGACATCCGTGGTTTTGTCAAGGCTTTTAAGCC
AGCATCCCTAAGGGCAGCACCGAAGGCGGACCGAGCTCGACTGGAAGGAGAAGGAAGCGACGATGCGTGGCTTGGCGGCTCGGGTCCTACAGAAGCTCGACGCGAACAGG
AACTCGGCTCATGGACGAAGACGGTGGACGAAAATCCACAGCTTGATCTCGGCTTCCGCCGATCAGATGTGCGCGAACGAAGTCAGTCACGGACCAACTCGACGTGGCTT
GATCTAAAACGGGATGACTGGGGTGCGGACGGCTTCACAAATGGAGACGAAACTTCGAGGTACGGACGAAGACGAACAAAAACGAAGCTTCACGACAGCGCTAGGTTGAA
CGGAGAAGAAGAGAAGAACTTGGGCAATGGCGACGACGTGAAGAAGAAGGAGGGTTTAGTTCTTGGCATGGTTCACGAGACTCTTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTCGTTTTGCTCCTGAGTTGGTGGACACGGAGCGCGCCCGCGCCGAGAGGTTTGTCAAAGGTTTGAGGGGCGACATCCGTGGTTTTGTCAAGGCTTTTAAGCC
AGCATCCCTAAGGGCAGCACCGAAGGCGGACCGAGCTCGACTGGAAGGAGAAGGAAGCGACGATGCGTGGCTTGGCGGCTCGGGTCCTACAGAAGCTCGACGCGAACAGG
AACTCGGCTCATGGACGAAGACGGTGGACGAAAATCCACAGCTTGATCTCGGCTTCCGCCGATCAGATGTGCGCGAACGAAGTCAGTCACGGACCAACTCGACGTGGCTT
GATCTAAAACGGGATGACTGGGGTGCGGACGGCTTCACAAATGGAGACGAAACTTCGAGGTACGGACGAAGACGAACAAAAACGAAGCTTCACGACAGCGCTAGGTTGAA
CGGAGAAGAAGAGAAGAACTTGGGCAATGGCGACGACGTGAAGAAGAAGGAGGGTTTAGTTCTTGGCATGGTTCACGAGACTCTTATTTAA
Protein sequenceShow/hide protein sequence
MLSRFAPELVDTERARAERFVKGLRGDIRGFVKAFKPASLRAAPKADRARLEGEGSDDAWLGGSGPTEARREQELGSWTKTVDENPQLDLGFRRSDVRERSQSRTNSTWL
DLKRDDWGADGFTNGDETSRYGRRRTKTKLHDSARLNGEEEKNLGNGDDVKKKEGLVLGMVHETLI