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PI0018489 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018489
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCytochrome c oxidase
Genome locationchr04:32969249..32971364
RNA-Seq ExpressionPI0018489
SyntenyPI0018489
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465918.1 PREDICTED: putative cytochrome c oxidase subunit 6b-like [Cucumis melo]6.4e-7087.42Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSE--DKDNKVVMDEGLETAPSDLRFPFTNQTRHCYA
        MSASQ+DPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD RR GSE  DKDNKVVMDEG+ETAPSDLRFPFTNQTRHCYA
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSE--DKDNKVVMDEGLETAPSDLRFPFTNQTRHCYA

Query:  RYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        RYLEYH C+QKKG+HAP+CKKFA YYRSLCPGEW+EKWNEQRELGVFPGP+
Subjt:  RYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

XP_022932983.1 cytochrome c oxidase subunit 6b-3-like [Cucurbita moschata]1.1e-5881.02Show/hide
Query:  RSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGK
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSSSS  SAQTN DGN  DRR G +DKD+KVV++EG+ETAP+D+RFPFTNQTRHCY RYLEYH  LQKKG+
Subjt:  RSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGK

Query:  HAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        HAP+C KFAKYYRSLCP EWIEKWNEQRELG+FPGP+
Subjt:  HAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

XP_031737980.1 putative cytochrome c oxidase subunit 6b-like isoform X1 [Cucumis sativus]3.6e-6590.98Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY
        MSASQ+DPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTN DGNDDDRRRGSED+DNKVVMDEG+ TAPSD+RFPFTNQTRHCYARY
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY

Query:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWI
        LEYH C+QKKG+HAP+CKKFAKYYRSLCPGEW+
Subjt:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWI

XP_031737981.1 cytochrome c oxidase subunit 6B isoform X2 [Cucumis sativus]3.5e-7691.95Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY
        MSASQ+DPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTN DGNDDDRRRGSED+DNKVVMDEG+ TAPSD+RFPFTNQTRHCYARY
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY

Query:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        LEYH C+QKKG+HAP+CKKFAKYYRSLCPGEW+EKWNEQRELGVFPGPM
Subjt:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

XP_038886888.1 putative cytochrome c oxidase subunit 6b-like [Benincasa hispida]2.0e-7189.26Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY
        MSA+QVDPHDKMRSRD+SKV RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTN DGNDDDRRRG ED DNK   DEGLETAP+DLRFPFTNQTRHCYARY
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY

Query:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        LEYH C+QK+G+HAP+CKKFAKYYRSLCPGEWIEKWNEQRELGVFPGP+
Subjt:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

TrEMBL top hitse value%identityAlignment
A0A0A0LEH8 Uncharacterized protein1.7e-7691.95Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY
        MSASQ+DPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTN DGNDDDRRRGSED+DNKVVMDEG+ TAPSD+RFPFTNQTRHCYARY
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY

Query:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        LEYH C+QKKG+HAP+CKKFAKYYRSLCPGEW+EKWNEQRELGVFPGPM
Subjt:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

A0A1S3CQ05 putative cytochrome c oxidase subunit 6b-like3.1e-7087.42Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSE--DKDNKVVMDEGLETAPSDLRFPFTNQTRHCYA
        MSASQ+DPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD RR GSE  DKDNKVVMDEG+ETAPSDLRFPFTNQTRHCYA
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSE--DKDNKVVMDEGLETAPSDLRFPFTNQTRHCYA

Query:  RYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        RYLEYH C+QKKG+HAP+CKKFA YYRSLCPGEW+EKWNEQRELGVFPGP+
Subjt:  RYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

A0A5D3E4S8 Putative cytochrome c oxidase subunit 6b-like3.1e-7087.42Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSE--DKDNKVVMDEGLETAPSDLRFPFTNQTRHCYA
        MSASQ+DPHDKMRSRD+SKVARGEQAPRPAHEYGTVSKPPPPSS+SVPSAQT    NDD RR GSE  DKDNKVVMDEG+ETAPSDLRFPFTNQTRHCYA
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSE--DKDNKVVMDEGLETAPSDLRFPFTNQTRHCYA

Query:  RYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        RYLEYH C+QKKG+HAP+CKKFA YYRSLCPGEW+EKWNEQRELGVFPGP+
Subjt:  RYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

A0A6J1F3D0 cytochrome c oxidase subunit 6b-3-like5.5e-5981.02Show/hide
Query:  RSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGK
        R RD+SKVARGEQAPRP HEYGTVSKPPPPSSSS  SAQTN DGN  DRR G +DKD+KVV++EG+ETAP+D+RFPFTNQTRHCY RYLEYH  LQKKG+
Subjt:  RSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGK

Query:  HAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        HAP+C KFAKYYRSLCP EWIEKWNEQRELG+FPGP+
Subjt:  HAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

A0A6J1IE20 cytochrome c oxidase subunit 6b-3-like1.8e-5477.21Show/hide
Query:  RSRDLSKVARGEQAPRPAHEYGTVSKPPPP-SSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKG
        R RD+SKVARGEQAPRP HEYGTVSKPPPP SSSS  SAQTN DGN  + R G +D+  KVV++EG+ETAP+D+RFPFTNQTRHCY RYLEYH CLQKKG
Subjt:  RSRDLSKVARGEQAPRPAHEYGTVSKPPPP-SSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKG

Query:  KHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPG
        +H P+C KFAKYYRSLCP +WIEKWNEQRELG+FPG
Subjt:  KHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPG

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial3.5e-1845.88Show/hide
Query:  SEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        SE +D +        T   D RFP TNQT+HC+  Y++Y  C++ KG+    CK+F   Y+SLCP EW+E+W+EQRE G FP P+
Subjt:  SEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

Q945L0 Cytochrome c oxidase subunit 6b-23.7e-2866.67Show/hide
Query:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        L+TAP+D RFP TNQTRHC+ RY+E+H C   KG+ + DC++FAKYYR+LCPGEW++KWNEQRE G FPGP+
Subjt:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

Q9LPJ2 Putative cytochrome c oxidase subunit 6b-like4.5e-2645.93Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY
        MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS  PPP + +   A+    G + D                    A  + RFP TN+TRHC+ R+
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY

Query:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEK
        ++YH C++K G+ A DC     Y RS+CP E + K
Subjt:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEK

Q9S7L9 Cytochrome c oxidase subunit 6b-15.4e-2746.09Show/hide
Query:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFA
        + E AP         S+ P  +  +        + N+D+    SE+   +   +  LETAP+D RFP TNQTRHC+ RY+EYH C+  KG  AP+C KFA
Subjt:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFA

Query:  KYYRSLCPGEWIEKWNEQRELGVFPGPM
        K+YRSLCP EW+++WNEQRE G FPGP+
Subjt:  KYYRSLCPGEWIEKWNEQRELGVFPGPM

Q9SUD3 Cytochrome c oxidase subunit 6b-34.8e-2866.67Show/hide
Query:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        L+TAP+D RFP TNQTRHC+ RY+E+H C   KG+ A +C++FAKYYR+LCPGEW++KWNEQRE G FPGP+
Subjt:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B3.8e-2846.09Show/hide
Query:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFA
        + E AP         S+ P  +  +        + N+D+    SE+   +   +  LETAP+D RFP TNQTRHC+ RY+EYH C+  KG  AP+C KFA
Subjt:  RGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFA

Query:  KYYRSLCPGEWIEKWNEQRELGVFPGPM
        K+YRSLCP EW+++WNEQRE G FPGP+
Subjt:  KYYRSLCPGEWIEKWNEQRELGVFPGPM

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein3.2e-2745.93Show/hide
Query:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY
        MS++Q+DPHDKMRSRD+SKVARG+QAPRPAH  GTVS  PPP + +   A+    G + D                    A  + RFP TN+TRHC+ R+
Subjt:  MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARY

Query:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEK
        ++YH C++K G+ A DC     Y RS+CP E + K
Subjt:  LEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEK

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein3.4e-2966.67Show/hide
Query:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        L+TAP+D RFP TNQTRHC+ RY+E+H C   KG+ A +C++FAKYYR+LCPGEW++KWNEQRE G FPGP+
Subjt:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein2.6e-2966.67Show/hide
Query:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM
        L+TAP+D RFP TNQTRHC+ RY+E+H C   KG+ + DC++FAKYYR+LCPGEW++KWNEQRE G FPGP+
Subjt:  LETAPSDLRFPFTNQTRHCYARYLEYHGCLQKKGKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCGTCTCAGGTAGATCCTCACGACAAGATGAGATCTAGAGACCTAAGCAAGGTGGCACGTGGCGAACAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTC
AAAGCCTCCGCCGCCTTCGTCCTCCTCCGTTCCTTCCGCTCAGACCAACCCCGACGGCAACGACGACGATCGCCGCCGCGGAAGCGAAGACAAAGATAATAAGGTGGTAA
TGGATGAGGGACTAGAGACAGCCCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCACGCTATTTGGAATATCATGGGTGCTTGCAGAAGAAG
GGGAAACACGCACCTGACTGCAAGAAGTTCGCCAAGTATTATCGATCTCTATGTCCTGGTGAATGGATTGAGAAATGGAACGAGCAAAGGGAGCTTGGCGTCTTTCCTGG
TCCGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCGTCTCAGGTAGATCCTCACGACAAGATGAGATCTAGAGACCTAAGCAAGGTGGCACGTGGCGAACAAGCCCCAAGGCCAGCTCATGAATACGGCACCGTTTC
AAAGCCTCCGCCGCCTTCGTCCTCCTCCGTTCCTTCCGCTCAGACCAACCCCGACGGCAACGACGACGATCGCCGCCGCGGAAGCGAAGACAAAGATAATAAGGTGGTAA
TGGATGAGGGACTAGAGACAGCCCCAAGCGATCTTCGTTTTCCTTTCACTAATCAAACACGACATTGCTATGCACGCTATTTGGAATATCATGGGTGCTTGCAGAAGAAG
GGGAAACACGCACCTGACTGCAAGAAGTTCGCCAAGTATTATCGATCTCTATGTCCTGGTGAATGGATTGAGAAATGGAACGAGCAAAGGGAGCTTGGCGTCTTTCCTGG
TCCGATGTAA
Protein sequenceShow/hide protein sequence
MSASQVDPHDKMRSRDLSKVARGEQAPRPAHEYGTVSKPPPPSSSSVPSAQTNPDGNDDDRRRGSEDKDNKVVMDEGLETAPSDLRFPFTNQTRHCYARYLEYHGCLQKK
GKHAPDCKKFAKYYRSLCPGEWIEKWNEQRELGVFPGPM