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PI0018490 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018490
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGlutamate--tRNA ligase
Genome locationchr04:14438876..14439571
RNA-Seq ExpressionPI0018490
SyntenyPI0018490
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058525.1 putative transmembrane protein [Cucumis melo var. makuwa]7.4e-5093.86Show/hide
Query:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNY AYVNQNSS RPLAI+LALASAV LSPLRSYETSW SGFVVPLVLLGLIIAIKTSS C+STSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

KAE8637311.1 hypothetical protein CSA_023553, partial [Cucumis sativus]3.0e-5194.74Show/hide
Query:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNY AY NQNSSQRPLAI LALASAVVLSPLRSYETSW SGFVVPLVLLGLI+AIKTSSSC+STSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

KAF7814039.1 hypothetical protein G2W53_028008 [Senna tora]1.9e-2962.81Show/hide
Query:  YRAYVNQNSSQRPLAILLALASAVVLSPL-----------RSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAG
        Y AY +Q SSQR LA++LALASAVVLSPL           R YE+ W  GFV+P++L GLIIAI+TSSS +ST R +++LPS  PSWVL+IGSSSWGLAG
Subjt:  YRAYVNQNSSQRPLAILLALASAVVLSPL-----------RSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAG

Query:  ILMMLILGLSWQSSVQEFLWR
        +L+ML+L L WQ+SVQEF WR
Subjt:  ILMMLILGLSWQSSVQEFLWR

KAG6581812.1 hypothetical protein SDJN03_21814, partial [Cucurbita argyrosperma subsp. sororia]2.4e-4081.51Show/hide
Query:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGIL
        MDSNY AY NQ SSQRPLAI+LALASAVVLSPLR YE+ W SGFV+PLVLL LIIAIKTSSSC+S S     RDSAIL SD PSWVLKIGSSSWGLAG+L
Subjt:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTS-----RDSAILPSDHPSWVLKIGSSSWGLAGIL

Query:  MMLILGLSWQSSVQEFLWR
        MMLI GLSWQSSV+EFLWR
Subjt:  MMLILGLSWQSSVQEFLWR

XP_030969466.1 uncharacterized protein LOC115989757 [Quercus lobata]8.5e-3064.41Show/hide
Query:  YVNQNSSQRPLAILLALASAVVLSPL--------RSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM
        Y +Q SSQR +A++LAL SA+VLSPL        R YET W SGFV+P+VL GLIIAIKT+SSC+S S     ++I+PS  PSWVL+IGSSSWGLAGIL+
Subjt:  YVNQNSSQRPLAILLALASAVVLSPL--------RSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM

Query:  MLILGLSWQSSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQSSVQEFLWR

TrEMBL top hitse value%identityAlignment
A0A067KX22 Uncharacterized protein5.9e-2963.03Show/hide
Query:  YRAYVNQNSSQRPLAILLALASAVVLSP---------LRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGIL
        Y  Y +QNSSQR LA++LAL SAVVLSP         LR YET W SGFV+P+VL GLIIAI+T+S+ +S  R  +++P   PSWVL+IGSSSWGLAGIL
Subjt:  YRAYVNQNSSQRPLAILLALASAVVLSP---------LRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGIL

Query:  MMLILGLSWQSSVQEFLWR
        +ML+L LSWQ SVQEF WR
Subjt:  MMLILGLSWQSSVQEFLWR

A0A0A0LEN3 Uncharacterized protein1.5e-5194.74Show/hide
Query:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNY AY NQNSSQRPLAI LALASAVVLSPLRSYETSW SGFVVPLVLLGLI+AIKTSSSC+STSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

A0A2N9IBH6 Uncharacterized protein4.5e-2961.34Show/hide
Query:  YVNQNSSQRPLAILLALASAVVLSPLRS--------YETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRD----SAILPSDHPSWVLKIGSSSWGLAGIL
        Y  Q SSQR +A++L+L SA+VLSPL +        YET W SGFV+P+VL+GLIIAI+T+SSC+S S      ++I+PS  PSWVL+IGSSSWGLAGIL
Subjt:  YVNQNSSQRPLAILLALASAVVLSPLRS--------YETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRD----SAILPSDHPSWVLKIGSSSWGLAGIL

Query:  MMLILGLSWQSSVQEFLWR
        +ML+L LSWQ+SVQEF WR
Subjt:  MMLILGLSWQSSVQEFLWR

A0A5A7UY99 Putative transmembrane protein3.6e-5093.86Show/hide
Query:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
        MDSNY AYVNQNSS RPLAI+LALASAV LSPLRSYETSW SGFVVPLVLLGLIIAIKTSS C+STSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL
Subjt:  MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLIL

Query:  GLSWQSSVQEFLWR
        GLSWQSSVQEFLWR
Subjt:  GLSWQSSVQEFLWR

A0A7N2LMQ6 Uncharacterized protein4.1e-3064.41Show/hide
Query:  YVNQNSSQRPLAILLALASAVVLSPL--------RSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM
        Y +Q SSQR +A++LAL SA+VLSPL        R YET W SGFV+P+VL GLIIAIKT+SSC+S S     ++I+PS  PSWVL+IGSSSWGLAGIL+
Subjt:  YVNQNSSQRPLAILLALASAVVLSPL--------RSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRD---SAILPSDHPSWVLKIGSSSWGLAGILM

Query:  MLILGLSWQSSVQEFLWR
        ML+L LSWQ SVQEF WR
Subjt:  MLILGLSWQSSVQEFLWR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGTAACTACAGAGCTTACGTGAACCAGAACTCGTCTCAGAGACCACTGGCCATTCTTTTGGCTCTTGCTTCTGCAGTGGTGCTTTCACCATTAAGATCCTATGA
AACCAGTTGGCGCTCTGGATTTGTTGTTCCACTAGTTCTTTTGGGACTTATAATTGCCATTAAGACATCATCATCTTGCACATCCACATCCAGAGATTCTGCAATTCTCC
CTTCAGATCATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCGGGGATCTTAATGATGTTGATTCTTGGGCTTTCTTGGCAAAGTTCTGTTCAAGAA
TTCCTCTGGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATATGAAAGATACCTTACTTCCAAGCCAAAGCAACGCTTTTCACAATTATTGATCATAAATAAAATAGCTCCTTTTATGTTTATACTTTTTTCGCTTTTTGGACGGCTAT
GCTCATCGTCTGATAACAGCCTTTCCACATAGATTCCTTCATCCATGGCCACTATTTTCCTCCCTATAAAAAAAACTCCTGTTTTCCGTCTAGTTTTTGCTCGACAGCAA
GCAGCAACTCTTTTTTGATAAAACCCAAAATCATGGATAGTAACTACAGAGCTTACGTGAACCAGAACTCGTCTCAGAGACCACTGGCCATTCTTTTGGCTCTTGCTTCT
GCAGTGGTGCTTTCACCATTAAGATCCTATGAAACCAGTTGGCGCTCTGGATTTGTTGTTCCACTAGTTCTTTTGGGACTTATAATTGCCATTAAGACATCATCATCTTG
CACATCCACATCCAGAGATTCTGCAATTCTCCCTTCAGATCATCCTTCATGGGTTCTTAAAATTGGGAGCTCCTCTTGGGGACTTGCGGGGATCTTAATGATGTTGATTC
TTGGGCTTTCTTGGCAAAGTTCTGTTCAAGAATTCCTCTGGAGATAGAGAACCAAACCGACTTGAATTTCTAATTTTGTTTGACTTATAATCTTGTATTGTTGCTTGCCA
CCTGGGTGATACGTATTAGAATGCATTGATATCGGC
Protein sequenceShow/hide protein sequence
MDSNYRAYVNQNSSQRPLAILLALASAVVLSPLRSYETSWRSGFVVPLVLLGLIIAIKTSSSCTSTSRDSAILPSDHPSWVLKIGSSSWGLAGILMMLILGLSWQSSVQE
FLWR