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PI0018514 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018514
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:7029313..7030385
RNA-Seq ExpressionPI0018514
SyntenyPI0018514
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.4e-5446.55Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                             
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------

Query:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN
                                              R+F A    I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVLN
Subjt:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN

Query:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY
        ICN NE+YM+NI+YMYDVPIVPAP QRRR  VQE  + +EVD H +EVPP+TQTQ++  YVSP+MMMP FGT+YY
Subjt:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.7e-5656.28Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQYRKFIAM-----------------------------RT-----------TINQFDMDVIEEY
        +APQL H N   L G+A GSRW+DQF VTR ATHVVSQYR    +                             RT           +I QFD+DV +EY
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQYRKFIAM-----------------------------RT-----------TINQFDMDVIEEY

Query:  IHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQESEFDEVDHHVEEVPPVTQTQNKAGY
        IH+Y NITRLYITRP AAVGHLRSNN+RLRDVADDPQQVLNICN N+RYM+ I+ MYD+ IVP P  R R  V+E+E DEV H+VEEVPP TQTQ++ GY
Subjt:  IHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQESEFDEVDHHVEEVPPVTQTQNKAGY

Query:  VSPMMMMPLFGTSYY
         SPM MMP FG  YY
Subjt:  VSPMMMMPLFGTSYY

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.9e-5446.55Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                             
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------

Query:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN
                                              R+F A    I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVLN
Subjt:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN

Query:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY
        ICN NE+YM+NI+YMYDVPIVPAP QRRR  VQE  + +EVD H +EVPP+TQTQ++  YVSP+MMMP FGT+YY
Subjt:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.4e-5554.35Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY----------------------------------------------------RKFIAMRTT
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                    R+F A    
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY----------------------------------------------------RKFIAMRTT

Query:  INQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEE
        I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN RLR+VADD QQVLNICN NE+YM+NI+YMYDVPIV AP Q+RR  VQE  + +EVD H EE
Subjt:  INQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEE

Query:  VPPVTQTQNKA--GYVSPMMMMPLFGTSYY
        VPP+TQTQ ++   YV P+MMMP FGT+YY
Subjt:  VPPVTQTQNKA--GYVSPMMMMPLFGTSYY

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-5651.2Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                             
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------

Query:  -----------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQR
                   R+F A    I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVLNICN NE+YM+NI+YMYDVPIVPAP QR
Subjt:  -----------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQR

Query:  RRAEVQES-EFDEVDHHVEEVPPVTQTQNKA--GYVSPMMMMPLFGTSYY
        RR  VQES + +EVD H EEVPP+TQTQ ++   YVSP+MMMP FG +YY
Subjt:  RRAEVQES-EFDEVDHHVEEVPPVTQTQNKA--GYVSPMMMMPLFGTSYY

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-5446.55Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                             
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------

Query:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN
                                              R+F A    I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVLN
Subjt:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN

Query:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY
        ICN NE+YM+NI+YMYDVPIVPAP QRRR  VQE  + +EVD H +EVPP+TQTQ++  YVSP+MMMP FGT+YY
Subjt:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-5656.28Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQYRKFIAM-----------------------------RT-----------TINQFDMDVIEEY
        +APQL H N   L G+A GSRW+DQF VTR ATHVVSQYR    +                             RT           +I QFD+DV +EY
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQYRKFIAM-----------------------------RT-----------TINQFDMDVIEEY

Query:  IHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQESEFDEVDHHVEEVPPVTQTQNKAGY
        IH+Y NITRLYITRP AAVGHLRSNN+RLRDVADDPQQVLNICN N+RYM+ I+ MYD+ IVP P  R R  V+E+E DEV H+VEEVPP TQTQ++ GY
Subjt:  IHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQESEFDEVDHHVEEVPPVTQTQNKAGY

Query:  VSPMMMMPLFGTSYY
         SPM MMP FG  YY
Subjt:  VSPMMMMPLFGTSYY

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.8e-5446.55Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                             
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------

Query:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN
                                              R+F A    I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVLN
Subjt:  --------------------------------------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLN

Query:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY
        ICN NE+YM+NI+YMYDVPIVPAP QRRR  VQE  + +EVD H +EVPP+TQTQ++  YVSP+MMMP FGT+YY
Subjt:  ICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYY

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-5554.35Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY----------------------------------------------------RKFIAMRTT
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                    R+F A    
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY----------------------------------------------------RKFIAMRTT

Query:  INQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEE
        I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN RLR+VADD QQVLNICN NE+YM+NI+YMYDVPIV AP Q+RR  VQE  + +EVD H EE
Subjt:  INQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQRRRAEVQE-SEFDEVDHHVEE

Query:  VPPVTQTQNKA--GYVSPMMMMPLFGTSYY
        VPP+TQTQ ++   YV P+MMMP FGT+YY
Subjt:  VPPVTQTQNKA--GYVSPMMMMPLFGTSYY

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-5651.2Show/hide
Query:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------
        +APQL HVN  QL G+AYGSRWRDQF VTR ATHVVSQY                                                             
Subjt:  MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQY-------------------------------------------------------------

Query:  -----------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQR
                   R+F A    I QFDMDV +EYIH+YKNI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVLNICN NE+YM+NI+YMYDVPIVPAP QR
Subjt:  -----------RKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYMKNIYYMYDVPIVPAPAQR

Query:  RRAEVQES-EFDEVDHHVEEVPPVTQTQNKA--GYVSPMMMMPLFGTSYY
        RR  VQES + +EVD H EEVPP+TQTQ ++   YVSP+MMMP FG +YY
Subjt:  RRAEVQES-EFDEVDHHVEEVPPVTQTQNKA--GYVSPMMMMPLFGTSYY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTCAGCTTCGACATGTGAACGAACTTCAATTAGCTGGAAAGGCCTATGGTTCACGATGGAGAGATCAATTTAGTGTGACTAGGTTTGCTACACATGTTGTCTC
TCAGTATAGAAAATTTATTGCTATGAGGACTACAATTAATCAATTCGATATGGATGTAATTGAAGAATACATCCACTATTATAAAAATATTACAAGGCTCTACATTACTA
GACCGGGAGCAGCTGTGGGTCATCTGAGATCGAACAATAGTAGACTTCGTGATGTGGCAGATGATCCACAACAGGTTCTTAATATATGCAACAAAAACGAGCGGTACATG
AAGAATATATATTATATGTATGATGTACCCATTGTACCAGCACCAGCCCAAAGGAGACGTGCTGAAGTGCAAGAGTCTGAGTTTGACGAGGTTGACCATCACGTGGAAGA
AGTGCCTCCTGTGACACAAACACAAAATAAAGCTGGTTATGTTAGTCCAATGATGATGATGCCACTCTTTGGTACGAGCTATTATCCTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTCAGCTTCGACATGTGAACGAACTTCAATTAGCTGGAAAGGCCTATGGTTCACGATGGAGAGATCAATTTAGTGTGACTAGGTTTGCTACACATGTTGTCTC
TCAGTATAGAAAATTTATTGCTATGAGGACTACAATTAATCAATTCGATATGGATGTAATTGAAGAATACATCCACTATTATAAAAATATTACAAGGCTCTACATTACTA
GACCGGGAGCAGCTGTGGGTCATCTGAGATCGAACAATAGTAGACTTCGTGATGTGGCAGATGATCCACAACAGGTTCTTAATATATGCAACAAAAACGAGCGGTACATG
AAGAATATATATTATATGTATGATGTACCCATTGTACCAGCACCAGCCCAAAGGAGACGTGCTGAAGTGCAAGAGTCTGAGTTTGACGAGGTTGACCATCACGTGGAAGA
AGTGCCTCCTGTGACACAAACACAAAATAAAGCTGGTTATGTTAGTCCAATGATGATGATGCCACTCTTTGGTACGAGCTATTATCCTGGTTAG
Protein sequenceShow/hide protein sequence
MAPQLRHVNELQLAGKAYGSRWRDQFSVTRFATHVVSQYRKFIAMRTTINQFDMDVIEEYIHYYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLNICNKNERYM
KNIYYMYDVPIVPAPAQRRRAEVQESEFDEVDHHVEEVPPVTQTQNKAGYVSPMMMMPLFGTSYYPG