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PI0018523 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018523
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr04:19411233..19412110
RNA-Seq ExpressionPI0018523
SyntenyPI0018523
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025749.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]2.4e-2680.77Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE
        ME ESSN+KKNE SKE K+KS+S+QCWKCKGFGHM KDC+NKKVMVIRNG  D KDECDEHDA LEEE DAHDD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE

KAA0057648.1 putative polyprotein [Cucumis melo var. makuwa]1.0e-2172.15Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE
        +E ESSNTKK E SKEV++K+SSIQCWKCKGFGHM KDCINK+VMV+RNG  D +DEC+E+DAQLEEE++   DD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE

KAA0066461.1 uncharacterized protein E6C27_scaffold21G005620 [Cucumis melo var. makuwa]1.0e-2172.15Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE
        +E ESSNTKK E+SKEV++K+SSIQCWKCKGFGHM KDCINK+VMV+RNG  D +DEC+E+DAQLEEE++   DD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE

KGN53753.1 hypothetical protein Csa_014547 [Cucumis sativus]1.1e-2378.05Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIERERM
        MEVESSNTK N+ SKEVK+KSSSI+CWKCKG GHM KD +NKKVMVIRN   D K+ECDEHDA LEEE DAHDD YIE ERM
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIERERM

TYK06180.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.5e-2579.49Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE
        ME ESSN+KKNE SKE K+KS+S+QCWKCKGFGHM KDC+NKKVMVIRNG  D KDE DEHDA LEEE DAHDD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE

TrEMBL top hitse value%identityAlignment
A0A0A0KW07 Uncharacterized protein5.4e-2478.05Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIERERM
        MEVESSNTK N+ SKEVK+KSSSI+CWKCKG GHM KD +NKKVMVIRN   D K+ECDEHDA LEEE DAHDD YIE ERM
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIERERM

A0A5A7SKE7 Transposon Ty3-I Gag-Pol polyprotein1.2e-2680.77Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE
        ME ESSN+KKNE SKE K+KS+S+QCWKCKGFGHM KDC+NKKVMVIRNG  D KDECDEHDA LEEE DAHDD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE

A0A5A7UR86 Putative polyprotein5.1e-2272.15Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE
        +E ESSNTKK E SKEV++K+SSIQCWKCKGFGHM KDCINK+VMV+RNG  D +DEC+E+DAQLEEE++   DD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE

A0A5A7VLF9 CCHC-type domain-containing protein5.1e-2272.15Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE
        +E ESSNTKK E+SKEV++K+SSIQCWKCKGFGHM KDCINK+VMV+RNG  D +DEC+E+DAQLEEE++   DD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAH-DDGYIE

A0A5D3C4C3 Transposon Ty3-I Gag-Pol polyprotein1.7e-2579.49Show/hide
Query:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE
        ME ESSN+KKNE SKE K+KS+S+QCWKCKGFGHM KDC+NKKVMVIRNG  D KDE DEHDA LEEE DAHDD YIE
Subjt:  MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTGAGAGCTCCAACACTAAAAAGAATGAAACTTCAAAGGAGGTAAAGAAGAAGTCTAGTTCAATTCAATGTTGGAAGTGCAAAGGGTTTGGACACATGAAGAA
AGATTGTATCAATAAAAAAGTCATGGTGATAAGAAATGGGAAAACTGATTTGAAAGACGAATGTGATGAGCATGATGCACAACTTGAGGAAGAATTCGATGCACATGACG
ATGGGTACATTGAAAGAGAAAGAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTGAGAGCTCCAACACTAAAAAGAATGAAACTTCAAAGGAGGTAAAGAAGAAGTCTAGTTCAATTCAATGTTGGAAGTGCAAAGGGTTTGGACACATGAAGAA
AGATTGTATCAATAAAAAAGTCATGGTGATAAGAAATGGGAAAACTGATTTGAAAGACGAATGTGATGAGCATGATGCACAACTTGAGGAAGAATTCGATGCACATGACG
ATGGGTACATTGAAAGAGAAAGAATGTGA
Protein sequenceShow/hide protein sequence
MEVESSNTKKNETSKEVKKKSSSIQCWKCKGFGHMKKDCINKKVMVIRNGKTDLKDECDEHDAQLEEEFDAHDDGYIERERM