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PI0018557 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018557
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionextensin-3-like
Genome locationchr03:9633215..9633691
RNA-Seq ExpressionPI0018557
SyntenyPI0018557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058946.1 extensin-3-like [Cucumis melo var. makuwa]3.6e-3976.03Show/hide
Query:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL
        MPLLS NLPSNFATHYIP SLLSPP MPPTT+PIVPYHPFI  PPPFKKT KHTWSP S PQ+ELGRPIVPYYP KF PPP RK A+PP  YH+F P  L
Subjt:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL

Query:  PLPAKNLYMSEARR-RPAPPP
        P  AK L+MS AR+  PAPPP
Subjt:  PLPAKNLYMSEARR-RPAPPP

KAA0058948.1 extensin-3-like [Cucumis melo var. makuwa]6.7e-3377.36Show/hide
Query:  MPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPALPLPAKNLYMSEARRRPAPPPPPVN
        MP  TRPIVPYHPFIF PPPFKK F +HTW  PP PPQQ+L RPIVPYYP KFPPPPSRKQANPPLSYH F PP LPLPAK LYMSE RR  A PPPP  
Subjt:  MPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPALPLPAKNLYMSEARRRPAPPPPPVN

Query:  PPYVWP
         PY WP
Subjt:  PPYVWP

KAE8647164.1 hypothetical protein Csa_018816, partial [Cucumis sativus]2.1e-3975Show/hide
Query:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTW-SPPSPP-QQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPP
        M LLSLNLPSN A H IPSSLLSPP MPP TRPIVP+HPF F P PF+KTF+HTW  PPSPP QQEL RPIVPY+P KFPPPPSRKQANPP SYH F PP
Subjt:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTW-SPPSPP-QQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPP

Query:  ALPLPAKNLYMSEARRRPAPPPPPVNPPYVWP
        AL L A+ LYMSE  RR  PPPPP+  PY WP
Subjt:  ALPLPAKNLYMSEARRRPAPPPPPVNPPYVWP

TYK10982.1 extensin-3-like [Cucumis melo var. makuwa]3.6e-3976.03Show/hide
Query:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL
        MPLLS NLPSNFATHYIP SLLSPP MPPTT+PIVPYHPFI  PPPFKKT KHTWSP S PQ+ELGRPIVPYYP KF PPP RK A+PP  YH+F P  L
Subjt:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL

Query:  PLPAKNLYMSEARR-RPAPPP
        P  AK L+MS AR+  PAPPP
Subjt:  PLPAKNLYMSEARR-RPAPPP

XP_008466986.1 PREDICTED: extensin-3-like, partial [Cucumis melo]2.1e-5085.16Show/hide
Query:  MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSR
        MESHNPIFVF+LFII+PLLSLNLPSNFA HYIPSSLLSPPPMP  TRPIVPYHPFIF PPPFKK F +HTW  PP PPQQ+L RPIVPYYP KFPPPPSR
Subjt:  MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSR

Query:  KQANPPLSYHIFSPPALPLPAKNLYMSE
        KQANPPLSYH F PP LPLPAK LYMSE
Subjt:  KQANPPLSYHIFSPPALPLPAKNLYMSE

TrEMBL top hitse value%identityAlignment
A0A0A0KD80 Uncharacterized protein7.2e-4974.38Show/hide
Query:  MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTW-SPPSPP-QQELGRPIVPYYPNKFPPPPSR
        MES NPIFVF+LFIIM LLSLNLPSN A H IPSSLLSPP MPP TRPIVP+HPF F P PF+KTF+HTW  PPSPP QQEL RPIVPY+P KFPPPPSR
Subjt:  MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTW-SPPSPP-QQELGRPIVPYYPNKFPPPPSR

Query:  KQANPPLSYHIFSPPALPLPAKNLYMSEARRRPAPPPPPVNPPYVWPPKWIDRNSTPPPF
        KQANPP SYH F PPAL L A+ LYMSE  RR  PPPPP+  PY WP   I R S PPPF
Subjt:  KQANPPLSYHIFSPPALPLPAKNLYMSEARRRPAPPPPPVNPPYVWPPKWIDRNSTPPPF

A0A1S3CSG8 extensin-3-like1.0e-5085.16Show/hide
Query:  MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSR
        MESHNPIFVF+LFII+PLLSLNLPSNFA HYIPSSLLSPPPMP  TRPIVPYHPFIF PPPFKK F +HTW  PP PPQQ+L RPIVPYYP KFPPPPSR
Subjt:  MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSR

Query:  KQANPPLSYHIFSPPALPLPAKNLYMSE
        KQANPPLSYH F PP LPLPAK LYMSE
Subjt:  KQANPPLSYHIFSPPALPLPAKNLYMSE

A0A5A7UXN4 Extensin-3-like1.8e-3976.03Show/hide
Query:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL
        MPLLS NLPSNFATHYIP SLLSPP MPPTT+PIVPYHPFI  PPPFKKT KHTWSP S PQ+ELGRPIVPYYP KF PPP RK A+PP  YH+F P  L
Subjt:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL

Query:  PLPAKNLYMSEARR-RPAPPP
        P  AK L+MS AR+  PAPPP
Subjt:  PLPAKNLYMSEARR-RPAPPP

A0A5D3CI60 Extensin-3-like1.8e-3976.03Show/hide
Query:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL
        MPLLS NLPSNFATHYIP SLLSPP MPPTT+PIVPYHPFI  PPPFKKT KHTWSP S PQ+ELGRPIVPYYP KF PPP RK A+PP  YH+F P  L
Subjt:  MPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPAL

Query:  PLPAKNLYMSEARR-RPAPPP
        P  AK L+MS AR+  PAPPP
Subjt:  PLPAKNLYMSEARR-RPAPPP

A0A5D3CVI1 Extensin-3-like3.2e-3377.36Show/hide
Query:  MPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPALPLPAKNLYMSEARRRPAPPPPPVN
        MP  TRPIVPYHPFIF PPPFKK F +HTW  PP PPQQ+L RPIVPYYP KFPPPPSRKQANPPLSYH F PP LPLPAK LYMSE RR  A PPPP  
Subjt:  MPPTTRPIVPYHPFIFPPPPFKKTF-KHTW-SPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIFSPPALPLPAKNLYMSEARRRPAPPPPPVN

Query:  PPYVWP
         PY WP
Subjt:  PPYVWP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCACATAACCCCATTTTTGTGTTCTACCTCTTCATCATCATGCCATTACTCTCTTTAAATTTGCCATCAAATTTTGCTACACACTATATTCCCTCATCTCTTCT
GTCGCCGCCGCCGATGCCACCTACAACTCGACCTATAGTCCCTTATCACCCGTTTATATTCCCTCCTCCTCCATTTAAGAAAACTTTTAAGCACACATGGTCGCCACCGT
CGCCGCCGCAACAAGAATTGGGAAGGCCAATAGTTCCTTATTATCCCAATAAATTTCCACCACCTCCATCAAGAAAACAGGCCAATCCTCCTCTGAGCTACCATATCTTT
TCCCCACCAGCCTTGCCGCTGCCTGCCAAAAATCTTTACATGTCTGAGGCAAGAAGGCGGCCAGCGCCTCCACCACCGCCTGTAAATCCGCCATATGTGTGGCCGCCAAA
ATGGATCGACCGTAATTCAACCCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCACATAACCCCATTTTTGTGTTCTACCTCTTCATCATCATGCCATTACTCTCTTTAAATTTGCCATCAAATTTTGCTACACACTATATTCCCTCATCTCTTCT
GTCGCCGCCGCCGATGCCACCTACAACTCGACCTATAGTCCCTTATCACCCGTTTATATTCCCTCCTCCTCCATTTAAGAAAACTTTTAAGCACACATGGTCGCCACCGT
CGCCGCCGCAACAAGAATTGGGAAGGCCAATAGTTCCTTATTATCCCAATAAATTTCCACCACCTCCATCAAGAAAACAGGCCAATCCTCCTCTGAGCTACCATATCTTT
TCCCCACCAGCCTTGCCGCTGCCTGCCAAAAATCTTTACATGTCTGAGGCAAGAAGGCGGCCAGCGCCTCCACCACCGCCTGTAAATCCGCCATATGTGTGGCCGCCAAA
ATGGATCGACCGTAATTCAACCCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MESHNPIFVFYLFIIMPLLSLNLPSNFATHYIPSSLLSPPPMPPTTRPIVPYHPFIFPPPPFKKTFKHTWSPPSPPQQELGRPIVPYYPNKFPPPPSRKQANPPLSYHIF
SPPALPLPAKNLYMSEARRRPAPPPPPVNPPYVWPPKWIDRNSTPPPF