; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018574 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018574
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr03:12463055..12463534
RNA-Seq ExpressionPI0018574
SyntenyPI0018574
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031989.1 putative Retrotransposon protein [Cucumis melo var. makuwa]1.6e-4763.64Show/hide
Query:  FLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEFTI
        FLTKYHA+ D SNKEV+LR+ +K E+KF  DK+VE   II VLKARKL+K  H +YLA +++T A RN+P  +PIVCEY+DVFPKE+SGL P+REI+FTI
Subjt:  FLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEFTI

Query:  EVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK
        E+V  TT ISQTPYR+A  ELKELK QL+EL+EK YI+P TSPW  P+LF +++
Subjt:  EVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK

KAA0041141.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.5e-4561.54Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        M FLTKYHA+LDCSNKEV+LREL KFEVK+                        HT YLA ++DTQ ++++ +++PIV EYLDVFP+E+S L PK EIE 
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK
        TI+V+PRTT ISQTPYR+AP ELKELK+QLEELLEKGYI+PST PWG P+LFVK+K
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK

KAA0061410.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]6.5e-4472.09Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        M FLTKYHA+L+CSNKEV+LR+  KFE+KFVGDK V+LA I SVL ARKLIKKGHT YLA +VDTQ ++ +P  +PIVCEYLDVFP E++GLPPKREIE 
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQ
         IEV PRTT ISQT YR+ P ELKELK Q
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQ

TYK01558.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]9.0e-5470.97Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        MYFLTKYHA  DCSN EV+L+ELEKF+VK V +KKVELA+IISVLKA K I+K +  YL  IVDTQA+ N+P S+ IVC+YLDVF KEM+GLP KREI+F
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKR
        TIEVV  TT ISQT Y + P ELKELK+QLEELLE+ YI+P+TSPWGTP+LFVK+
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKR

WP_217833159.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]1.7e-4458.33Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        M FL+KY A +DC  KEV+ +  E  EV F GD+K+    +IS +KA KL+ KG   YLA +++ +  +  P+ +PIV E+LDVFP+E+SGLPP RE+EF
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK
        TI++VP TT ISQ PYR+AP ELKELK QL+EL++KGYIRPS SPWG PVLFVK+K
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK

TrEMBL top hitse value%identityAlignment
A0A5A7THJ0 DNA/RNA polymerases superfamily protein2.2e-4561.54Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        M FLTKYHA+LDCSNKEV+LREL KFEVK+                        HT YLA ++DTQ ++++ +++PIV EYLDVFP+E+S L PK EIE 
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK
        TI+V+PRTT ISQTPYR+AP ELKELK+QLEELLEKGYI+PST PWG P+LFVK+K
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK

A0A5A7V2B5 Gag protease polyprotein-like protein3.1e-4472.09Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        M FLTKYHA+L+CSNKEV+LR+  KFE+KFVGDK V+LA I SVL ARKLIKKGHT YLA +VDTQ ++ +P  +PIVCEYLDVFP E++GLPPKREIE 
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQ
         IEV PRTT ISQT YR+ P ELKELK Q
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQ

A0A5D3BRB8 DNA/RNA polymerases superfamily protein4.4e-5470.97Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        MYFLTKYHA  DCSN EV+L+ELEKF+VK V +KKVELA+IISVLKA K I+K +  YL  IVDTQA+ N+P S+ IVC+YLDVF KEM+GLP KREI+F
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKR
        TIEVV  TT ISQT Y + P ELKELK+QLEELLE+ YI+P+TSPWGTP+LFVK+
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKR

A0A5D3BSQ2 Uncharacterized protein5.3e-4460.26Show/hide
Query:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF
        M FLTKYH +LDCSNKEV+LREL KFEVK+                        HT YLA ++DT+ ++++ K++PIVCEYLDVFP+E+S L  K EIE 
Subjt:  MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEF

Query:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK
        TI+V+PRTT ISQTPYR+AP ELKELK+QLEELLEKG I+PST PWG P+LFVK+K
Subjt:  TIEVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK

A0A5D3D2P1 Putative Retrotransposon protein8.0e-4863.64Show/hide
Query:  FLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEFTI
        FLTKYHA+ D SNKEV+LR+ +K E+KF  DK+VE   II VLKARKL+K  H +YLA +++T A RN+P  +PIVCEY+DVFPKE+SGL P+REI+FTI
Subjt:  FLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEFTI

Query:  EVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK
        E+V  TT ISQTPYR+A  ELKELK QL+EL+EK YI+P TSPW  P+LF +++
Subjt:  EVVPRTTLISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTCCTCACCAAATATCACGCAGTATTGGATTGCTCTAATAAGGAGGTAATATTGAGAGAACTGGAAAAATTTGAAGTTAAATTTGTAGGCGACAAGAAAGTGGA
ATTAGCAAGTATAATATCAGTACTTAAGGCGAGGAAGTTGATTAAGAAGGGGCATACTACCTACCTTGCTCGCATAGTAGACACCCAGGCGATAAGGAATAACCCAAAAA
GTATACCTATAGTTTGCGAATACTTGGATGTGTTTCCAAAAGAAATGAGTGGATTACCCCCAAAAAGAGAGATTGAGTTTACGATTGAGGTTGTGCCTAGAACAACACTA
ATTTCTCAAACTCCTTATCGCATAGCACCCTGTGAGTTGAAGGAATTGAAAGAACAATTGGAGGAATTATTAGAGAAGGGTTATATTCGACCTAGTACCTCACCTTGGGG
AACCCCTGTTCTATTTGTGAAAAGAAAGATGGATCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATTTCCTCACCAAATATCACGCAGTATTGGATTGCTCTAATAAGGAGGTAATATTGAGAGAACTGGAAAAATTTGAAGTTAAATTTGTAGGCGACAAGAAAGTGGA
ATTAGCAAGTATAATATCAGTACTTAAGGCGAGGAAGTTGATTAAGAAGGGGCATACTACCTACCTTGCTCGCATAGTAGACACCCAGGCGATAAGGAATAACCCAAAAA
GTATACCTATAGTTTGCGAATACTTGGATGTGTTTCCAAAAGAAATGAGTGGATTACCCCCAAAAAGAGAGATTGAGTTTACGATTGAGGTTGTGCCTAGAACAACACTA
ATTTCTCAAACTCCTTATCGCATAGCACCCTGTGAGTTGAAGGAATTGAAAGAACAATTGGAGGAATTATTAGAGAAGGGTTATATTCGACCTAGTACCTCACCTTGGGG
AACCCCTGTTCTATTTGTGAAAAGAAAGATGGATCGATGA
Protein sequenceShow/hide protein sequence
MYFLTKYHAVLDCSNKEVILRELEKFEVKFVGDKKVELASIISVLKARKLIKKGHTTYLARIVDTQAIRNNPKSIPIVCEYLDVFPKEMSGLPPKREIEFTIEVVPRTTL
ISQTPYRIAPCELKELKEQLEELLEKGYIRPSTSPWGTPVLFVKRKMDR