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PI0018575 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018575
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGirdin-like
Genome locationchr03:22131366..22131641
RNA-Seq ExpressionPI0018575
SyntenyPI0018575
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]2.4e-2052.22Show/hide
Query:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        MLFIWISSHL+YPN FG P+IK             +FN+  W+P+      W+QF  H+T  E +WRAPW+PTS LTYRCG+L+F++LLG
Subjt:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

KGN65326.1 hypothetical protein Csa_019937 [Cucumis sativus]1.3e-2167.11Show/hide
Query:  MLFIWISSHLKYPNEFGCPRI-------------KDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLL
        MLFIWISSHLKYP+EFGCPRI             KDFN   WNP+TL+L+ W++F GHVTMEEIVWRAPWVPTS L
Subjt:  MLFIWISSHLKYPNEFGCPRI-------------KDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLL

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.1e-1646.67Show/hide
Query:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        MLFIWISSHL+YPN FG  +IK             +FN+  W+P+      W+QF  H+T  + +WRAPW+ TS LT+RCG+L+ + LLG
Subjt:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

XP_031739496.1 uncharacterized protein LOC116403043 [Cucumis sativus]1.2e-1136.67Show/hide
Query:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        +L+IWI SH+K+P EF CP+             I +F    WNP       WV F   ++ E+++W+A W+P   + YRCG    V LLG
Subjt:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

XP_031740432.1 uncharacterized protein LOC116403430 [Cucumis sativus]1.2e-1136.67Show/hide
Query:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        +L+IWI SH+K+P EF CP+             I +F    WNP       WV F   ++ E+++W+A W+P   + YRCG    V LLG
Subjt:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

TrEMBL top hitse value%identityAlignment
A0A0A0LZC9 Uncharacterized protein6.3e-2267.11Show/hide
Query:  MLFIWISSHLKYPNEFGCPRI-------------KDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLL
        MLFIWISSHLKYP+EFGCPRI             KDFN   WNP+TL+L+ W++F GHVTMEEIVWRAPWVPTS L
Subjt:  MLFIWISSHLKYPNEFGCPRI-------------KDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLL

A0A5A7T1W2 Retrotrans_gag domain-containing protein1.0e-1136.67Show/hide
Query:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        +L+IWI SH+K+P EF CPR             I +F    W+P       W+ F   +T E ++W+A W+P   + YRCG    V LLG
Subjt:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

A0A5A7T5S7 Girdin-like1.0e-1136.67Show/hide
Query:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        +L+IWI SH+K+P EF CPR             I +F    W+P       W+ F   +T E ++W+A W+P   + YRCG    V LLG
Subjt:  MLFIWISSHLKYPNEFGCPR-------------IKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

A0A5A7VHI3 Uncharacterized protein1.2e-2052.22Show/hide
Query:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        MLFIWISSHL+YPN FG P+IK             +FN+  W+P+      W+QF  H+T  E +WRAPW+PTS LTYRCG+L+F++LLG
Subjt:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

A0A5D3D0S2 Glial fibrillary acidic protein-like1.0e-1646.67Show/hide
Query:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG
        MLFIWISSHL+YPN FG  +IK             +FN+  W+P+      W+QF  H+T  + +WRAPW+ TS LT+RCG+L+ + LLG
Subjt:  MLFIWISSHLKYPNEFGCPRIK-------------DFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTCATATGGATTTCTAGTCATTTGAAATATCCGAACGAGTTTGGGTGTCCTCGGATAAAGGACTTCAATGCTACGTGCTGGAATCCTGAGACTCTAAACCTTAC
GTTTTGGGTGCAATTCCTAGGGCATGTCACAATGGAAGAAATAGTCTGGAGAGCGCCATGGGTGCCTACAAGTCTTTTGACATACCGCTGTGGACAATTGTCGTTTGTCG
CACTTTTAGGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTCATATGGATTTCTAGTCATTTGAAATATCCGAACGAGTTTGGGTGTCCTCGGATAAAGGACTTCAATGCTACGTGCTGGAATCCTGAGACTCTAAACCTTAC
GTTTTGGGTGCAATTCCTAGGGCATGTCACAATGGAAGAAATAGTCTGGAGAGCGCCATGGGTGCCTACAAGTCTTTTGACATACCGCTGTGGACAATTGTCGTTTGTCG
CACTTTTAGGCTTCTAA
Protein sequenceShow/hide protein sequence
MLFIWISSHLKYPNEFGCPRIKDFNATCWNPETLNLTFWVQFLGHVTMEEIVWRAPWVPTSLLTYRCGQLSFVALLGF