CuGenDBv2

Gene ID	PI0018590
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	ribosome production factor 1
Genome location	chr04:9039086..9042167
RNA-Seq Expression	PI0018590
Synteny	PI0018590
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]

1.7e-108

68.77

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEELPP KIPRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        ILPKVLITTCRFNST                            IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GHQPELVLTN TT LGLR GRLIQSL PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFESKENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK
          +ECGPRFT+KLISL HGTFDSKG EYEWVHK
Subjt:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK

XP_022943997.1 ribosome production factor 1 [Cucurbita moschata]

1.7e-103

65.36

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKNR ++PSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEE PP K PRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        I+PKVLITTCRFNS+                            IIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GH+PELVLTN TT LGLR GRLIQ+L PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFE KENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK
         +ECGPRFT+KLISL HGTFD+KG EYEWVHK
Subjt:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK

XP_022971273.1 ribosome production factor 1 [Cucurbita maxima]

1.3e-103

65.66

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKNR +IPSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEE PP K PRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        I+PKVLITTCRFNS+                            IIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GH+PELVLTN TT LGLR GRLIQ+L PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFE KENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK
         +ECGPRFT+KLISL HGTFD+KG EYEWVHK
Subjt:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]

2.1e-106

67.27

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEELPP KIPRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        ILPK+LITTCRFNST                            I+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GHQPELVLTN TT LGLR GRLIQSL PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFESKENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK
          +ECGPRFT+KLISL HGTFDSKG EYEWVHK
Subjt:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]

1.2e-106

67.57

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Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEE KNRGIIPSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEELPP KIPRTIENTREVDET+C+PDDEE+       +F S IKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        ILPKVLITTCRFNST                            IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
         HQPELVLTN TT LGLR GRLIQ+L PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFESKENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK
          +ECGPRFT+KLISL HGTFDSKG EYEWVHK
Subjt:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH42 Brix domain-containing protein

1.0e-106

67.27

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEELPP KIPRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        ILPK+LITTCRFNST                            I+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GHQPELVLTN TT LGLR GRLIQSL PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFESKENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK
          +ECGPRFT+KLISL HGTFDSKG EYEWVHK
Subjt:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK

A0A1S3B854 ribosome production factor 1 isoform X1

8.3e-109

68.77

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEELPP KIPRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        ILPKVLITTCRFNST                            IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GHQPELVLTN TT LGLR GRLIQSL PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFESKENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK
          +ECGPRFT+KLISL HGTFDSKG EYEWVHK
Subjt:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK

A0A5A7UHC7 Ribosome production factor 1 isoform X1

8.3e-109

68.77

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEELPP KIPRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        ILPKVLITTCRFNST                            IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GHQPELVLTN TT LGLR GRLIQSL PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFESKENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK
          +ECGPRFT+KLISL HGTFDSKG EYEWVHK
Subjt:  --RECGPRFTIKLISLHHGTFDSKGREYEWVHK

A0A6J1FUK1 ribosome production factor 1

8.1e-104

65.36

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKNR ++PSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEE PP K PRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        I+PKVLITTCRFNS+                            IIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GH+PELVLTN TT LGLR GRLIQ+L PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFE KENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK
         +ECGPRFT+KLISL HGTFD+KG EYEWVHK
Subjt:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK

A0A6J1I6C8 ribosome production factor 1

6.2e-104

65.66

Show/hide

Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD
        MGEEKKNR +IPSMIKNKEKRAEVHANLK QKKLEKRKRAKARDAAEKQA+E GEE PP K PRTIENTREVDETVC+PDDEE+       +F S IKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRD

Query:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT
        I+PKVLITTCRFNS+                            IIEYANA+DFTSL+VVHTSRRKLDGLLIIGLPEGP AHFKISNV       NHGNPT
Subjt:  ILPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPT

Query:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------
        GH+PELVLTN TT LGLR GRLIQ+L PQDPNFRGR  VTFHNQ+DFIFFRH R             YIFE KENK                        
Subjt:  GHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKP-----------------------

Query:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK
         +ECGPRFT+KLISL HGTFD+KG EYEWVHK
Subjt:  -RECGPRFTIKLISLHHGTFDSKGREYEWVHK

SwissProt top hits

e value

%identity

Alignment

Q5R631 Ribosome production factor 1

1.5e-43

39.07

Show/hide

Query:  GIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEV----ILFKFHSTIKRDILPKVLIT
        G   S IKNKE+R   H    + K+ +++++  A+   +K+    G++ PP  +P+TI+N R  DET   P+DEEV       +F S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEV----ILFKFHSTIKRDILPKVLIT

Query:  T-----------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV
        T           C   ST+I  ++                 A+DFT L+V++  R+  +GL++  LP GP AHFK+S+V           +PT H PE++
Subjt:  T-----------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV

Query:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFES-KENKPRECGPRFTIKLISLHHGTFDSKGREYEWV
        L N TT LG   GR+  SL P +P F GR   TFHNQ+D+IFFR             F +YIF S K+   +E GPRFT+KL SL  GTFDSK  EYEWV
Subjt:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFES-KENKPRECGPRFTIKLISLHHGTFDSKGREYEWV

Query:  HK
        HK
Subjt:  HK

Q5RJS9 Ribosome production factor 1

1.8e-44

40.59

Show/hide

Query:  GIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEV----ILFKFHSTIKRDILPKVLIT
        G   S IKNK++R  +    K+Q++ EK   AK +   E++A+  G++ PP  +P+TI+N R  DET   P+DEEV       +F S   R   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEV----ILFKFHSTIKRDILPKVLIT

Query:  T-----------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV
        T           C   ST+I  ++                 A+DFT L+V++  R+  +GL++  LP GP AHFK+S+V           +PT H PE++
Subjt:  T-----------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV

Query:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFES-KENKPRECGPRFTIKLISLHHGTFDSKGREYEWV
        L N TT LG   GR+  SL P +P F GR   TFHNQ+D+IFFR             F +YIF+S K+   +E GPRFT+KL SL  GTFDSK  EYEWV
Subjt:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFES-KENKPRECGPRFTIKLISLHHGTFDSKGREYEWV

Query:  HKV
        HKV
Subjt:  HKV

Q6IQU6 Ribosome production factor 1

3.1e-44

40.07

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Query:  SMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVIL----FKFHSTIKRDILPKVLITT---
        S IKNK++R  +   LK++K+ +KR   K +   E++A++  ++ PP ++P+TIEN R  DET   P+DEEV       +F +   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVIL----FKFHSTIKRDILPKVLITT---

Query:  --------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELVLTNI
                C   +T+I +A                  ++ FT LMV++  R+  +G+++  LP+GP AHFK+S+V           NPT H PE++L N 
Subjt:  --------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELVLTNI

Query:  TTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVHK
        TT LG   GRL  +L P DP F GR   TFHNQ+DFIFFR  RY + +             K+   +E GPRFT+KL SL  GTFDSK  EYEWVHK
Subjt:  TTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVHK

Q7TND5 Ribosome production factor 1

1.2e-43

39.07

Show/hide

Query:  GIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEV----ILFKFHSTIKRDILPKVLIT
        G   S IKNK++R   H    + K+ +++++  A+   +K+    G++ PP  +P+TI+N R  DET   P+DEEV       +F S   R   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEV----ILFKFHSTIKRDILPKVLIT

Query:  T-----------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV
        T           C   ST+I  ++                 A+DFT L+V++  R+  +GL++  LP GP AHFK+S+V           +PT H PE++
Subjt:  T-----------CRFNSTIIEYAN-----------------AKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV

Query:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFES-KENKPRECGPRFTIKLISLHHGTFDSKGREYEWV
        L N TT LG   GR+  SL P +P F GR   TFHNQ+D+IFFR             F +YIF+S K+   +E GPRFT+KL SL  GTFDSK  EYEWV
Subjt:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFES-KENKPRECGPRFTIKLISLHHGTFDSKGREYEWV

Query:  HK
        HK
Subjt:  HK

Q8AVP1 Ribosome production factor 1

6.2e-45

40.2

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Query:  SMIKNKEKRAEVHANLKKQKKLEK----RKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVIL----FKFHSTIKRDILPKVLIT
        S IKNK++R  +   LK++K+ EK    +KR K R+A        G++ PP  +P+TIEN R  DET   P DEEV L     +F     +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKKQKKLEK----RKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVIL----FKFHSTIKRDILPKVLIT

Query:  T--------CRFN--------------------STIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV
        T         RF                       II    ++D+T L+V++  R+  +GL++  LP+GP AHFKISNV            PT H+PE++
Subjt:  T--------CRFN--------------------STIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV--------NHGNPTGHQPELV

Query:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVH
        L N TT LG   GR+  SL P DP+F GR   TFHNQ+D+IFFR+ RY +               K+   +E GPRFT+KL SL  GTFDSK  EYEWVH
Subjt:  LTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVH

Query:  K
        K
Subjt:  K

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

2.8e-16

28.1

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Query:  IPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVILFKFHSTIKRDILPKVLITTCRFNS
        IP+ ++N      V A L+++  LE +  A  R   + +     E  P +     +  +R     + R   E   +F     I R           +  S
Subjt:  IPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVILFKFHSTIKRDILPKVLITTCRFNS

Query:  TIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV----------NHGNPTGHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDV
         IIE A + DFT +++VH  R   DGL+I  LP GP A+F + NV          + G      P L+  N TT +G R G +++ + P  P    +  V
Subjt:  TIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV----------NHGNPTGHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDV

Query:  TFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVHKVPYIS
        TF NQ D+I FR+  Y   +             K  + +E GPRF ++L  +  GT +    E EWV + PY++
Subjt:  TFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVHKVPYIS

AT4G01560.1 Ribosomal RNA processing Brix domain protein

2.3e-87

56.74

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Query:  GEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRDI
        G EK+N  I+PSMIKNK+KR++V+A  K +KKLEK+K+ +ARDAAEK+A+E GEE P   IP+TIENTRE DETVCRPDDEE+       +F+  ++R+I
Subjt:  GEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVI----LFKFHSTIKRDI

Query:  LPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPTG
         PKVL+TTCRFNST                            I+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GP AHFK+SN+       NHGNPT 
Subjt:  LPKVLITTCRFNST----------------------------IIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNV-------NHGNPTG

Query:  HQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKEN----------KPR--ECGPRFTIKLI
        HQPELVL N TT LG R GR  QSL P DPNFRGR  VTFHNQ+DFIFFRH R             YIFE+KE+          KPR  ECGPRFT+KL+
Subjt:  HQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYDNACFYFLKYIFESKEN----------KPR--ECGPRFTIKLI

Query:  SLHHGTFDSKGREYEWVHK
        +L HGTFD+KG E+EWVHK
Subjt:  SLHHGTFDSKGREYEWVHK

Sequences

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CDS sequence

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ATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCAAACCTCAAGAAGCAGAAGAAGCTTGAGAAACG
CAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTGTTGAACATGGAGAAGAACTTCCTCCTATGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGACG
AGACTGTTTGCAGACCTGATGATGAAGAGGTTATTCTTTTTAAATTTCATTCCACTATAAAGCGCGACATTTTGCCGAAAGTTCTAATTACTACCTGTCGTTTTAATTCT
ACAATTATAGAATATGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGGAGAAAATTGGATGGACTTTTAATTATTGGCTTACCTGAGGGACCTAT
TGCCCATTTCAAGATTTCAAATGTTAATCATGGAAATCCAACCGGTCATCAGCCAGAACTTGTATTGACCAACATCACAACATGCCTTGGTCTTCGTTTTGGAAGATTAA
TACAATCACTAGTCCCTCAAGATCCCAATTTTCGCGGTCGGTGGGATGTAACTTTTCATAACCAACAAGATTTTATATTTTTTCGGCATCAGCGGTATTTTTACTATGAT
AATGCATGTTTTTACTTTCTCAAATACATTTTTGAAAGCAAGGAAAATAAACCAAGGGAATGTGGTCCTCGTTTCACAATAAAATTGATCAGTTTACATCACGGAACTTT
CGATTCAAAAGGCAGGGAATACGAATGGGTTCATAAGGTACCTTACATCTCTTACAATCCAAGGGGTTAG

mRNA sequence

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Protein sequence

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MGEEKKNRGIIPSMIKNKEKRAEVHANLKKQKKLEKRKRAKARDAAEKQAVEHGEELPPMKIPRTIENTREVDETVCRPDDEEVILFKFHSTIKRDILPKVLITTCRFNS
TIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPIAHFKISNVNHGNPTGHQPELVLTNITTCLGLRFGRLIQSLVPQDPNFRGRWDVTFHNQQDFIFFRHQRYFYYD
NACFYFLKYIFESKENKPRECGPRFTIKLISLHHGTFDSKGREYEWVHKVPYISYNPRG

PI0018590 (gene) of Melon (PI 482460) v1 genome