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PI0018643 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018643
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA ligase
Genome locationchr07:24203190..24203927
RNA-Seq ExpressionPI0018643
SyntenyPI0018643
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031776.1 hypothetical protein SDJN02_05817, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-4281.03Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSI CFR DH G+ LENE G+SSP TP SP LKS+A++FPELRGMCR+LVARI  SRRRYHHS DFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFTSRLPASP
        DEFPIRDF SRLPASP
Subjt:  DEFPIRDFTSRLPASP

KGN55462.1 hypothetical protein Csa_012581 [Cucumis sativus]1.7e-4682.91Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVRD
        MFNHYNPFSFTHKLKS I CFRPDHD EL +N      P++PTSPALKS+ SD PELRGMCRSLVARISW SRRRYHHS DFRYDPSSYALNFEDEQ+R 
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVRD

Query:  DDEFPIRDFTSRLPASP
        DDEFPIRDFTSRLPASP
Subjt:  DDEFPIRDFTSRLPASP

XP_008452891.1 PREDICTED: uncharacterized protein LOC103493778 [Cucumis melo]6.6e-4683.9Show/hide
Query:  MFNHYNPFSFTHKLKSSI-RCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVR
        MFNHYNPFSFTHKLKSSI  CFRPDHD EL ENED N        PALKS+ SD PELRGMCRSLVARISW SRRRYHHS DFRYDPSSYALNFEDEQVR
Subjt:  MFNHYNPFSFTHKLKSSI-RCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVR

Query:  DDDEFPIRDFTSRLPASP
        DD+EFPIRDFTSRLPASP
Subjt:  DDDEFPIRDFTSRLPASP

XP_022940408.1 uncharacterized protein LOC111446022 [Cucurbita moschata]1.5e-4281.03Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSI CFR DH G+ LENE G+SSP TP SP LKS+A++FPELRGMCR+LVARI  SRRRYHHS DFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFTSRLPASP
        DEFPIRDF SRLPASP
Subjt:  DEFPIRDFTSRLPASP

XP_023523424.1 uncharacterized protein LOC111787637 [Cucurbita pepo subsp. pepo]2.0e-4281.03Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSI CFR DH G+ LENED +SSP TP SP LKS+A++FPELRGMCR+LVARI  SRRRYHHS DFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFTSRLPASP
        DEFPIRDF SRLPASP
Subjt:  DEFPIRDFTSRLPASP

TrEMBL top hitse value%identityAlignment
A0A0A0L4E2 Uncharacterized protein8.5e-4782.91Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVRD
        MFNHYNPFSFTHKLKS I CFRPDHD EL +N      P++PTSPALKS+ SD PELRGMCRSLVARISW SRRRYHHS DFRYDPSSYALNFEDEQ+R 
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVRD

Query:  DDEFPIRDFTSRLPASP
        DDEFPIRDFTSRLPASP
Subjt:  DDEFPIRDFTSRLPASP

A0A1S3BVQ9 uncharacterized protein LOC1034937783.2e-4683.9Show/hide
Query:  MFNHYNPFSFTHKLKSSI-RCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVR
        MFNHYNPFSFTHKLKSSI  CFRPDHD EL ENED N        PALKS+ SD PELRGMCRSLVARISW SRRRYHHS DFRYDPSSYALNFEDEQVR
Subjt:  MFNHYNPFSFTHKLKSSI-RCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVR

Query:  DDDEFPIRDFTSRLPASP
        DD+EFPIRDFTSRLPASP
Subjt:  DDDEFPIRDFTSRLPASP

A0A5A7VBS3 DNA ligase3.2e-4683.9Show/hide
Query:  MFNHYNPFSFTHKLKSSI-RCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVR
        MFNHYNPFSFTHKLKSSI  CFRPDHD EL ENED N        PALKS+ SD PELRGMCRSLVARISW SRRRYHHS DFRYDPSSYALNFEDEQVR
Subjt:  MFNHYNPFSFTHKLKSSI-RCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISW-SRRRYHHSVDFRYDPSSYALNFEDEQVR

Query:  DDDEFPIRDFTSRLPASP
        DD+EFPIRDFTSRLPASP
Subjt:  DDDEFPIRDFTSRLPASP

A0A6J1FP70 uncharacterized protein LOC1114460227.4e-4381.03Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSI CFR DH G+ LENE G+SSP TP SP LKS+A++FPELRGMCR+LVARI  SRRRYHHS DFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFTSRLPASP
        DEFPIRDF SRLPASP
Subjt:  DEFPIRDFTSRLPASP

A0A6J1J1H3 uncharacterized protein LOC1114804174.1e-4177.59Show/hide
Query:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD
        M N Y+PFSFT KLKSSIRCFR DH  +  E+ED +SSP TP SP LKS+A++FPE+RGMCR+LVARI   RRRYHHS DFRYDPSSYALNFEDEQVRDD
Subjt:  MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD

Query:  DEFPIRDFTSRLPASP
        DEFPIRDF SRLPASP
Subjt:  DEFPIRDFTSRLPASP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G11070.1 unknown protein4.1e-0940.16Show/hide
Query:  HKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPA--LKSIASDFPELRGMCRSLVARISWSRR-----------RYHHSV----DFRYDPSSYALNFED
        H+++S I C   +   E      G     TP SP   LKS A +  ELR  CR + +RI  + R            +HHS     DF YDP SYALNFED
Subjt:  HKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPA--LKSIASDFPELRGMCRSLVARISWSRR-----------RYHHSV----DFRYDPSSYALNFED

Query:  EQVRDDDEFPIRDFTSRLPASP
          VR DD+    +FT+RLP SP
Subjt:  EQVRDDDEFPIRDFTSRLPASP

AT5G35090.1 unknown protein2.9e-0743.08Show/hide
Query:  CRSLVARI--------SWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD-DEFPIRDFTSRLPASP
        C+SL+ R+           +    H+ DF YDPSSYALNF+     D+ D FP+R+F++RLP SP
Subjt:  CRSLVARI--------SWSRRRYHHSVDFRYDPSSYALNFEDEQVRDD-DEFPIRDFTSRLPASP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAACCACTACAATCCATTTTCATTTACTCACAAGCTCAAATCCTCAATCCGTTGTTTCCGCCCCGATCACGATGGCGAATTACTAGAAAACGAAGACGGTAATTC
TTCTCCAACAACCCCTACATCTCCTGCTCTCAAATCAATTGCCTCTGACTTCCCGGAGCTCCGTGGAATGTGCCGGAGTCTCGTCGCTCGGATCAGCTGGAGTCGCCGAC
GCTACCATCACTCTGTTGATTTTCGATACGATCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAAGTTCGAGATGATGATGAGTTTCCAATTAGGGATTTCACTTCG
AGATTGCCGGCGTCGCCGCGGTAA
mRNA sequenceShow/hide mRNA sequence
CACTCTTATCGGTCCCCTTCCATTCTTCATCCTTCTTTTTCTACCATAATTCTCTATAAATATCTCTTCCATTTCTCTTCCCCAGTTCATCATTACTACTTCTCACCTCT
CATCCATTTTTCATTACAAAAGTTTTCTTCTTCACCATGTTCAACCACTACAATCCATTTTCATTTACTCACAAGCTCAAATCCTCAATCCGTTGTTTCCGCCCCGATCA
CGATGGCGAATTACTAGAAAACGAAGACGGTAATTCTTCTCCAACAACCCCTACATCTCCTGCTCTCAAATCAATTGCCTCTGACTTCCCGGAGCTCCGTGGAATGTGCC
GGAGTCTCGTCGCTCGGATCAGCTGGAGTCGCCGACGCTACCATCACTCTGTTGATTTTCGATACGATCCTTCCAGCTATGCCCTTAATTTCGAGGACGAACAAGTTCGA
GATGATGATGAGTTTCCAATTAGGGATTTCACTTCGAGATTGCCGGCGTCGCCGCGGTAAATCTCATGCGATTTTGAAGCCATGGGATTGGGGATCTACAGAGTCTCTAC
CCATTGATTGTAACTGTGTATATACCGTAATTTGCAAAAGGTGTTATTCGTCGAGCTAAATGTATAGATATCTAAAAAGCTCTCTAATTATATATTCTTTCTATTGTTAA
TAATAATAATAATAATAATAACTGATTATGTTCGTCTCTAATTTCGTTTAATTTCAATAAACCCTATACTAAAAAAAA
Protein sequenceShow/hide protein sequence
MFNHYNPFSFTHKLKSSIRCFRPDHDGELLENEDGNSSPTTPTSPALKSIASDFPELRGMCRSLVARISWSRRRYHHSVDFRYDPSSYALNFEDEQVRDDDEFPIRDFTS
RLPASPR