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PI0018652 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018652
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic
Genome locationchr11:27104203..27105861
RNA-Seq ExpressionPI0018652
SyntenyPI0018652
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004153120.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucumis sativus]5.6e-5294.29Show/hide
Query:  AASSTSINIFPFPSYQIVRSERKSSPN-IIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
        AA+STSINIFPFPSYQI RS+RKSSPN II+PFA LPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
Subjt:  AASSTSINIFPFPSYQIVRSERKSSPN-IIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE

Query:  QRGER
        QRGER
Subjt:  QRGER

XP_008459263.1 PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Cucumis melo]2.5e-5292.38Show/hide
Query:  AAASSTSINIFPFPSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
        A ++STSINIFPFPSYQIVRS+ KSSPNI +PFA LPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
Subjt:  AAASSTSINIFPFPSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE

Query:  QRGER
        QRGER
Subjt:  QRGER

XP_022963874.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic [Cucurbita moschata]1.8e-3471.15Show/hide
Query:  SSTSINIFPFP--SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
        S+ S + FPFP   + I+   +  S    IPFA  P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGGLTPEQ
Subjt:  SSTSINIFPFP--SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ

Query:  RGER
        RGER
Subjt:  RGER

XP_023521952.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic-like [Cucurbita pepo subsp. pepo]2.4e-3466.97Show/hide
Query:  AAASSTSINIFPFP----SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        ++ S ++ + FPFP     + I+   +  S    IPFA  P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AAASSTSINIFPFP----SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

XP_038901776.1 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic isoform X1 [Benincasa hispida]3.5e-3872.97Show/hide
Query:  MAAASSTSINIFPFPSYQIVRS-----ERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGK
        MA A ++S NIFPF  Y++VRS      +  S NI +  A    S LLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCF+CQGFGLKSCP+CGK
Subjt:  MAAASSTSINIFPFPSYQIVRS-----ERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGK

Query:  GGLTPEQRGER
        GGLTPEQRGER
Subjt:  GGLTPEQRGER

TrEMBL top hitse value%identityAlignment
A0A0A0LIM5 Uncharacterized protein2.7e-5294.29Show/hide
Query:  AASSTSINIFPFPSYQIVRSERKSSPN-IIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
        AA+STSINIFPFPSYQI RS+RKSSPN II+PFA LPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
Subjt:  AASSTSINIFPFPSYQIVRSERKSSPN-IIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE

Query:  QRGER
        QRGER
Subjt:  QRGER

A0A1S3C9W1 protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic1.2e-5292.38Show/hide
Query:  AAASSTSINIFPFPSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
        A ++STSINIFPFPSYQIVRS+ KSSPNI +PFA LPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE
Subjt:  AAASSTSINIFPFPSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPE

Query:  QRGER
        QRGER
Subjt:  QRGER

A0A6J1DHW0 uncharacterized protein LOC1110202034.8e-3366.96Show/hide
Query:  AASSTSIN-IFPF-------PSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCG
        + SS +IN IFPF       P   ++    K      I F    T + LPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCP+CG
Subjt:  AASSTSIN-IFPF-------PSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCG

Query:  KGGLTPEQRGER
         GGLTPEQRGER
Subjt:  KGGLTPEQRGER

A0A6J1HLG5 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic8.8e-3571.15Show/hide
Query:  SSTSINIFPFP--SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ
        S+ S + FPFP   + I+   +  S    IPFA  P  + LPKRCQ CGGKGAIDCPGCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGGLTPEQ
Subjt:  SSTSINIFPFP--SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQ

Query:  RGER
        RGER
Subjt:  RGER

A0A6J1JSI3 protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic9.7e-3466.06Show/hide
Query:  AAASSTSINIFPFP----SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG
        ++ S ++ + FPFP     + I+   +  S    IPFA  P  + LPKRCQ CGGKGAIDC GCKGTG+NKKNGNIFERWKCFECQGFGLKSCP CGKGG
Subjt:  AAASSTSINIFPFP----SYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGG

Query:  LTPEQRGER
        LTPEQRGER
Subjt:  LTPEQRGER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22630.1 unknown protein4.5e-3185.48Show/hide
Query:  KRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER
        K C+ CG KGAI+CPGCKGTGKNKKNGN+FERWKCF+CQGFG+KSCP+CGKGGLTPEQRGER
Subjt:  KRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTGCTAGCTCTACCTCTATCAACATCTTCCCATTTCCCTCCTATCAAATTGTTAGAAGTGAAAGAAAATCATCACCCAACATTATTATTCCTTTTGCTGTACT
ACCAACATCTAATTTGCTGCCCAAAAGATGCCAGAAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAATAAGAAAAACGGAAACATCT
TCGAGCGATGGAAATGTTTTGAGTGTCAAGGATTTGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGTCTCACCCCAGAACAAAGGGGAGAAAGATAA
mRNA sequenceShow/hide mRNA sequence
GTTGTGAGATATAGATCAGAAGAAAAGAAAAGTATTAGCAAAGACCCAAAGGCGGCACACACAAGATTAATTGAAAATGGCCGCTGCTAGCTCTACCTCTATCAACATCT
TCCCATTTCCCTCCTATCAAATTGTTAGAAGTGAAAGAAAATCATCACCCAACATTATTATTCCTTTTGCTGTACTACCAACATCTAATTTGCTGCCCAAAAGATGCCAG
AAGTGTGGAGGTAAAGGGGCCATTGATTGTCCTGGATGTAAGGGAACGGGAAAGAATAAGAAAAACGGAAACATCTTCGAGCGATGGAAATGTTTTGAGTGTCAAGGATT
TGGATTGAAGAGTTGTCCTCAATGTGGAAAAGGAGGTCTCACCCCAGAACAAAGGGGAGAAAGATAAATGCATACAACAACTGCTCCTAAACCCTTTATATATTACATAT
ACTTTCAATTTCGTATTTTTCCTAATCTCATAAGGTTTCTAATTTTTTTTATATTTTGTATATTAAATGTGTGTTTGATTTTCTTTTTTCATTTTTAACTTTGGCTATTG
CGAATATTTTATACTCAACACATACTAACATTAATTATTCATAGTTTAAACTAAGATGTTGAGCTTATTCAAATTATTTAATGGATTAAAA
Protein sequenceShow/hide protein sequence
MAAASSTSINIFPFPSYQIVRSERKSSPNIIIPFAVLPTSNLLPKRCQKCGGKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPQCGKGGLTPEQRGER