; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0018661 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0018661
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr12:20234893..20235787
RNA-Seq ExpressionPI0018661
SyntenyPI0018661
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045193.1 hypothetical protein E6C27_scaffold30G001940 [Cucumis melo var. makuwa]4.0e-3146.94Show/hide
Query:  NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDET
        N   +AH+L+ PI  Y + + Y FN GI YP FG NARF++KP ML MIQ   QFGG+  EDP +HI+S Y +C+SFH+P +S E L    F  TL+D+ 
Subjt:  NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDET

Query:  KRWANALEDGEVTQQTADAVF--VGGMLKSSYNQIKATLDTMANNNE
        K+W   LE    TQ   D +F   G +++ +Y QIK TLD M+ N+E
Subjt:  KRWANALEDGEVTQQTADAVF--VGGMLKSSYNQIKATLDTMANNNE

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.0e-3164.81Show/hide
Query:  NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEK
        N +  P    A   N  Y+A D DRPIRSY + N Y+FNPGIAYP F EN RFEIK VMLQ+IQNAGQF  HP +DPH++IR+FYSICASFHMPGIS E+
Subjt:  NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEK

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.4e-3645.56Show/hide
Query:  MSDGEQPQFELNPEIKRTFRCNRRRARQRQARR-------MENNRRNAPPPYVAPEPNA----------AYMAHDLDRPIRSYVASNFYNFNPGIAYPVF
        MS+G+ P F+++PEI+RTFR   R+ +QR++ +        + N+  AP   V    NA            +AHD +RP+R Y + N YNF PGI  P F
Subjt:  MSDGEQPQFELNPEIKRTFRCNRRRARQRQARR-------MENNRRNAPPPYVAPEPNA----------AYMAHDLDRPIRSYVASNFYNFNPGIAYPVF

Query:  GENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT
          N RFE+KPVMLQM+Q AGQFGG  GEDPH H++SF  IC++F M G+  + +R  LFP +LRDE ++WA + E GE+T
Subjt:  GENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT

XP_038874908.1 uncharacterized protein LOC120067411 [Benincasa hispida]7.5e-3043.87Show/hide
Query:  NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDET
        N   MA+   RP+R Y +   Y+F+P I YP   +  RFE+K VMLQM+Q AGQF G  GEDPH H++ F   C SF +PGI+PE +R +LFP +LRD+ 
Subjt:  NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDET

Query:  KRWANALEDGEVTQQTADAVFVGGMLKSSYNQIKATLDTMANNNEEWDEDNLGNR
        K+W    +    +Q  ADA   G ++  SY + K  LD +A +N EW +D    R
Subjt:  KRWANALEDGEVTQQTADAVFVGGMLKSSYNQIKATLDTMANNNEEWDEDNLGNR

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]1.6e-3247.02Show/hide
Query:  MSDGEQPQFELNPEIKRTF--RCNRRRARQRQARRMENNRRNAPPPYVA---PEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVM
        MS    P+FE NPEI  TF  R ++ RA +R+    +NN   AP        P  +  ++A D + PIR+Y A N Y+F+PGI+ P+  ENARFEIKPVM
Subjt:  MSDGEQPQFELNPEIKRTF--RCNRRRARQRQARRMENNRRNAPPPYVA---PEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVM

Query:  LQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT
        +QMIQN  QF     E+PH H+  F  +C++F +PGI+P  +R  LFP TLRD+ KRWA++LE  E+T
Subjt:  LQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVT

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein1.9e-3146.94Show/hide
Query:  NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDET
        N   +AH+L+ PI  Y + + Y FN GI YP FG NARF++KP ML MIQ   QFGG+  EDP +HI+S Y +C+SFH+P +S E L    F  TL+D+ 
Subjt:  NAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDET

Query:  KRWANALEDGEVTQQTADAVF--VGGMLKSSYNQIKATLDTMANNNE
        K+W   LE    TQ   D +F   G +++ +Y QIK TLD M+ N+E
Subjt:  KRWANALEDGEVTQQTADAVF--VGGMLKSSYNQIKATLDTMANNNE

A0A5A7UDN8 Uncharacterized protein1.7e-2763.92Show/hide
Query:  NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGIS
        N +N P      E N AY+AHDLD+PI+SY + N Y+FNPGIAY  FGEN  FEIK +ML M QNAGQFGGHP EDP++HIR+FY ICASF+M  IS
Subjt:  NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 15.1e-3264.81Show/hide
Query:  NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEK
        N +  P    A   N  Y+A D DRPIRSY + N Y+FNPGIAYP F EN RFEIK VMLQ+IQNAGQF  HP +DPH++IR+FYSICASFHMPGIS E+
Subjt:  NRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEK

Query:  LRFALFPL
        LRF  F L
Subjt:  LRFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 14.9e-2762.75Show/hide
Query:  MENNRRNAPPPYVAP--EPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPG
        M +N+ N  P   A   + N   +AH+LD PIR+Y + N Y+FN GIAY VFGENA FE+KPVMLQMIQ AGQF G+ GEDPHEHI+SFYSICASFHM  
Subjt:  MENNRRNAPPPYVAP--EPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPG

Query:  IS
         S
Subjt:  IS

U5CUK7 Uncharacterized protein4.0e-2148.7Show/hide
Query:  EPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRD
        E N   +A D  R IR Y A  F   N GI  P   +   FE+KPVM QM+Q  GQFGG P EDPH HIRSF  +  SF + G+S E LR  LFP +LRD
Subjt:  EPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPGEDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRD

Query:  ETKRWANALEDGEVT
          + W N L    VT
Subjt:  ETKRWANALEDGEVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGACGGTGAACAACCGCAATTCGAACTTAACCCTGAAATTAAGCGAACCTTTCGGTGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAA
TAGAAGAAATGCCCCTCCGCCGTATGTTGCCCCAGAACCAAATGCTGCCTACATGGCACATGACTTGGATAGGCCGATTAGATCTTATGTGGCATCTAACTTCTACAACT
TTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGCCGGACAATTCGGCGGTCACCCTGGA
GAGGATCCACATGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATTTCACCTGAAAAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAG
GGATGAGACGAAGAGGTGGGCCAACGCTTTGGAAGATGGCGAGGTTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTAAAGAGCTCCTACAACCAGATTA
AGGCGACGCTGGATACAATGGCCAACAACAATGAAGAATGGGATGAAGATAATTTAGGCAATCGCCGAGGAGGACGATCAAGAGGTGATAAAGGCATGGATAAGAGTGTC
GTGGTGGCGTTGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGACGGTGAACAACCGCAATTCGAACTTAACCCTGAAATTAAGCGAACCTTTCGGTGTAATCGGCGAAGAGCGAGGCAGAGACAAGCTAGAAGAATGGAAAACAA
TAGAAGAAATGCCCCTCCGCCGTATGTTGCCCCAGAACCAAATGCTGCCTACATGGCACATGACTTGGATAGGCCGATTAGATCTTATGTGGCATCTAACTTCTACAACT
TTAACCCAGGGATCGCTTACCCTGTGTTCGGCGAAAACGCTAGGTTTGAAATCAAACCTGTCATGCTTCAGATGATTCAGAACGCCGGACAATTCGGCGGTCACCCTGGA
GAGGATCCACATGAGCATATTAGGAGTTTTTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATTTCACCTGAAAAATTGAGATTCGCTCTCTTCCCGTTAACTCTGAG
GGATGAGACGAAGAGGTGGGCCAACGCTTTGGAAGATGGCGAGGTTACACAGCAGACTGCTGATGCTGTGTTTGTAGGCGGTATGCTAAAGAGCTCCTACAACCAGATTA
AGGCGACGCTGGATACAATGGCCAACAACAATGAAGAATGGGATGAAGATAATTTAGGCAATCGCCGAGGAGGACGATCAAGAGGTGATAAAGGCATGGATAAGAGTGTC
GTGGTGGCGTTGCAATGA
Protein sequenceShow/hide protein sequence
MSDGEQPQFELNPEIKRTFRCNRRRARQRQARRMENNRRNAPPPYVAPEPNAAYMAHDLDRPIRSYVASNFYNFNPGIAYPVFGENARFEIKPVMLQMIQNAGQFGGHPG
EDPHEHIRSFYSICASFHMPGISPEKLRFALFPLTLRDETKRWANALEDGEVTQQTADAVFVGGMLKSSYNQIKATLDTMANNNEEWDEDNLGNRRGGRSRGDKGMDKSV
VVALQ